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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921348
Clone id YMU001_000148_G05
Library
Length 519
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GATACTGTTCTGACCACCCCCCATGGCTTGTGGGCTACTACCTCCTCCACCTTGACCGCC
CTCCACTATATCCGGGCCTTTAGTTTACCATCGAATGAGGAATCCTTTGCCTCATCTTGG
CCTCCCATCACTACATCCGCATATGAGCCCGTATGTGCTTGATCCATGTGCTTCTACAGC
TGTGAGCAATATTAAGAGAAAACCCTATGAACCTCTGACAGTGGATCGCGAAATCTCTGC
TGACTATGGGTCACGATGCATGTCAAGTGAAGGGGACTCATACCCTCGATGCCTACCAAG
GAGCCAAGGGTGTACTCAGGGCTTGAATCTTGACACGAGACGGCATCTTGTAAATCCCAA
AGGCACCTAAGGCATACAGTGTGGAGGCTTGCAAGCAGCGCAAGCACCTCAACCTCAAAA
GGAGAGGATTCCAAAAGTGAGAGCTGTTCTGTCCTTGATCCCTACAGATACTCAACCTTT
ATGTGATGCGAGATGGCAGCTTTCCTTACTCCAGTCCAC
■■Homology search results ■■ -
sp_hit_id Q8IXW0
Definition sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo sapiens
Align length 56
Score (bit) 35.4
E-value 0.16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921348|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_G05.
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo s...    35   0.16 
sp|Q2RN76|MNMG_RHORT tRNA uridine 5-carboxymethylaminomethyl mod...    31   3.0  
sp|Q0CZL3|DUS3_ASPTN tRNA-dihydrouridine synthase 3 OS=Aspergill...    30   5.2  

>sp|Q8IXW0|CK035_HUMAN Uncharacterized protein C11orf35 OS=Homo
           sapiens GN=C11orf35 PE=2 SV=1
          Length = 634

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query: 283 PSMPTKEPRVYSGLES*HETASCK-SQRHLRHTVWRLASSASTSTSKGEDSKSESC 447
           PS   K+PR +  L++    +S K S+RH +   W      +TS+S G DS S SC
Sbjct: 233 PSSKQKQPRPWPQLDTGSPESSGKHSERHHKTVEWGSLPCLNTSSSGGADSDSSSC 288


>sp|Q2RN76|MNMG_RHORT tRNA uridine 5-carboxymethylaminomethyl
           modification enzyme mnmG OS=Rhodospirillum rubrum
           (strain ATCC 11170 / NCIB 8255) GN=mnmG PE=3 SV=1
          Length = 629

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 311 TLGSLVGIEGMSPLHLTCIVTHSQQRFRDPLSE 213
           TLG+   I GM+P  LT ++ H ++R RD + E
Sbjct: 594 TLGAAARIPGMTPAALTALLRHVKRRERDSVEE 626


>sp|Q0CZL3|DUS3_ASPTN tRNA-dihydrouridine synthase 3 OS=Aspergillus
           terreus (strain NIH 2624) GN=dus3 PE=3 SV=1
          Length = 719

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -2

Query: 152 TGSYADVVMGGQDEAKDSSFDGKLKARI*WRAVKVEEVVA 33
           T S +D ++ G D +KD  F  ++ A   W+A+K  EV++
Sbjct: 369 TISPSDKIVQGYDNSKDMKFGAQIAANKPWQALKATEVLS 408
tr_hit_id Q58CV7
Definition tr|Q58CV7|Q58CV7_BOVIN Putative uncharacterized protein DKFZp761E198 OS=Bos taurus
Align length 39
Score (bit) 33.5
E-value 6.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921348|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_G05.
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q58CV7|Q58CV7_BOVIN Putative uncharacterized protein DKFZp761...    33   6.5  
tr|Q0V8N1|Q0V8N1_BOVIN Putative uncharacterized protein DKFZp761...    33   6.5  
tr|Q57U15|Q57U15_9TRYP Putative uncharacterized protein OS=Trypa...    33   6.5  
tr|Q57U13|Q57U13_9TRYP Putative uncharacterized protein OS=Trypa...    33   6.5  
tr|Q57U11|Q57U11_9TRYP Putative uncharacterized protein OS=Trypa...    33   6.5  
tr|Q57U09|Q57U09_9TRYP Putative uncharacterized protein OS=Trypa...    33   6.5  

>tr|Q58CV7|Q58CV7_BOVIN Putative uncharacterized protein
           DKFZp761E198 OS=Bos taurus GN=DKFZp761E198 PE=2 SV=1
          Length = 553

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 410 EVLALLASLHTVCLRCLWDLQDAVSCQDSSPEYTLGSLV 294
           E +ALLA LH +CL C+ D +     QD SP + L  L+
Sbjct: 82  EPMALLARLHLLCLLCVEDEEKEGKGQDRSPRHYLEELL 120


>tr|Q0V8N1|Q0V8N1_BOVIN Putative uncharacterized protein
           DKFZp761E198 (Fragment) OS=Bos taurus GN=DKFZp761E198
           PE=2 SV=1
          Length = 543

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -2

Query: 410 EVLALLASLHTVCLRCLWDLQDAVSCQDSSPEYTLGSLV 294
           E +ALLA LH +CL C+ D +     QD SP + L  L+
Sbjct: 72  EPMALLARLHLLCLLCVEDEEKEGKGQDRSPRHYLEELL 110


>tr|Q57U15|Q57U15_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb927.7.390 PE=4 SV=1
          Length = 421

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 437 VRAVLSLIPTDTQPLCDARWQLSLLQS 517
           V+AVL   P  T P+C +RW+++L+QS
Sbjct: 129 VKAVLQFFPDKTLPICVSRWKVALVQS 155


>tr|Q57U13|Q57U13_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb927.7.410 PE=4 SV=1
          Length = 172

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 437 VRAVLSLIPTDTQPLCDARWQLSLLQS 517
           V+AVL   P  T P+C +RW+++L+QS
Sbjct: 129 VKAVLQFFPDKTLPICVSRWKVALVQS 155


>tr|Q57U11|Q57U11_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb927.7.430 PE=4 SV=1
          Length = 172

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 437 VRAVLSLIPTDTQPLCDARWQLSLLQS 517
           V+AVL   P  T P+C +RW+++L+QS
Sbjct: 129 VKAVLQFFPDKTLPICVSRWKVALVQS 155


>tr|Q57U09|Q57U09_9TRYP Putative uncharacterized protein
           OS=Trypanosoma brucei GN=Tb927.7.450 PE=4 SV=1
          Length = 770

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 437 VRAVLSLIPTDTQPLCDARWQLSLLQS 517
           V+AVL   P  T P+C +RW+++L+QS
Sbjct: 478 VKAVLQFFPDKTLPICVSRWKVALVQS 504