BP921363 |
Clone id |
YMU001_000149_A01 |
Library |
YMU01 |
Length |
522 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_A01. |
Accession |
BP921363 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3117Contig1 |
Sequence |
ATCGTGTCGGCCATACAATTCCAAACATCCCCACTCACATCAACGAGTTCTAAATGAACA ATTTTGGCACCAGGGTTACACTGTTTTACACAAATCAAATGCAATTCTTCTTGTTTTGCA TCCTGTAATCTGGTTTGCAGGGGAGAGGAATCCCATTCACAGCTCCCATGCTCTACTACC AATTGCATATGCGTTCCTGATTGAATGGGTACCATACATAGGACACCCGATCACAAGACC ACAGCTATGTATCATCAAAACTCACTTCCCATCAACCGATATCAAGCAAGCATCACAGTG ACAAAACCACACCCAAAAGAACAGAAATTTGCACAAATCAAAAAATTGTGTTCAACCTTC AGCATGGCTCCAAAAACTTAACTTGACTTGTATTCGACACTTCCTGGCTTTGACACATGA GCAAGGTAACCGACAAGGACTCACACTAACCACAGTATGTACATGACGCTACATACCCTA GCAAGGTAACCTTGCTCTGGTATTAATCCCCACGGTCCTCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P23337 |
Definition |
sp|P23337|GYS1_YEAST Glycogen [starch] synthase isoform 1 OS=Saccharomyces cerevisiae |
Align length |
60 |
Score (bit) |
36.2 |
E-value |
0.096 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B5VI42 |
Definition |
tr|B5VI42|B5VI42_YEAS6 YFR015Cp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631) |
Align length |
60 |
Score (bit) |
36.2 |
E-value |
1.0 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921363|Adiantum capillus-veneris mRNA, clone: YMU001_000149_A01. (522 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B5VI42|B5VI42_YEAS6 YFR015Cp-like protein OS=Saccharomyces ce... 36 1.00 tr|B3LUM4|B3LUM4_YEAS1 Glycogen synthase OS=Saccharomyces cerevi... 36 1.00 tr|A7A253|A7A253_YEAS7 UDP-glucose-starch glucosyltransferase OS... 36 1.00 tr|A6S1L2|A6S1L2_BOTFB Putative uncharacterized protein OS=Botry... 36 1.3 tr|A7F6R2|A7F6R2_SCLS1 Putative uncharacterized protein OS=Scler... 35 2.9 tr|B5DP06|B5DP06_DROPS GA27923 OS=Drosophila pseudoobscura pseud... 34 5.0 tr|Q8NT43|Q8NT43_CORGL 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1... 33 6.5 tr|Q93NG0|Q93NG0_ARTNI ORF297 (Putative carbon monoxide dehydrog... 33 6.5 tr|B0WFW8|B0WFW8_CULQU Cyclohex-1-ene-1-carboxyl-CoA hydratase O... 33 6.6 tr|B4P304|B4P304_DROYA GE15788 OS=Drosophila yakuba GN=GE15788 P... 33 8.5 tr|A0DRN2|A0DRN2_PARTE Chromosome undetermined scaffold_60, whol... 33 8.6 tr|Q0UHU0|Q0UHU0_PHANO Putative uncharacterized protein OS=Phaeo... 33 8.6
>tr|B5VI42|B5VI42_YEAS6 YFR015Cp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AWRI1631_60780 PE=4 SV=1 Length = 708
Score = 36.2 bits (82), Expect = 1.00 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2
Query: 89 HKSNAILLVLHPVIWFAGERNPIHSSHALLPIAYAFLIEWVPYIGHPITRPQLCIIKTHF 268 H++N +L+ + V+WF GE + + SSHA++ EW+ + P+ R + + T F Sbjct: 135 HETNDAILLGYVVVWFLGEVSKLDSSHAII----GHFHEWLAGVALPLCRKKRIDVVTIF 190
>tr|B3LUM4|B3LUM4_YEAS1 Glycogen synthase OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_05562 PE=4 SV=1 Length = 708
Score = 36.2 bits (82), Expect = 1.00 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2
Query: 89 HKSNAILLVLHPVIWFAGERNPIHSSHALLPIAYAFLIEWVPYIGHPITRPQLCIIKTHF 268 H++N +L+ + V+WF GE + + SSHA++ EW+ + P+ R + + T F Sbjct: 135 HETNDAILLGYVVVWFLGEVSKLDSSHAII----GHFHEWLAGVALPLCRKKRIDVVTIF 190
>tr|A7A253|A7A253_YEAS7 UDP-glucose-starch glucosyltransferase OS=Saccharomyces cerevisiae (strain YJM789) GN=GSY1 PE=4 SV=1 Length = 708
Score = 36.2 bits (82), Expect = 1.00 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = +2
Query: 89 HKSNAILLVLHPVIWFAGERNPIHSSHALLPIAYAFLIEWVPYIGHPITRPQLCIIKTHF 268 H++N +L+ + V+WF GE + + SSHA++ EW+ + P+ R + + T F Sbjct: 135 HETNDAILLGYVVVWFLGEVSKLDSSHAII----GHFHEWLAGVALPLCRKKRIDVVTIF 190
>tr|A6S1L2|A6S1L2_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_06709 PE=4 SV=1 Length = 2239
Score = 35.8 bits (81), Expect = 1.3 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 9/136 (6%) Frame = +2
Query: 77 YTVLHKSNAILLVLHPVIWFAGERNPIHSSHALLPIAYAFLIEWVPYIGHPITRPQLCII 256 + +SN++ V H V+ F E PI HAL + + W+ G + R QL + Sbjct: 860 FDTTEQSNSV--VQHSVVKFVVESQPISFHHAL-----HYTLSWLIECGKSMPREQLIQL 912
Query: 257 KTHFPSTDIKQASQ*--------QNHTQKNRNLHKSKNCVQPSAWLQKLNLTC-IRHFLA 409 + F + ++ Q + Q ++ ++ + ++ AWL ++ +R+ ++ Sbjct: 913 LS-FTTQELLQKPKPMGQRTMPSQEYSPEDHLMAAFDYPLRVCAWLAQMKANMWVRNGMS 971
Query: 410 LTHEQGNRQGLTLTTV 457 L H+QG +G+TL V Sbjct: 972 LRHQQGTYRGVTLRDV 987
>tr|A7F6R2|A7F6R2_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_13291 PE=4 SV=1 Length = 1412
Score = 34.7 bits (78), Expect = 2.9 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Frame = +2
Query: 77 YTVLHKSNAILLVLHPVIWFAGERNPIHSSHALLPIAYAFLIEWVPYIGHPITRPQLCII 256 + +SN++ + H V+ F E PI HAL + + W+ G + R QL + Sbjct: 850 FDTTEQSNSV--IQHSVVKFVVESQPISFHHAL-----HYTLSWLIECGKGMPRQQLIRL 902
Query: 257 KTHFPSTDIKQASQ*QNHTQKNRNLHKSKNCVQPS--------AWLQKLNLTC-IRHFLA 409 + F + ++ Q + ++ ++ + + AWL ++ +R+ ++ Sbjct: 903 LS-FTTQELLQKPKFMGQRLMPSQVYSPEDHLMAAFDYPLRVCAWLAQMKANMWVRNGMS 961
Query: 410 LTHEQGNRQGLTLTTV 457 L H+QG +G+TL V Sbjct: 962 LRHQQGTYRGVTLRDV 977
>tr|B5DP06|B5DP06_DROPS GA27923 OS=Drosophila pseudoobscura pseudoobscura GN=GA27923 PE=4 SV=1 Length = 843
Score = 33.9 bits (76), Expect = 5.0 Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = +2
Query: 308 HTQKNRNLHKSK-NCVQPSAWLQKLNLTCIRHFLALTHEQGNR 433 HT K + LHKS + V PS L KL T HF A T ++GNR Sbjct: 254 HTMKGKILHKSYLSTVAPS--LSKLKDTLFSHFRAFTDKRGNR 294
>tr|Q8NT43|Q8NT43_CORGL 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (2-OXOGLUTARATE DECARBOXYLASE) OS=Corynebacterium glutamicum GN=menD PE=4 SV=1 Length = 543
Score = 33.5 bits (75), Expect = 6.5 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +2
Query: 8 RPYNSKHPHSHQRVLNEQFWHQGYTVLHKSNAILLVLHPVI 130 +PYN HP + + +L EQ +GY V + + +++V HP + Sbjct: 227 KPYNPVHPLAAEILLKEQVSAEGYVVNTRPDHVIVVGHPTL 267
>tr|Q93NG0|Q93NG0_ARTNI ORF297 (Putative carbon monoxide dehydrogenase subunit D) OS=Arthrobacter nicotinovorans GN=coxD PE=4 SV=1 Length = 297
Score = 33.5 bits (75), Expect = 6.5 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +2
Query: 215 YIGHPITRPQLCIIKTHFPSTDIKQASQ*QNHTQKNRN---LHKSKNCVQPSAWLQKLN 382 +I HP +L IIKT P D K A Q + Q RN L +S + W Q LN Sbjct: 200 WIDHPEPARELEIIKTRLPGVDEKLAQQVVDVVQSLRNQGRLRRSPGVAEALDWAQALN 258
>tr|B0WFW8|B0WFW8_CULQU Cyclohex-1-ene-1-carboxyl-CoA hydratase OS=Culex quinquefasciatus GN=CpipJ_CPIJ006158 PE=4 SV=1 Length = 281
Score = 33.5 bits (75), Expect = 6.6 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%) Frame = +1
Query: 118 ASCNLVCRGEESHSQLPCSTTNCICVPD*MGTIHRTPDHKTTAMYHQNSLPINRYQA--S 291 ASC++V EES P ++ C + P K + M LPIN +A + Sbjct: 139 ASCDMVVCSEESSFSTPGASFGIFCSTPGIAVARAVPRLKASYMLF-TGLPINAQEALQA 197
Query: 292 ITVTKPHPKEQKFAQIKKLC 351 V++ P+E+ A+I+++C Sbjct: 198 GLVSRVVPREELDAEIERIC 217
>tr|B4P304|B4P304_DROYA GE15788 OS=Drosophila yakuba GN=GE15788 PE=4 SV=1 Length = 1366
Score = 33.1 bits (74), Expect = 8.5 Identities = 23/86 (26%), Positives = 39/86 (45%) Frame = +2
Query: 200 IEWVPYIGHPITRPQLCIIKTHFPSTDIKQASQ*QNHTQKNRNLHKSKNCVQPSAWLQKL 379 +EWV +G P+ +P H P T K ++ + N+ K KN P+ ++ L Sbjct: 1197 VEWVTPLGLPVVQPYNRQEMKHSPRTGFKVSANMPMDMYERPNILKQKNAFPPN-FIHSL 1255
Query: 380 NLTCIRHFLALTHEQGNRQGLTLTTV 457 + + + LT RQG+T +V Sbjct: 1256 DSS----HMMLTSLHCERQGITFVSV 1277
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