BP921323
Clone id YMU001_000148_D12
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGGAATATCAGCTCACAGAATCCCTACCAGTCTACACTGTGCAAGGCACTTAAGAATCC
CTACCAGTCTACATTGTGCAAGGCACTTATAGTTTTGGTTCTCACGTTGAGGCCATCACT
CTTCGCACGGGCTTACAATTCTGCATGCAAAGCATGCTAGGGCGATGGATTTGATTCTAC
CGCTTCATGCATTACGCTTCCGCTATCACACTCGCAGCTCTGTCAAGGACAGACTAAGAA
TGGATTGTTAATATGATTGTTGGTTGCTATCAACACACAACAACACTAAAAAGAACCTAA
AATTTTGACTAGATTCACCGACAAAGTGTCCTATTCAAGTCATCCTCCTACAATCACGAC
CCATACACGGTAGATGGTCAAGATTTGAATTGTGTTTTATGTTGCCTCTCTTGATGAGAG
CGTCATACAGAAAGATTCTTGTATGCTTATAGGATAAGCTGCAAATCAGGCATAAGATGC
CTAAGAGCACACATTTTGGGCACACACACACT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921323|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_D12.
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A7T327
Definition tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
Align length 58
Score (bit) 35.0
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921323|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_D12.
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectens... 35 2.1
tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respirato... 34 4.8
tr|B7BM42|B7BM42_9CLOT Putative uncharacterized protein OS=Clost... 33 8.1

>tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g143825 PE=4 SV=1
Length = 244

Score = 35.0 bits (79), Expect = 2.1
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +3

Query: 33 LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALRFRY 206
LHC RHL + LHC RHL + H L + + H R L+L H R R+
Sbjct: 95 LHCMRHLVLQYHLHCMRHLVLQYHL---HRMQHLVLQYHLH-RMQHLVLQYHLHRMRH 148



Score = 33.5 bits (75), Expect = 6.2
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3

Query: 33 LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALR---FR 203
LHC RHL + LHC RHL + H H + H + + L LH ++ +
Sbjct: 35 LHCMRHLVLQYHLHCMRHLVLQYHL--HRMQHLVLQYHLHRMQHLVLQYHLHCMQHLVLQ 92

Query: 204 YH 209
YH
Sbjct: 93 YH 94


>tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respiratory
syncytial virus GN=G PE=4 SV=1
Length = 107

Score = 33.9 bits (76), Expect = 4.8
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +3

Query: 15 HRIPTSLHCARHLRIPT--------SLHCARHL*FWFSR*GHHSSHGLTILH--AKHARA 164
H+ PT +HCARH I T ++HCARH + H+S + +L+ KH +
Sbjct: 31 HQYPT-IHCARHNHIKTHRKRHQHLTIHCARH-----NHIKTHNSTAIPLLNHPRKHNQL 84

Query: 165 MDLILPLHALRFRYHTRSSV 224
+ AL ++H ++ V
Sbjct: 85 HTNTHSIRALHIKFHPKTLV 104


>tr|B7BM42|B7BM42_9CLOT Putative uncharacterized protein
OS=Clostridium hylemonae DSM 15053 GN=CLOHYLEM_01577
PE=4 SV=1
Length = 384

Score = 33.1 bits (74), Expect = 8.1
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3

Query: 33 LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALRFRYHT 212
LH A+ + +C + + S GH+ S + IL K + LPLH LR
Sbjct: 217 LHGAQSVGCGHIQYCGSPMKYSVSESGHNKSLAMVILREKGEEPEVVRLPLHPLRDVIRK 276

Query: 213 RSSVKDRLRM 242
R +KD LR+
Sbjct: 277 RGKLKDILRV 286