BP921316 |
Clone id |
YMU001_000148_D04 |
Library |
YMU01 |
Length |
437 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000148_D04. |
Accession |
BP921316 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
AGGTACTCTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTGCCG CGGGCACGACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAA GGTCCCCTCAATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCT GAACCCAGGTCACGTACCGCTTTAATGGGCGAACAGTCCAACCCTTGGGACGTACTACCG CCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAACTCTTG GGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCCTTCCAC TTGGAACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACTGGTAGGTCTCGCAG TCAAGCTCCCTTCTGCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9PLI5 |
Definition |
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum |
Align length |
80 |
Score (bit) |
86.3 |
E-value |
5.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921316|Adiantum capillus-veneris mRNA, clone: YMU001_000148_D04. (437 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi... 86 5e-17 sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal regio... 35 0.18 sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia ... 32 1.5 sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit... 31 2.0 sp|Q55012|PTLS_STRS3 Pentalenene synthase OS=Streptomyces sp. (s... 30 3.4 sp|Q9PQ33|SYFB_UREPA Phenylalanyl-tRNA synthetase beta chain OS=... 30 4.4 sp|A8LPD4|MUTS_DINSH DNA mismatch repair protein mutS OS=Dinoros... 30 5.7 sp|Q9ZGE6|BCHD_HELMO Magnesium-chelatase 67 kDa subunit OS=Helio... 29 7.5 sp|P18269|8511_TRYCR Sialidase 85-1.1 OS=Trypanosoma cruzi GN=SA... 29 7.5 sp|P47988|TEA1_YEAST TY1 enhancer activator OS=Saccharomyces cer... 29 9.8 sp|Q61136|PRP4B_MOUSE Serine/threonine-protein kinase PRP4 homol... 29 9.8 sp|P29518|BT1_MAIZE Protein brittle-1, chloroplastic/amyloplasti... 29 9.8
>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum GN=TC_0114 PE=4 SV=2 Length = 122
Score = 86.3 bits (212), Expect = 5e-17 Identities = 44/80 (55%), Positives = 47/80 (58%) Frame = +1
Query: 139 APAPDMDRTVSRRSEPRSRTALMGEQSNPWDVLPPQVAKSRHRGAKPSRRCXXXXXXXXX 318 AP D D+TVSRR EP SRTAL+GEQ NPWD+L PQ A SRHRGAKP RR Sbjct: 43 APTKDRDQTVSRRFEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLL 102
Query: 319 XXXXXXXXXRRPFHLEPSDH 378 RR FH P DH Sbjct: 103 SPEYLLSVKRRRFHFPPPDH 122
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog OS=Mus musculus GN=Wbscr16 PE=2 SV=1 Length = 461
Score = 34.7 bits (78), Expect = 0.18 Identities = 19/40 (47%), Positives = 23/40 (57%) Frame = -1
Query: 146 AGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGAD 27 A ARALRGP P P R H W + R+R +R A+ AD Sbjct: 3 AAARALRGPRPRWPTPAREH-WTPAGRSRSRREAAEAEAD 41
>sp|O10312|Y054_NPVOP Uncharacterized 42.5 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=ORF58 PE=4 SV=1 Length = 378
Score = 31.6 bits (70), Expect = 1.5 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = -2
Query: 379 SDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLDVGSSPPGAVVRPKGWTVRPLK 200 S+P + S + A + TLG + RV+ L G +PPG ++ P V+ + Sbjct: 246 SNPFIISENSSASVVLRTLGKCPDNPERVNC----CKLSYGGAPPGHLMCPPRAIVKKIY 301
Query: 199 RYVTWVQN 176 RYV W N Sbjct: 302 RYVNWASN 309
>sp|Q8C7E9|CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2 Length = 632
Score = 31.2 bits (69), Expect = 2.0 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%) Frame = -1
Query: 242 GGSTSQGLDCSPIKA--VRDLGSERRETVRSISGAGARA----LRGPFPSTRGP 99 GG S+G++ P++ + G ERR ++ G A +RGP PS+RGP Sbjct: 421 GGRESRGMETRPMETEVLEPRGMERRMETCAMETRGMDARGLEMRGPGPSSRGP 474
>sp|Q55012|PTLS_STRS3 Pentalenene synthase OS=Streptomyces sp. (strain UC5319) PE=1 SV=4 Length = 337
Score = 30.4 bits (67), Expect = 3.4 Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 22/127 (17%) Frame = -1
Query: 353 GRRSTDKSYSRDNRLIFPKS-----------SHRREG---LAPRCRLFATWGGSTSQGLD 216 GR+S D + + +L +P+S H R G LA R AT G G+D Sbjct: 13 GRQSPDHARAEAEQLAWPRSLGLIRSDAAAERHLRGGYADLASRFYPHAT-GADLDLGVD 71
Query: 215 C-SPIKAVRDL----GSERRETVRSISGAGARALRGPFPSTRGP---GRTHLWCTSCRAR 60 S DL E E + ++ A AL GP P T P G +W +C Sbjct: 72 LMSWFFLFDDLFDGPRGENPEDTKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCEGM 131
Query: 59 GKRWVAK 39 W A+ Sbjct: 132 TPAWCAR 138
>sp|Q9PQ33|SYFB_UREPA Phenylalanyl-tRNA synthetase beta chain OS=Ureaplasma parvum GN=pheT PE=3 SV=1 Length = 772
Score = 30.0 bits (66), Expect = 4.4 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -1
Query: 200 AVRDLGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGADN 24 A+ DLG E ET+ SI + TR P HL +A K + CGA+N Sbjct: 26 ALMDLGCEV-ETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEIVCGANN 83
>sp|A8LPD4|MUTS_DINSH DNA mismatch repair protein mutS OS=Dinoroseobacter shibae (strain DFL 12) GN=mutS PE=3 SV=1 Length = 877
Score = 29.6 bits (65), Expect = 5.7 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 12/57 (21%) Frame = +1
Query: 133 ALAPAPDMDRTVSR----RSEPRSRTALMG--------EQSNPWDVLPPQVAKSRHR 267 AL PDMDR +SR R PR A+ ++ P D LPP A+S+ R Sbjct: 344 ALRQVPDMDRALSRLALDRGGPRDLAAIRNGLAQAATLAEALPDDALPPLWAQSKSR 400
>sp|Q9ZGE6|BCHD_HELMO Magnesium-chelatase 67 kDa subunit OS=Heliobacillus mobilis GN=bchD PE=3 SV=1 Length = 666
Score = 29.3 bits (64), Expect = 7.5 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 6/45 (13%) Frame = -1
Query: 176 RRETVRSISGAGARALRGPFPSTRG------PGRTHLWCTSCRAR 60 RR T +++ G R L P G P H WC CR R Sbjct: 38 RRGTGKTVLARGLRHLLPPIDQLEGCPCHCNPAEPHSWCNRCRER 82
>sp|P18269|8511_TRYCR Sialidase 85-1.1 OS=Trypanosoma cruzi GN=SA85-1.1 PE=2 SV=2 Length = 752
Score = 29.3 bits (64), Expect = 7.5 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Frame = -1
Query: 329 YSRDNRLIFPKSSHRREGLAP-RCRL--FATWGGSTSQGLDCSPIKAV---RDLGSERRE 168 YS+DN + S EG++P +C W GS +DC + V RD+G+ E Sbjct: 275 YSKDNGSTWSLS----EGISPAKCGAPRITEWEGSLLMIVDCENDQRVYVSRDMGTTWTE 330
Query: 167 TVRSISGAGA 138 + ++SG G+ Sbjct: 331 AIGTLSGVGS 340
>sp|P47988|TEA1_YEAST TY1 enhancer activator OS=Saccharomyces cerevisiae GN=TEA1 PE=1 SV=2 Length = 759
Score = 28.9 bits (63), Expect = 9.8 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%) Frame = -1
Query: 182 SERRETVRSISGAGARALRGPFPSTRGPG-RTHLWCTSCRARGKRWVAKCGADNC 21 S E RS S A R+ G T G R L CT+CR R K+ NC Sbjct: 35 SSNEENSRSSSAANVRSGTGANTLTNGGSTRKRLACTNCRNRRKKCDLGFPCGNC 89
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q4EE25 |
Definition |
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Listeria monocytogenes str. 4b H7858 |
Align length |
101 |
Score (bit) |
170.0 |
E-value |
3.0e-41 |
Report |
|