BP921358 |
Clone id |
YMU001_000148_H07 |
Library |
YMU01 |
Length |
487 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000148_H07. |
Accession |
BP921358 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTGTTTTTTCAAGAAATTTGACTTGAGACTGACAAGGATCTTAGTAAAAGAAAAAGTATG ATTTGCTTGGCTAATTTCTTGCCAGTTCTTACTCTAGTTTATCATTAGGCAGCTACTTCT ATCTGCAACAGACAATCCTCATGTAGAAGACCTTCACGTTTAGCTCCCCTAAACTCAATG GAATTATCTGTTACTTCCAATCGATGCTGCTCCTGTAGAACGCCTTCATTGGTAGCTTCC CTATATTCAGAAGCATTGTCAGTCCCTTCCAGATGACGATCCTTGCTAGTCTGCACGCTT CTCAAGAAATCTCTTAGAACTCCAATGGCTTCCTTATCTAGCCTGGGAATAGTATGCTTA GCTCCATGTCGAACAATGATAGGTACTTCAAACACCTGACGAAGCTCCTCGTTCTTTGGT TTTAGCCAATCTTTTGAACCTATAAAATGCACAGAAGGGCACCTTATGATGTCCGAATAG CAATCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2RUR9 |
Definition |
sp|A2RUR9|C144A_HUMAN Coiled-coil domain-containing protein 144A OS=Homo sapiens |
Align length |
116 |
Score (bit) |
35.0 |
E-value |
0.16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PEK0 |
Definition |
tr|A9PEK0|A9PEK0_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
111 |
Score (bit) |
76.6 |
E-value |
6.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921358|Adiantum capillus-veneris mRNA, clone: YMU001_000148_H07. (469 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9PEK0|A9PEK0_POPTR Putative uncharacterized protein OS=Popul... 77 6e-13 tr|B8B658|B8B658_ORYSI Putative uncharacterized protein OS=Oryza... 72 1e-11 tr|Q8LIG3|Q8LIG3_ORYSJ Os07g0687100 protein OS=Oryza sativa subs... 71 3e-11 tr|A7PTF9|A7PTF9_VITVI Chromosome chr8 scaffold_29, whole genome... 68 2e-10 tr|A7PEU2|A7PEU2_VITVI Chromosome chr11 scaffold_13, whole genom... 68 3e-10 tr|B6TQZ3|B6TQZ3_MAIZE Putative uncharacterized protein OS=Zea m... 66 1e-09 tr|Q7XV53|Q7XV53_ORYSJ Os04g0450100 protein OS=Oryza sativa subs... 64 3e-09 tr|Q01JG7|Q01JG7_ORYSA H0818E04.16 protein OS=Oryza sativa GN=H0... 64 3e-09 tr|A2XU19|A2XU19_ORYSI Putative uncharacterized protein OS=Oryza... 64 3e-09 tr|B6UG11|B6UG11_MAIZE Putative uncharacterized protein OS=Zea m... 62 1e-08 tr|Q9FKP9|Q9FKP9_ARATH Similarity to unknown protein OS=Arabidop... 61 3e-08 tr|Q0V802|Q0V802_ARATH At5g65400 OS=Arabidopsis thaliana PE=2 SV=1 61 3e-08 tr|A7NUR0|A7NUR0_VITVI Chromosome chr18 scaffold_1, whole genome... 60 5e-08 tr|Q9STV6|Q9STV6_ARATH Putative uncharacterized protein AT4g2438... 53 7e-06 tr|Q8LC87|Q8LC87_ARATH Putative uncharacterized protein OS=Arabi... 53 7e-06 tr|Q8GX45|Q8GX45_ARATH Putative uncharacterized protein At4g2438... 53 7e-06 tr|A9PDU2|A9PDU2_POPTR Putative uncharacterized protein OS=Popul... 52 1e-05 tr|A5AZ07|A5AZ07_VITVI Putative uncharacterized protein OS=Vitis... 50 7e-05 tr|A8I8I9|A8I8I9_CHLRE Predicted protein OS=Chlamydomonas reinha... 48 3e-04 tr|A9RWN1|A9RWN1_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.020 tr|A8J9Y5|A8J9Y5_CHLRE Predicted protein OS=Chlamydomonas reinha... 40 0.045 tr|A7SDP4|A7SDP4_NEMVE Predicted protein OS=Nematostella vectens... 40 0.045 tr|B4KGC9|B4KGC9_DROMO GI16977 OS=Drosophila mojavensis GN=GI169... 40 0.058 tr|A0D1W9|A0D1W9_PARTE Chromosome undetermined scaffold_34, whol... 39 0.17 tr|B4LTV2|B4LTV2_DROVI GJ17223 OS=Drosophila virilis GN=GJ17223 ... 38 0.22 tr|A0D1X0|A0D1X0_PARTE Chromosome undetermined scaffold_34, whol... 37 0.50 tr|A9TKW1|A9TKW1_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.85 tr|B3MP83|B3MP83_DROAN GF14161 OS=Drosophila ananassae GN=GF1416... 35 1.4 tr|Q3KC37|Q3KC37_PSEPF Cointegrate resolution protein T OS=Pseud... 35 1.9 tr|A0DEB8|A0DEB8_PARTE Chromosome undetermined scaffold_48, whol... 35 1.9
>tr|A9PEK0|A9PEK0_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 262
Score = 76.6 bits (187), Expect = 6e-13 Identities = 40/111 (36%), Positives = 63/111 (56%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y D I+ SVHFIG+KDWLK +E+L F+ P+I+RH HT+PRLD+ A LR + Sbjct: 142 YKDTIKVKSVHFIGAKDWLKEPSEDLATAFDSPLIIRHPQGHTVPRLDEAATEQLRAWAT 201
Query: 281 SVQTSKDRHLEGTDNASEYREATNEGVLQEQHRLEVTDNSIEFRGAKREGL 129 + + ++ L G ++ E E V E+ + E N I+ +++G+ Sbjct: 202 EILSYNNKILNGENHELENGETK---VDDEEKKPEEVSNKIDTTQVQQDGI 249
>tr|B8B658|B8B658_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27396 PE=4 SV=1 Length = 247
Score = 72.0 bits (175), Expect = 1e-11 Identities = 37/84 (44%), Positives = 50/84 (59%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y D I+ SVHFIG KDWLK +EEL FE P+I RH HT+PRLD+ ++ L ++ Sbjct: 148 YKDPIKVKSVHFIGEKDWLKVPSEELAAAFEDPVITRHPQGHTVPRLDEASVKQLSEWSS 207
Query: 281 SVQTSKDRHLEGTDNASEYREATN 210 S+ LE NA + +A+N Sbjct: 208 SI-------LEDIKNADDVAKASN 224
>tr|Q8LIG3|Q8LIG3_ORYSJ Os07g0687100 protein OS=Oryza sativa subsp. japonica GN=OJ1200_C08.123 PE=2 SV=1 Length = 247
Score = 70.9 bits (172), Expect = 3e-11 Identities = 36/83 (43%), Positives = 50/83 (60%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y D I+ SVHFIG KDWLK +EEL FE P+I+RH HT+PRLD+ ++ L ++ Sbjct: 148 YKDPIKVKSVHFIGEKDWLKVPSEELAAAFEDPVIIRHPQGHTVPRLDEASVKQLSEWSS 207
Query: 281 SVQTSKDRHLEGTDNASEYREAT 213 S+ LE NA + +A+ Sbjct: 208 SI-------LEDIKNADDVAKAS 223
>tr|A7PTF9|A7PTF9_VITVI Chromosome chr8 scaffold_29, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023340001 PE=4 SV=1 Length = 261
Score = 68.2 bits (165), Expect = 2e-10 Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 1/99 (1%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y D I+ SVHFIG+KDWL+ +E+L F+ P+I+RH HT+PRLD+ A LR + Sbjct: 142 YKDPIKVRSVHFIGAKDWLRLPSEDLATAFDNPLIIRHPQGHTVPRLDEAATEQLRSWTT 201
Query: 281 SVQTSKDRHLEGTDNASEYREATNEG-VLQEQHRLEVTD 168 + L ++NAS + G V E+H+ +V + Sbjct: 202 EIL------LHQSNNASVNKHNLENGEVKAEEHKGKVEE 234
>tr|A7PEU2|A7PEU2_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016789001 PE=4 SV=1 Length = 153
Score = 67.8 bits (164), Expect = 3e-10 Identities = 40/103 (38%), Positives = 59/103 (57%), Gaps = 7/103 (6%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRD--- 291 Y D I+ SVHFIG+KDWL+ +E+L F+ P+I+RH HTIPRLD+ A LR Sbjct: 22 YKDPIKVRSVHFIGAKDWLRLPSEDLATAFDNPLIIRHPQGHTIPRLDEAATEQLRSCST 81
Query: 290 ---FLRSVQTSKDRH-LEGTDNASEYREATNEGVLQEQHRLEV 174 +S S ++H LE + ++ + N V E+H+ +V Sbjct: 82 EILLHQSNNPSVNKHNLENGEVKADEAQMENGEVKAEEHKGKV 124
>tr|B6TQZ3|B6TQZ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 244
Score = 65.9 bits (159), Expect = 1e-09 Identities = 29/58 (50%), Positives = 39/58 (67%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDF 288 Y D I+ SVHFIG KDWLK +EEL F+ P+I+RH HT+PRLD ++ L ++ Sbjct: 148 YKDPIKVKSVHFIGEKDWLKVPSEELASAFDEPLIIRHPQGHTVPRLDDVSVKQLSEW 205
>tr|Q7XV53|Q7XV53_ORYSJ Os04g0450100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0086B14.2 PE=4 SV=1 Length = 245
Score = 64.3 bits (155), Expect = 3e-09 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y++ I+CPSVHF+G D+LK E+L + + P I+RH HT+PRLD++++ ++ FL Sbjct: 164 YANNIKCPSVHFLGDTDFLKTHGEKLIESYVDPFIIRHPKGHTVPRLDEKSLEIMLRFLD 223
Query: 281 SVQTSKDRHLEGTD 240 ++ TD Sbjct: 224 KIEKETALEHSSTD 237
>tr|Q01JG7|Q01JG7_ORYSA H0818E04.16 protein OS=Oryza sativa GN=H0818E04.16 PE=4 SV=1 Length = 245
Score = 64.3 bits (155), Expect = 3e-09 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y++ I+CPSVHF+G D+LK E+L + + P I+RH HT+PRLD++++ ++ FL Sbjct: 164 YANNIKCPSVHFLGDTDFLKTHGEKLIESYVDPFIIRHPKGHTVPRLDEKSLEIMLRFLD 223
Query: 281 SVQTSKDRHLEGTD 240 ++ TD Sbjct: 224 KIEKETALEHSSTD 237
>tr|A2XU19|A2XU19_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16097 PE=4 SV=1 Length = 245
Score = 64.3 bits (155), Expect = 3e-09 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y++ I+CPSVHF+G D+LK E+L + + P I+RH HT+PRLD++++ ++ FL Sbjct: 164 YANNIKCPSVHFLGDTDFLKTHGEKLIESYVDPFIIRHPKGHTVPRLDEKSLEIMLRFLD 223
Query: 281 SVQTSKDRHLEGTD 240 ++ TD Sbjct: 224 KIEKETALEHSSTD 237
>tr|B6UG11|B6UG11_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 239
Score = 62.0 bits (149), Expect = 1e-08 Identities = 27/63 (42%), Positives = 41/63 (65%) Frame = -3
Query: 461 YSDIIRCPSVHFIGSKDWLKPKNEELRQVFEVPIIVRHGAKHTIPRLDKEAIGVLRDFLR 282 Y++ I CPS+HFIG D+LK E+L + P ++RH HT+PRLD E++ V+ FL Sbjct: 159 YANKIACPSLHFIGENDFLKVHGEKLIESCVDPFVIRHPKGHTVPRLDDESLVVMHRFLE 218
Query: 281 SVQ 273 ++ Sbjct: 219 KIE 221
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