BP921331
Clone id YMU001_000148_E09
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATGAAATATTGCGAGTGGAAAAGATGTAATACTCTTGTCTTTTCTTTGATTTTTAATTCC
ACAGGTTAATGTTACTGTTAAATTAGGAATTCCAAAGTAACATCGACTTTTCCTGTTAAT
TCAGCCCATAAATATTTGCCATGCCGAAGGATTGATTACAAAGTGGTTCTGAGTATGCTT
ATTGGTCTATGTTTTATCCCTTTGAAGTGTTATTGCGAAGATGTTGATGAACTTGTCAAA
CCGGCAGGAAACCTATCACCTGAGTGGGATGAGAGCAAATCCACTTGCTTTATGCACATG
GCAGGAAAGGGAGCTAAATATCTATTTATACACTTAAAGACTCTAGAGTGTAGGTTAGTG
AAATTGACATTTTCTTTTTAGGGACATTGACCAAAAAGAAAAAGAACAGTATAAGGCTAT
GGCTGTACCAAATTATTCTTGTTCTATTGTATGTAAATGATAGTTAGCAGTTGGCCGACA
ATGTGTTGATTATGGCCGACAATGTGTTGATGATGAGCAT
■■Homology search results ■■ -
sp_hit_id P14548
Definition sp|P14548|CYB_LEITA Cytochrome b OS=Leishmania tarentolae
Align length 24
Score (bit) 32.7
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921331|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_E09.
(520 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P14548|CYB_LEITA Cytochrome b OS=Leishmania tarentolae GN=MT-... 33 1.1
sp|Q33568|CYB_TRYBO Cytochrome b OS=Trypanoplasma borreli GN=MT-... 32 1.4
sp|P00164|CYB_TRYBB Cytochrome b OS=Trypanosoma brucei brucei GN... 31 3.1

>sp|P14548|CYB_LEITA Cytochrome b OS=Leishmania tarentolae GN=MT-CYB
PE=2 SV=2
Length = 371

Score = 32.7 bits (73), Expect = 1.1
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -1

Query: 472 NC*LSFTYNRTRIIWYSHSLILFF 401
NC L F Y R+ ++W+++SLILF+
Sbjct: 310 NCILWFVYCRSSLLWFTYSLILFY 333


>sp|Q33568|CYB_TRYBO Cytochrome b OS=Trypanoplasma borreli GN=MT-CYB
PE=2 SV=2
Length = 372

Score = 32.3 bits (72), Expect = 1.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1

Query: 472 NC*LSFTYNRTRIIWYSHSLILFFFFLV 389
NC L F Y R+ ++W S SL+LF++ V
Sbjct: 311 NCILIFIYCRSSLLWMSLSLVLFYYLCV 338


>sp|P00164|CYB_TRYBB Cytochrome b OS=Trypanosoma brucei brucei
GN=MT-CYB PE=3 SV=1
Length = 363

Score = 31.2 bits (69), Expect = 3.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1

Query: 472 NC*LSFTYNRTRIIWYSHSLILFF 401
NC L F Y R+ ++W ++SLILF+
Sbjct: 302 NCILWFVYCRSSLLWLTYSLILFY 325


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921331|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_E09.
(520 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******