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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921362
Clone id YMU001_000148_H11
Library
Length 209
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000148_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCCTCGTAATACACAATGGTATGCCGAGTATCATTAAAAGCCTCCAAATCATTTTGGGTC
ACTTCCAAAATACGCCGGAAGTTGGCCGGTAAGACCTTATGGTTGATAGTCGGTCTGAAA
TTAGCTAAAGTAAAAGCCTCTTCCTTGGAGTGTACATGAGACTTGTGAGTTCCGTTCAAT
AACTTCATCTCCCTGTCATAGGCATTCGC
■■Homology search results ■■ -
sp_hit_id Q9JLV2
Definition sp|Q9JLV2|TP4AP_MOUSE Trpc4-associated protein OS=Mus musculus
Align length 25
Score (bit) 29.3
E-value 6.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921362|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_H11.
         (209 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JLV2|TP4AP_MOUSE Trpc4-associated protein OS=Mus musculus G...    29   6.4  
sp|Q8TEL6|TP4AP_HUMAN Trpc4-associated protein OS=Homo sapiens G...    29   6.4  

>sp|Q9JLV2|TP4AP_MOUSE Trpc4-associated protein OS=Mus musculus
           GN=Trpc4ap PE=2 SV=2
          Length = 797

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 86  ANFRRILEVTQNDLEAFNDTRHTIV 12
           ANF RIL VT ++++  ND +HT++
Sbjct: 243 ANFCRILAVTISEMDTGNDDKHTLL 267


>sp|Q8TEL6|TP4AP_HUMAN Trpc4-associated protein OS=Homo sapiens
           GN=TRPC4AP PE=2 SV=2
          Length = 797

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -1

Query: 86  ANFRRILEVTQNDLEAFNDTRHTIV 12
           ANF RIL VT ++++  ND +HT++
Sbjct: 243 ANFCRILAVTISEMDTGNDDKHTLL 267
tr_hit_id A7PL76
Definition tr|A7PL76|A7PL76_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera
Align length 69
Score (bit) 81.3
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921362|Adiantum capillus-veneris mRNA, clone:
YMU001_000148_H11.
         (209 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PL76|A7PL76_VITVI Chromosome chr7 scaffold_20, whole genome...    81   2e-14
tr|Q9SZ07|Q9SZ07_ARATH Putative uncharacterized protein AT4g3442...    80   4e-14
tr|A7P9G2|A7P9G2_VITVI Chromosome chr3 scaffold_8, whole genome ...    80   7e-14
tr|A7NTR3|A7NTR3_VITVI Chromosome chr18 scaffold_1, whole genome...    80   7e-14
tr|Q6NM29|Q6NM29_ARATH At2g15730 OS=Arabidopsis thaliana PE=2 SV=1     78   2e-13
tr|A9S8Z1|A9S8Z1_PHYPA Predicted protein OS=Physcomitrella paten...    78   2e-13
tr|B4FCB1|B4FCB1_MAIZE Putative uncharacterized protein OS=Zea m...    77   3e-13
tr|Q7XIP6|Q7XIP6_ORYSJ Os07g0644200 protein OS=Oryza sativa subs...    77   4e-13
tr|A9TT02|A9TT02_PHYPA Predicted protein OS=Physcomitrella paten...    77   6e-13
tr|B8B546|B8B546_ORYSI Putative uncharacterized protein OS=Oryza...    76   7e-13
tr|B4FJI5|B4FJI5_MAIZE Putative uncharacterized protein OS=Zea m...    76   7e-13
tr|A9RR59|A9RR59_PHYPA Predicted protein (Fragment) OS=Physcomit...    76   9e-13
tr|B4G207|B4G207_MAIZE Putative uncharacterized protein OS=Zea m...    75   2e-12
tr|A3BMR1|A3BMR1_ORYSJ Putative uncharacterized protein OS=Oryza...    75   2e-12
tr|A5C9Q7|A5C9Q7_VITVI Putative uncharacterized protein OS=Vitis...    74   4e-12
tr|B6UBV1|B6UBV1_MAIZE Putative uncharacterized protein OS=Zea m...    73   8e-12
tr|A9REB6|A9REB6_PHYPA Predicted protein (Fragment) OS=Physcomit...    73   8e-12
tr|A7QMF7|A7QMF7_VITVI Chromosome undetermined scaffold_125, who...    72   1e-11
tr|Q10KZ9|Q10KZ9_ORYSJ Nodulation protein, putative, expressed O...    72   2e-11
tr|B8AQ93|B8AQ93_ORYSI Putative uncharacterized protein OS=Oryza...    72   2e-11
tr|A3AI81|A3AI81_ORYSJ Putative uncharacterized protein OS=Oryza...    72   2e-11
tr|Q9SCR3|Q9SCR3_ARATH Putative uncharacterized protein T20E23_2...    71   2e-11
tr|Q6NLV9|Q6NLV9_ARATH At3g50620 OS=Arabidopsis thaliana GN=At3g...    71   2e-11
tr|B6TNA3|B6TNA3_MAIZE Putative uncharacterized protein OS=Zea m...    70   5e-11
tr|B6SKZ1|B6SKZ1_MAIZE Putative uncharacterized protein OS=Zea m...    70   5e-11
tr|B4FSY6|B4FSY6_MAIZE Putative uncharacterized protein OS=Zea m...    70   5e-11
tr|Q5ZAK9|Q5ZAK9_ORYSJ cDNA clone:J013109O21, full insert sequen...    69   1e-10
tr|A2ZYI1|A2ZYI1_ORYSJ Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|A2WVT6|A2WVT6_ORYSI Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|Q84R01|Q84R01_ORYSJ Putative uncharacterized protein OSJNBa00...    62   2e-08

>tr|A7PL76|A7PL76_VITVI Chromosome chr7 scaffold_20, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00019465001
           PE=4 SV=1
          Length = 270

 Score = 81.3 bits (199), Expect = 2e-14
 Identities = 37/69 (53%), Positives = 50/69 (72%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YDRE ++LNGTHKSHVHS +EA  L+N++PTIN   L  + +++ +     LE FN 
Sbjct: 140 ANSYDREARVLNGTHKSHVHSTDEADMLSNYKPTINATTLITDLQQMEKTVAKALEYFNS 199

Query: 29  TRHTIVYYE 3
           TRH I+YYE
Sbjct: 200 TRHIILYYE 208


>tr|Q9SZ07|Q9SZ07_ARATH Putative uncharacterized protein AT4g34420
           OS=Arabidopsis thaliana GN=AT4g34420 PE=4 SV=1
          Length = 403

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 39/69 (56%), Positives = 48/69 (69%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YDR+ KLLNGTHKSH HS +EA  LA ++P IN  +L    R+I E+T   L  FN 
Sbjct: 164 ANSYDRDAKLLNGTHKSHTHSAKEAEILAGYKPMINTTLLINELRQIQEMTLKALTYFNT 223

Query: 29  TRHTIVYYE 3
           TRH +VYYE
Sbjct: 224 TRHILVYYE 232


>tr|A7P9G2|A7P9G2_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036553001
           PE=4 SV=1
          Length = 344

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YDRE K LNGTHKSHVHS  EA  LA ++P+IN  +L  + +++ +     L+ FN 
Sbjct: 212 ANSYDREAKQLNGTHKSHVHSPREAEILAQYKPSINATLLIRDLKQVEDTVAKALQYFNS 271

Query: 29  TRHTIVYYE 3
           TRHTI YYE
Sbjct: 272 TRHTIFYYE 280


>tr|A7NTR3|A7NTR3_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00014765001
           PE=4 SV=1
          Length = 337

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YDR+ KLLNGTHKSHVHS EEA  LA ++PT+N  +L  + +   E     LE F  
Sbjct: 205 ANSYDRDAKLLNGTHKSHVHSTEEAQILAKYKPTVNATLLLPDLKEAEETITKALEYFKS 264

Query: 29  TRHTIVYYE 3
           TRH ++YYE
Sbjct: 265 TRHIVLYYE 273


>tr|Q6NM29|Q6NM29_ARATH At2g15730 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 344

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YDR+ K LNGTHKSHVHS +EA  LA ++P IN  +L  + +++ E+T   L  FN 
Sbjct: 212 ANSYDRDAKPLNGTHKSHVHSPKEAEILARYKPLINTSLLIPDLKQVQEMTSKALAYFNT 271

Query: 29  TRHTIVYYE 3
           TRH  +YYE
Sbjct: 272 TRHIFLYYE 280


>tr|A9S8Z1|A9S8Z1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_182440 PE=4 SV=1
          Length = 306

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN+YD+  K+LNGTHKSHVHS EEA  LA +RP I+   LP N +R+ ++  +    FN 
Sbjct: 174 ANSYDQRAKILNGTHKSHVHSVEEALKLAEYRPVIDVNHLPENLQRVEKMASDAQRLFNK 233

Query: 29  TRHTIVYYE 3
           TR  +VYYE
Sbjct: 234 TRSRLVYYE 242


>tr|B4FCB1|B4FCB1_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 337

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN YD++ K LNGTHKSHVHSKEEA  LA F+P ++   L  N R I +  ++ L+ F  
Sbjct: 204 ANDYDKDAKQLNGTHKSHVHSKEEAEILAKFKPHLDTSTLITNIRNIEKAIRDCLDHFKS 263

Query: 29  TRHTIVYYE 3
           TRH I+YYE
Sbjct: 264 TRHMILYYE 272


>tr|Q7XIP6|Q7XIP6_ORYSJ Os07g0644200 protein OS=Oryza sativa subsp.
           japonica GN=OJ1458_B07.102 PE=2 SV=1
          Length = 337

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 38/69 (55%), Positives = 47/69 (68%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN YDR+ K LNGTHKSHVHSKEEA  LA F+P ++   L  N R   +  ++ L+ FN 
Sbjct: 204 ANDYDRDAKQLNGTHKSHVHSKEEAEILAKFKPVLDVSNLIPNIRNAEKYIRDCLDHFNT 263

Query: 29  TRHTIVYYE 3
           TRH I+YYE
Sbjct: 264 TRHMILYYE 272


>tr|A9TT02|A9TT02_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_197958 PE=4 SV=1
          Length = 378

 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           ANAYDR +K LNGTHKSHVHS EEA  LA +RP ++ K L  N  R+ ++T +    FN+
Sbjct: 246 ANAYDRVVKPLNGTHKSHVHSVEEAMKLAEYRPVVDAKHLFENLARVEQITDDAQRFFNN 305

Query: 29  TRHTIVYYE 3
           TR  +V+YE
Sbjct: 306 TRIRVVHYE 314


>tr|B8B546|B8B546_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_27076 PE=4 SV=1
          Length = 866

 Score = 76.3 bits (186), Expect = 7e-13
 Identities = 38/69 (55%), Positives = 46/69 (66%)
 Frame = -1

Query: 209 ANAYDREMKLLNGTHKSHVHSKEEAFTLANFRPTINHKVLPANFRRILEVTQNDLEAFND 30
           AN YDR  K LNGTHKSHVHSKEEA  LA F+P ++   L  N R   +  ++ L+ FN 
Sbjct: 733 ANDYDRNAKQLNGTHKSHVHSKEEAEILAKFKPVLDVSNLIPNIRNAEKYIRDCLDHFNT 792

Query: 29  TRHTIVYYE 3
           TRH I+YYE
Sbjct: 793 TRHMILYYE 801