BP921345
Clone id YMU001_000148_G02
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGAACTGATTGCTTCATTTTCCTCATCTGAGTATATACAATACTGACCATAATAATATA
GTTTTCATGAATACAAACAGGAGTAAAAACTCTCCTTGAACCAGCACCAGAGCTCATCAA
CAGCTTACCTTCCAAAAATGGAGCACAATAACGTGTTTGGCAAAGTGTAGAGATTGTGAA
TAATCGCTCTCCTCTCCAGATGCTTGCTGCTGTCACTTTTGCCAAGCAGCTCGTATCCTA
CGCTAACTTCGGTCATATAAGATATCCTCTCAAGCACATCATAACTTCTGAGCTTTACCC
AGACACATGTTCCAAAGAGGAGGTTCTGCCGGCATCATTAACTTCATATCCCTGCTCTAA
AGCCTTGTAAGCCGCTATCAGCTGATTGAATCTTTCTTACAAACAATGAGAGCAGAGGAA
AACCAGAAACAAATCTCTCTTT
■■Homology search results ■■ -
sp_hit_id Q1GB34
Definition sp|Q1GB34|Y621_LACDA UPF0042 protein Ldb0621 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081)
Align length 49
Score (bit) 30.0
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921345|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_G02.
(442 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1GB34|Y621_LACDA UPF0042 protein Ldb0621 OS=Lactobacillus de... 30 4.5
sp|Q04BI0|Y556_LACDB UPF0042 protein LBUL_0556 OS=Lactobacillus ... 30 4.5
sp|Q91365|QN1_COTCO Protein quail neuroretina 1 (Fragment) OS=Co... 30 4.5

>sp|Q1GB34|Y621_LACDA UPF0042 protein Ldb0621 OS=Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM
20081) GN=Ldb0621 PE=3 SV=2
Length = 292

Score = 30.0 bits (66), Expect = 4.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2

Query: 159 QTRYCAPFLEGKLLMSSGAGSRRVFTPVCIHENYIIMVSIVYTQMRKMK 13
+TR P E L+ RR+ TPV NYI+ S + T+ K K
Sbjct: 107 ETRRLPPLAENGRLLDGIRDERRILTPVRNRSNYILDTSKMTTKELKQK 155


>sp|Q04BI0|Y556_LACDB UPF0042 protein LBUL_0556 OS=Lactobacillus
delbrueckii subsp. bulgaricus (strain ATCC BAA-365)
GN=LBUL_0556 PE=3 SV=1
Length = 292

Score = 30.0 bits (66), Expect = 4.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2

Query: 159 QTRYCAPFLEGKLLMSSGAGSRRVFTPVCIHENYIIMVSIVYTQMRKMK 13
+TR P E L+ RR+ TPV NYI+ S + T+ K K
Sbjct: 107 ETRRLPPLAENGRLLDGIRDERRILTPVRNRSNYILDTSKMTTKELKQK 155


>sp|Q91365|QN1_COTCO Protein quail neuroretina 1 (Fragment)
OS=Coturnix coturnix GN=QN1 PE=1 SV=1
Length = 1251

Score = 30.0 bits (66), Expect = 4.5
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Frame = +2

Query: 83 VKTLLEPAPELINSLPSKNGAQ*RVWQS--VEIVNNRSPLQMLAAVTFAKQLVSYANFGH 256
VK + E +N LP K VW++ +E N + + A
Sbjct: 325 VKVIGSTVNEHVNHLPYKEHKNESVWETNLLEKFNREDSIFLQTAAN---------EDSF 375

Query: 257 IRYPLKHIITSELYPDTCSKE 319
+R P K I TSE+ PD SKE
Sbjct: 376 LRMPGKEIQTSEVQPDVLSKE 396


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921345|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_G02.
(442 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******