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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921338
Clone id YMU001_000148_F06
Library
Length 184
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCCCCCAGCCTGATTCAAGCTTTGATCAACAATCAAGCCTAACATACTCAAGATCGGAAC
AAACCATCTGTCGCACACTTGAGGACTTTACTCCGACTCCTCCACTGAAGAGGAGAGCAT
CAACTCTACCACCAAGATTGAGATAATAAGCTCCTAGATACTTCCTGATGCGATGTACAT
ACAC
■■Homology search results ■■ -
sp_hit_id A6QBT0
Definition sp|A6QBT0|ACKA_SULNB Acetate kinase OS=Sulfurovum sp. (strain NBC37-1)
Align length 47
Score (bit) 44.3
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921338|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_F06.
         (184 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6QBT0|ACKA_SULNB Acetate kinase OS=Sulfurovum sp. (strain NB...    44   2e-04
sp|Q7MVI0|ACKA_PORGI Acetate kinase OS=Porphyromonas gingivalis ...    43   5e-04
sp|A7ZDP4|ACKA_CAMC1 Acetate kinase OS=Campylobacter concisus (s...    43   5e-04
sp|A7GYC8|ACKA_CAMC5 Acetate kinase OS=Campylobacter curvus (str...    42   0.001
sp|Q8A1G8|ACKA_BACTN Acetate kinase OS=Bacteroides thetaiotaomic...    42   0.001
sp|O83489|ACKA_TREPA Acetate kinase OS=Treponema pallidum GN=ack...    42   0.001
sp|Q1MRP0|ACKA_LAWIP Acetate kinase OS=Lawsonia intracellularis ...    40   0.005
sp|Q9L298|ACKA_STRCO Acetate kinase OS=Streptomyces coelicolor G...    39   0.006
sp|Q5YNP4|ACKA_NOCFA Acetate kinase OS=Nocardia farcinica GN=ack...    39   0.008
sp|Q64Z48|ACKA_BACFR Acetate kinase OS=Bacteroides fragilis GN=a...    39   0.008
sp|Q5LI41|ACKA_BACFN Acetate kinase OS=Bacteroides fragilis (str...    39   0.008
sp|A6TRU6|ACKA_ALKMQ Acetate kinase OS=Alkaliphilus metalliredig...    39   0.008
sp|Q82JD1|ACKA_STRAW Acetate kinase OS=Streptomyces avermitilis ...    39   0.010
sp|A6KXS0|ACKA_BACV8 Acetate kinase OS=Bacteroides vulgatus (str...    39   0.010
sp|Q73P66|ACKA_TREDE Acetate kinase OS=Treponema denticola GN=ac...    38   0.014
sp|A1VAA0|ACKA_DESVV Acetate kinase OS=Desulfovibrio vulgaris su...    38   0.018
sp|Q726S6|ACKA_DESVH Acetate kinase OS=Desulfovibrio vulgaris (s...    38   0.018
sp|Q30WB0|ACKA_DESDG Acetate kinase OS=Desulfovibrio desulfurica...    38   0.018
sp|A5IKE7|ACKA_THEP1 Acetate kinase OS=Thermotoga petrophila (st...    37   0.030
sp|Q9WYB1|ACKA_THEMA Acetate kinase OS=Thermotoga maritima GN=ac...    37   0.030
sp|Q2RJY3|ACKA_MOOTA Acetate kinase OS=Moorella thermoacetica (s...    37   0.039
sp|Q7N2I1|ACKA_PHOLL Acetate kinase OS=Photorhabdus luminescens ...    36   0.051
sp|A6LHA9|ACKA_PARD8 Acetate kinase OS=Parabacteroides distasoni...    36   0.051
sp|A0RP54|ACKA_CAMFF Acetate kinase OS=Campylobacter fetus subsp...    36   0.051
sp|B0RIG4|ACKA_CLAMS Acetate kinase OS=Clavibacter michiganensis...    36   0.067
sp|A5CPD5|ACKA_CLAM3 Acetate kinase OS=Clavibacter michiganensis...    36   0.067
sp|Q17WE3|ACKA_HELAH Acetate kinase OS=Helicobacter acinonychis ...    35   0.088
sp|P0A6A3|ACKA_ECOLI Acetate kinase OS=Escherichia coli (strain ...    35   0.088
sp|P0A6A4|ACKA_ECOL6 Acetate kinase OS=Escherichia coli O6 GN=ac...    35   0.088
sp|P0A6A5|ACKA_ECO57 Acetate kinase OS=Escherichia coli O157:H7 ...    35   0.088

>sp|A6QBT0|ACKA_SULNB Acetate kinase OS=Sulfurovum sp. (strain
           NBC37-1) GN=ackA PE=3 SV=1
          Length = 396

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 23/47 (48%), Positives = 30/47 (63%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY 44
           +YV+RI+KY+GAY   L G VDAL+F          VR+MVC  +EY
Sbjct: 298 MYVYRIKKYIGAYSATL-GHVDALVFTGGIGEHAALVREMVCEGMEY 343


>sp|Q7MVI0|ACKA_PORGI Acetate kinase OS=Porphyromonas gingivalis
           GN=ackA PE=3 SV=1
          Length = 398

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 22/59 (37%), Positives = 35/59 (59%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRLDC*SKLESG 8
           +Y +RI+KY+GAY   +GG VD L+F           R+ VC+D+E++ +   SK+  G
Sbjct: 304 MYDYRIKKYVGAYAAAMGG-VDVLVFTGGVGENQYTTREKVCTDMEFMGIVFDSKVNEG 361


>sp|A7ZDP4|ACKA_CAMC1 Acetate kinase OS=Campylobacter concisus
           (strain 13826) GN=ackA PE=3 SV=1
          Length = 397

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYV 41
           ++ +R++KY+G+YY  LG RVDAL+F           RQ +C DL+++
Sbjct: 299 MFCYRVKKYIGSYYAILG-RVDALIFTGGIGENAPNTRQKICDDLKHL 345


>sp|A7GYC8|ACKA_CAMC5 Acetate kinase OS=Campylobacter curvus (strain
           525.92) GN=ackA PE=3 SV=1
          Length = 398

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYV 41
           ++ +R++KY+GAYY  L G VDAL+F           RQ +C DL+++
Sbjct: 299 MFCYRVKKYIGAYYAVL-GHVDALIFTGGIGENAPNTRQKICDDLKHL 345


>sp|Q8A1G8|ACKA_BACTN Acetate kinase OS=Bacteroides thetaiotaomicron
           GN=ackA PE=3 SV=1
          Length = 399

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           +Y +RI+KY+GAY   LGG VD +LF           R+ VC D+E+  ++LD
Sbjct: 304 MYYYRIKKYIGAYAAALGG-VDIILFTGGVGENQFECRESVCKDMEFMGIKLD 355


>sp|O83489|ACKA_TREPA Acetate kinase OS=Treponema pallidum GN=ackA
           PE=3 SV=1
          Length = 448

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -1

Query: 178 VHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           VHRIRKY GAY   LG + DAL+F          VR   C+ LE+  +RLD
Sbjct: 306 VHRIRKYFGAYVAALGKQPDALVFTAGVGEMCCDVRAAACAGLEHLGIRLD 356


>sp|Q1MRP0|ACKA_LAWIP Acetate kinase OS=Lawsonia intracellularis
           (strain PHE/MN1-00) GN=ackA PE=3 SV=1
          Length = 404

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLE 47
           ++++RI+KYLGAYY  L G +D ++F          VR+ VCS LE
Sbjct: 307 MFIYRIKKYLGAYYAIL-GHLDGIIFTAGIGENDTIVREKVCSGLE 351


>sp|Q9L298|ACKA_STRCO Acetate kinase OS=Streptomyces coelicolor
           GN=ackA PE=3 SV=1
          Length = 407

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLE 47
           +Y+HR++KY+GAYY  L GRVDA+ F          VR+   + LE
Sbjct: 305 IYIHRLKKYIGAYYAVL-GRVDAVAFTAGVGENSAPVREAAVAGLE 349


>sp|Q5YNP4|ACKA_NOCFA Acetate kinase OS=Nocardia farcinica GN=ackA
           PE=3 SV=1
          Length = 402

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLF 107
           VYVHR+R+YLGAY + LGG VDA+ F
Sbjct: 306 VYVHRLRRYLGAYLIALGG-VDAITF 330


>sp|Q64Z48|ACKA_BACFR Acetate kinase OS=Bacteroides fragilis GN=ackA
           PE=3 SV=1
          Length = 398

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           +Y +RI+KY+GAY   LGG VD +LF           R  VC  LE+  V+LD
Sbjct: 304 MYFYRIKKYIGAYAAALGG-VDVILFTGGVGENQATCRAGVCEGLEFLGVKLD 355
tr_hit_id A9TTS6
Definition tr|A9TTS6|A9TTS6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 46
Score (bit) 48.5
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921338|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_F06.
         (184 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TTS6|A9TTS6_PHYPA Predicted protein OS=Physcomitrella paten...    49   2e-04
tr|B2RK02|B2RK02_PORG3 Acetate kinase OS=Porphyromonas gingivali...    43   0.009
tr|B8E191|B8E191_9BACT Acetate kinase OS=Dictyoglomus turgidum D...    43   0.009
tr|B5GKZ7|B5GKZ7_STRCL Acetate kinase OS=Streptomyces clavuliger...    42   0.015
tr|B2S371|B2S371_TREPS Acetate kinase OS=Treponema pallidum subs...    42   0.020
tr|A7M073|A7M073_BACOV Putative uncharacterized protein OS=Bacte...    42   0.020
tr|A5ZK13|A5ZK13_9BACE Putative uncharacterized protein OS=Bacte...    42   0.020
tr|B5YDP7|B5YDP7_DICT6 Acetate kinase OS=Dictyoglomus thermophil...    41   0.035
tr|B5Y7W0|B5Y7W0_COPPD Acetate kinase OS=Coprothermobacter prote...    40   0.045
tr|B5H9G0|B5H9G0_STRPR Acetate kinase OS=Streptomyces pristinaes...    40   0.059
tr|B6WP95|B6WP95_9BACE Putative uncharacterized protein OS=Bacte...    40   0.077
tr|A6C951|A6C951_9PLAN Acetate kinase OS=Planctomyces maris DSM ...    40   0.077
tr|A9RRI2|A9RRI2_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.077
tr|Q03Q44|Q03Q44_LACBA Acetate kinase OS=Lactobacillus brevis (s...    39   0.10 
tr|B0VF39|B0VF39_9BACT Acetate kinase A (Propionate kinase 2) OS...    39   0.10 
tr|B6WVP5|B6WVP5_9DELT Putative uncharacterized protein OS=Desul...    39   0.13 
tr|B0TGV2|B0TGV2_HELMI Acetate kinase OS=Heliobacterium modestic...    39   0.17 
tr|B6VVD7|B6VVD7_9BACE Putative uncharacterized protein OS=Bacte...    39   0.17 
tr|B5GGW9|B5GGW9_9ACTO Acetate kinase OS=Streptomyces sp. SPB74 ...    39   0.17 
tr|A8J000|A8J000_CHLRE Acetate kinase OS=Chlamydomonas reinhardt...    39   0.17 
tr|B4B353|B4B353_9CHRO Acetate kinase OS=Cyanothece sp. PCC 7822...    35   0.20 
tr|Q0SEN3|Q0SEN3_RHOSR Acetate kinase OS=Rhodococcus sp. (strain...    38   0.22 
tr|B6YQE9|B6YQE9_AZOPC Acetate kinase OS=Azobacteroides pseudotr...    38   0.22 
tr|B8DUT8|B8DUT8_BIFAN Acetate kinase OS=Bifidobacterium animali...    38   0.22 
tr|B5HMJ7|B5HMJ7_9ACTO Acetate kinase OS=Streptomyces sviceus AT...    38   0.22 
tr|B2E8K7|B2E8K7_BIFAN Acetate kinase OS=Bifidobacterium animali...    38   0.22 
tr|A7CZA5|A7CZA5_9BACT Acetate kinase OS=Opitutaceae bacterium T...    38   0.22 
tr|Q3J7M7|Q3J7M7_NITOC Acetate kinase OS=Nitrosococcus oceani (s...    38   0.29 
tr|B6C4V9|B6C4V9_9GAMM Acetate kinase OS=Nitrosococcus oceani AF...    38   0.29 
tr|B3C6Z9|B3C6Z9_9BACE Putative uncharacterized protein OS=Bacte...    38   0.29 

>tr|A9TTS6|A9TTS6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_110540 PE=4 SV=1
          Length = 407

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLE 47
           VYVHRIR YLG+Y+  L G+VDAL+F           R ++C  LE
Sbjct: 303 VYVHRIRSYLGSYFFQLEGQVDALVFSAGVGEASGRTRALICEGLE 348


>tr|B2RK02|B2RK02_PORG3 Acetate kinase OS=Porphyromonas gingivalis
           (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=PGN_1178
           PE=4 SV=1
          Length = 398

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 22/59 (37%), Positives = 35/59 (59%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRLDC*SKLESG 8
           +Y +RI+KY+GAY   +GG VD L+F           R+ VC+D+E++ +   SK+  G
Sbjct: 304 MYDYRIKKYVGAYAAAMGG-VDVLVFTGGVGENQYTTREKVCTDMEFMGIVFDSKVNEG 361


>tr|B8E191|B8E191_9BACT Acetate kinase OS=Dictyoglomus turgidum DSM
           6724 GN=Dtur_0938 PE=4 SV=1
          Length = 405

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           V+ +R++KY+GAYY  LGG +D L+F           R ++CS LE+  ++LD
Sbjct: 304 VFAYRVKKYIGAYYAILGG-LDVLVFTAGVGERGPLERSLICSGLEHLGIKLD 355


>tr|B5GKZ7|B5GKZ7_STRCL Acetate kinase OS=Streptomyces clavuligerus
           ATCC 27064 GN=SSCG_00021 PE=4 SV=1
          Length = 409

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRLDC*SKL 17
           +Y+HR++KY+GAYY  L GRVDA+ F          VRQ   + LE + L   S+L
Sbjct: 310 IYIHRLKKYIGAYYAVL-GRVDAIAFTAGVGENAAPVRQAAVAGLEELGLALDSEL 364


>tr|B2S371|B2S371_TREPS Acetate kinase OS=Treponema pallidum subsp.
           pallidum (strain SS14) GN=ack PE=4 SV=1
          Length = 448

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = -1

Query: 178 VHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           VHRIRKY GAY   LG + DAL+F          VR   C+ LE+  +RLD
Sbjct: 306 VHRIRKYFGAYVAALGKQPDALVFTAGVGEMCCDVRAAACAGLEHLGIRLD 356


>tr|A7M073|A7M073_BACOV Putative uncharacterized protein
           OS=Bacteroides ovatus ATCC 8483 GN=BACOVA_03500 PE=3
           SV=1
          Length = 399

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRLD 32
           +Y +RI+KY+GAY   LGG VD +LF           R+ VC D+E++ ++
Sbjct: 304 MYYYRIKKYIGAYAAALGG-VDIILFTGGVGENQMECRREVCKDMEFMGIE 353


>tr|A5ZK13|A5ZK13_9BACE Putative uncharacterized protein
           OS=Bacteroides caccae ATCC 43185 GN=BACCAC_03250 PE=3
           SV=1
          Length = 399

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRLD 32
           +Y +RI+KY+GAY   LGG VD +LF           R+ VC D+E++ ++
Sbjct: 304 MYYYRIKKYIGAYAAALGG-VDIILFTGGVGENQMECRREVCKDMEFMGIE 353


>tr|B5YDP7|B5YDP7_DICT6 Acetate kinase OS=Dictyoglomus thermophilum
           (strain ATCC 35947 / DSM 3960 / H-6-12) GN=ackA PE=4
           SV=1
          Length = 399

 Score = 40.8 bits (94), Expect = 0.035
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           V+ +R++KY+GAY+  LGG +D L+F           R ++CS LE+  ++LD
Sbjct: 304 VFAYRVKKYIGAYHAILGG-LDVLVFTAGVGERGPLERSLICSGLEHLGIKLD 355


>tr|B5Y7W0|B5Y7W0_COPPD Acetate kinase OS=Coprothermobacter
           proteolyticus (strain ATCC 35245 / DSM 5265 / BT)
           GN=ackA PE=4 SV=1
          Length = 400

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEY--VRLD 32
           VY +R++KY+G Y   +GG VD L+F          VR+MVC  LE+  ++LD
Sbjct: 305 VYCYRLKKYIGGYAAVMGG-VDVLIFTAGVGENSPIVREMVCEGLEFLGIKLD 356


>tr|B5H9G0|B5H9G0_STRPR Acetate kinase OS=Streptomyces
           pristinaespiralis ATCC 25486 GN=SSDG_01790 PE=4 SV=1
          Length = 416

 Score = 40.0 bits (92), Expect = 0.059
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -1

Query: 184 VYVHRIRKYLGAYYLNLGGRVDALLFXXXXXXXXXXVRQMVCSDLEYVRL 35
           +YVHR++KY+GAYY  L GRVDA+ F          VR+   + LE + L
Sbjct: 310 IYVHRLKKYIGAYYAVL-GRVDAVAFTAGVGENAAAVREAALAGLEEMGL 358