BP921356 [AcEST]

BP921356
Clone id	YMU001_000148_H05
Library	YMU01
Length	458
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000148_H05.
Accession	BP921356
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	TTCAAAAAGAGAACTTCAAGAGAAAAGCTGTTGATTATCATTTGTTCTTACAGTGAAGTG TACATATATTGGCCACAATGCACAGGAGCCGAAAAAAAGTGGCCCTTTTATTTACACGAA CCAAAAATCATTAGTTACAGGGTGAGAAGCCCAAACTGTATGTAGGACTTTCAAAATGGG CAATGCCTACCTGCTAGCAAAAAATGAAAAGCTGGAGCTATTTTGCTTCTGCAACCAGCC TACCAATCGATAAGTACAAAGCATGGTTGATACAACCAATCAGAACCTATATTTCTCTTT CCTACACTCTCCTAGGTATTAACTCTACAATTTCCTCTCTTATACATTCATCCTCCACAA AAAGAAACCCTATAAGAAAATATCAATACAGTCTCACAACCGCATCTCTCTCTGCCCTGC CTGCATTCCTCCAATCCCGGTCGGACGGTCCTAGAAGC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P0A1B9
Definition	sp\|P0A1B9\|SPAL_SALTY Probable ATP synthase spaL OS=Salmonella typhimurium
Align length	25
Score (bit)	30.4
E-value	3.8
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921356\|Adiantum capillus-veneris mRNA, clone: YMU001_000148_H05. (458 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P0A1B9\|SPAL_SALTY Probable ATP synthase spaL OS=Salmonella ty... 30 3.8 sp\|P0A1C0\|SPAL_SALTI Probable ATP synthase spaL OS=Salmonella ty... 30 3.8 sp\|Q9S7H5\|SCL21_ARATH Scarecrow-like protein 21 OS=Arabidopsis t... 30 6.6 >sp\|P0A1B9\|SPAL_SALTY Probable ATP synthase spaL OS=Salmonella typhimurium GN=spaL PE=1 SV=1 Length = 431 Score = 30.4 bits (67), Expect = 3.8 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 249 DKYKAWLIQPIRTYISLSYTLLGIN 323 D KAWL QP+ Y S TL G+N Sbjct: 401 DSLKAWLCQPVAQYSSFDDTLSGMN 425 >sp\|P0A1C0\|SPAL_SALTI Probable ATP synthase spaL OS=Salmonella typhi GN=spaL PE=3 SV=1 Length = 431 Score = 30.4 bits (67), Expect = 3.8 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +3 Query: 249 DKYKAWLIQPIRTYISLSYTLLGIN 323 D KAWL QP+ Y S TL G+N Sbjct: 401 DSLKAWLCQPVAQYSSFDDTLSGMN 425 >sp\|Q9S7H5\|SCL21_ARATH Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1 Length = 413 Score = 29.6 bits (65), Expect = 6.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 326 YNFLSYTFILHKKKPYKKISIQSHN 400 Y FLSY ++LH+ PY K S N Sbjct: 121 YEFLSYVYVLHEVCPYFKFGYMSAN 145
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	Q067A7
Definition	tr\|Q067A7\|Q067A7_9SYNE Photolyase protein family OS=Synechococcus sp. BL107
Align length	36
Score (bit)	32.7
E-value	9.2
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921356\|Adiantum capillus-veneris mRNA, clone: YMU001_000148_H05. (458 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|Q067A7\|Q067A7_9SYNE Photolyase protein family OS=Synechococcu... 33 9.2 >tr\|Q067A7\|Q067A7_9SYNE Photolyase protein family OS=Synechococcus sp. BL107 GN=BL107_12970 PE=4 SV=1 Length = 495 Score = 32.7 bits (73), Expect = 9.2 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 162 HTVWASHP-VTNDFWFV*IKGPLFFGSCALWPIYVH 58 H ++A HP + I+ PLFFG+ LWPI VH Sbjct: 9 HQLFAEHPAIQRGRGVALIEDPLFFGTDPLWPIKVH 44