BP921366 |
Clone id |
YMU001_000149_A04 |
Library |
YMU01 |
Length |
301 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_A04. |
Accession |
BP921366 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTTATTGGAAAGTAAGCTGCACTTTTCATTGCAGAACCTACCCAAAGCTAAGTGCAGCTC TTACTGCGAGCCAGGACAGCTGCAAATGCATATTTATGTACCTCGCTGCCCGAGCAAGGT ACTATAGATTTGCAAAGTGGCATTCTTCATGCAGAGAAGAAGGATTACAAGACAGCCTTC AGTTATTTCTTTGAAGCTTCTGAGGCTTTCAGTGCATTATATGATCCGCGGGCTATTTAC AGCCTGAAGTACATGCTTTTATGCAAGATTATGACCAGCCAGGCAGATGATGTGGGTGGG C |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54UB5 |
Definition |
sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum |
Align length |
78 |
Score (bit) |
72.4 |
E-value |
7.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921366|Adiantum capillus-veneris mRNA, clone: YMU001_000149_A04. (301 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subun... 72 7e-13 sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subun... 64 4e-12 sp|O00231|PSD11_HUMAN 26S proteasome non-ATPase regulatory subun... 64 4e-12 sp|Q2KI42|PSD11_BOVIN 26S proteasome non-ATPase regulatory subun... 64 4e-12 sp|Q9P7S2|RPN6_SCHPO Probable 26S proteasome regulatory subunit ... 55 1e-09 sp|Q12377|RPN6_YEAST 26S proteasome regulatory subunit RPN6 OS=S... 50 3e-06 sp|P34481|YMJ5_CAEEL Uncharacterized protein F59B2.5 OS=Caenorha... 47 6e-06 sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1... 29 8.4
>sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1 Length = 413
Score = 72.4 bits (176), Expect = 7e-13 Identities = 41/78 (52%), Positives = 47/78 (60%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ART AN C Q ID+QSGILH+E+KDYKT L DP A+ Sbjct: 181 LTSARTNANTIYCPP-KLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMK 239
Query: 241 SLKYMLLCKIMTSQADDV 294 +LKYMLLCKIMT+Q DDV Sbjct: 240 ALKYMLLCKIMTNQTDDV 257
>sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus GN=Psmd11 PE=1 SV=3 Length = 422
Score = 64.3 bits (155), Expect(2) = 4e-12 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237 L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248
Query: 238 YSLKYMLLCKIMTSQADDV 294 SLKYMLLCKIM + +DV Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267
Score = 26.2 bits (56), Expect(2) = 4e-12 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESK + +L NLPKA+ + Sbjct: 171 LLESKTYHALSNLPKARAA 189
>sp|O00231|PSD11_HUMAN 26S proteasome non-ATPase regulatory subunit 11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3 Length = 422
Score = 64.3 bits (155), Expect(2) = 4e-12 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237 L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248
Query: 238 YSLKYMLLCKIMTSQADDV 294 SLKYMLLCKIM + +DV Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267
Score = 26.2 bits (56), Expect(2) = 4e-12 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESK + +L NLPKA+ + Sbjct: 171 LLESKTYHALSNLPKARAA 189
>sp|Q2KI42|PSD11_BOVIN 26S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus GN=PSMD11 PE=2 SV=3 Length = 422
Score = 64.3 bits (155), Expect(2) = 4e-12 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237 L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248
Query: 238 YSLKYMLLCKIMTSQADDV 294 SLKYMLLCKIM + +DV Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267
Score = 26.2 bits (56), Expect(2) = 4e-12 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESK + +L NLPKA+ + Sbjct: 171 LLESKTYHALSNLPKARAA 189
>sp|Q9P7S2|RPN6_SCHPO Probable 26S proteasome regulatory subunit rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1 Length = 421
Score = 55.1 bits (131), Expect(2) = 1e-09 Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXL-YDPRAI 237 L A+T+ANA C + QG +DLQSGILHA+ D+KT L D +A+ Sbjct: 188 LTAAKTSANAVYCPPML-QGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDDDKKAL 246
Query: 238 YSLKYMLLCKIMTSQADDV 294 SLKYMLL +IM + +V Sbjct: 247 SSLKYMLLSQIMLNSVSEV 265
Score = 26.9 bits (58), Expect(2) = 1e-09 Identities = 10/19 (52%), Positives = 17/19 (89%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESK++ +++N+PKA+ S Sbjct: 169 LLESKVYHAIRNIPKARAS 187
>sp|Q12377|RPN6_YEAST 26S proteasome regulatory subunit RPN6 OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3 Length = 434
Score = 50.4 bits (119), Expect = 3e-06 Identities = 35/82 (42%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYD----P 228 L ARTAAN+ C + +DL SGILH E KDYKT L Sbjct: 198 LTAARTAANSIYCPT-QTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYE 256
Query: 229 RAIYSLKYMLLCKIMTSQADDV 294 +A LKYMLL KIM + DDV Sbjct: 257 KACQVLKYMLLSKIMLNLIDDV 278
>sp|P34481|YMJ5_CAEEL Uncharacterized protein F59B2.5 OS=Caenorhabditis elegans GN=F59B2.5 PE=2 SV=2 Length = 468
Score = 47.4 bits (111), Expect(2) = 6e-06 Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPE-QGTIDLQSGILH-AEKKDYKTXXXXXXXXXXXXXXLYDP-R 231 LL A+T N+ + P+ Q ++D+QSG+L+ AE++DYKT + D Sbjct: 234 LLTAKTNTNSAFAS--PQLQASVDMQSGVLYSAEERDYKTSFSYFYEAFEGFASIGDKIN 291
Query: 232 AIYSLKYMLLCKIMTSQADDVGG 300 A +LKYM+LCKIM ++ + + G Sbjct: 292 ATSALKYMILCKIMLNETEQLAG 314
Score = 21.9 bits (45), Expect(2) = 6e-06 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +2
Query: 8 ESKLHFSLQNLPKAK 52 ESK F+L NL KAK Sbjct: 217 ESKSSFNLNNLAKAK 231
>sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1731 homolog OS=Rattus norvegicus PE=2 SV=2 Length = 2395
Score = 28.9 bits (63), Expect = 8.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +1
Query: 97 CTSLPEQGTIDLQSGILHAEKKDY 168 CT+LP+QG + + G LHA+ + Sbjct: 1390 CTALPQQGNLTVHPGHLHAQTNSF 1413
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B3VIQ2 |
Definition |
tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus tremula |
Align length |
80 |
Score (bit) |
91.3 |
E-value |
7.0e-22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921366|Adiantum capillus-veneris mRNA, clone: YMU001_000149_A04. (301 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|B3VIQ1|B3VIQ1_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|B3VIP8|B3VIP8_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|B3VIP6|B3VIP6_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|B3VIP5|B3VIP5_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|B3VIP4|B3VIP4_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22 tr|A9PF54|A9PF54_POPTR Putative uncharacterized protein OS=Popul... 91 7e-22 tr|O81694|O81694_ARATH 19S proteosome subunit 9 OS=Arabidopsis t... 91 9e-22 tr|Q9LP45|Q9LP45_ARATH F28N24.15 protein (26S proteasome subunit... 91 9e-22 tr|Q6XJG4|Q6XJG4_ARATH 26S proteasome subunit RPN6a OS=Arabidops... 91 9e-22 tr|Q6XJG1|Q6XJG1_ARATH 26S proteasome subunit RPN6a (Fragment) O... 91 9e-22 tr|B7ZWT2|B7ZWT2_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-21 tr|B6TWL4|B6TWL4_MAIZE 26S proteasome non-ATPase regulatory subu... 89 1e-21 tr|B6T429|B6T429_MAIZE 26S proteasome non-ATPase regulatory subu... 89 1e-21 tr|B4FF65|B4FF65_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-21 tr|Q7X5X9|Q7X5X9_ORYSJ Os04g0444600 protein OS=Oryza sativa subs... 89 1e-21 tr|A2XTW4|A2XTW4_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-21 tr|A5AEB0|A5AEB0_VITVI Putative uncharacterized protein (Chromos... 90 1e-21 tr|B8AL50|B8AL50_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-21 tr|A5BPX8|A5BPX8_VITVI Putative uncharacterized protein (Chromos... 90 2e-21 tr|Q75G86|Q75G86_ORYSJ Os03g0576400 protein OS=Oryza sativa subs... 89 2e-21 tr|A9ST28|A9ST28_PHYPA Predicted protein OS=Physcomitrella paten... 89 4e-19 tr|A9RB85|A9RB85_PHYPA Predicted protein OS=Physcomitrella paten... 89 4e-19 tr|Q1W7I0|Q1W7I0_SOLHA Proteasome regulatory particle subunit (F... 77 3e-17 tr|Q1W7I2|Q1W7I2_SOLPI Proteasome regulatory particle subunit (F... 75 1e-16 tr|Q1W7H6|Q1W7H6_SOLCE Proteasome regulatory particle subunit (F... 75 1e-16 tr|Q1W7H7|Q1W7H7_SOLPE Proteasome regulatory particle subunit (F... 75 1e-16 tr|Q1W7H4|Q1W7H4_9SOLN Proteasome regulatory particle subunit (F... 75 1e-16 tr|Q1W7H9|Q1W7H9_SOLLC Proteasome regulatory particle subunit (F... 74 3e-16 tr|Q1W7H5|Q1W7H5_SOLPN Proteasome regulatory particle subunit (F... 74 3e-16
>tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|B3VIQ1|B3VIQ1_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYRYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|B3VIP8|B3VIP8_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|B3VIP6|B3VIP6_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|B3VIP5|B3VIP5_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|B3VIP4|B3VIP4_POPTN NAC domain protein (Fragment) OS=Populus tremula PE=4 SV=1 Length = 317
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYRYFFEAFEAFNALEDPRAVF 179
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 102 LLESKLHFSLRNLPKAKAA 120
>tr|A9PF54|A9PF54_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 310
Score = 91.3 bits (225), Expect(2) = 7e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 78 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDPRAVF 136
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 137 SLKYMLLCKIMVSQADDVAG 156
Score = 35.8 bits (81), Expect(2) = 7e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 59 LLESKLHFSLRNLPKAKAA 77
>tr|O81694|O81694_ARATH 19S proteosome subunit 9 OS=Arabidopsis thaliana PE=2 SV=1 Length = 421
Score = 90.9 bits (224), Expect(2) = 9e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265
Score = 35.8 bits (81), Expect(2) = 9e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 168 LLESKLHFSLRNLPKAKAA 186
>tr|Q9LP45|Q9LP45_ARATH F28N24.15 protein (26S proteasome subunit RPN6a) (Putative 19S proteosome subunit 9) OS=Arabidopsis thaliana GN=RPN6a PE=2 SV=1 Length = 419
Score = 90.9 bits (224), Expect(2) = 9e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265
Score = 35.8 bits (81), Expect(2) = 9e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 168 LLESKLHFSLRNLPKAKAA 186
>tr|Q6XJG4|Q6XJG4_ARATH 26S proteasome subunit RPN6a OS=Arabidopsis thaliana GN=RPN6a PE=2 SV=1 Length = 419
Score = 90.9 bits (224), Expect(2) = 9e-22 Identities = 50/80 (62%), Positives = 55/80 (68%) Frame = +1
Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240 L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++ Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245
Query: 241 SLKYMLLCKIMTSQADDVGG 300 SLKYMLLCKIM SQADDV G Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265
Score = 35.8 bits (81), Expect(2) = 9e-22 Identities = 16/19 (84%), Positives = 18/19 (94%) Frame = +2
Query: 2 LLESKLHFSLQNLPKAKCS 58 LLESKLHFSL+NLPKAK + Sbjct: 168 LLESKLHFSLRNLPKAKAA 186
|