BP921366
Clone id YMU001_000149_A04
Library
Length 301
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTATTGGAAAGTAAGCTGCACTTTTCATTGCAGAACCTACCCAAAGCTAAGTGCAGCTC
TTACTGCGAGCCAGGACAGCTGCAAATGCATATTTATGTACCTCGCTGCCCGAGCAAGGT
ACTATAGATTTGCAAAGTGGCATTCTTCATGCAGAGAAGAAGGATTACAAGACAGCCTTC
AGTTATTTCTTTGAAGCTTCTGAGGCTTTCAGTGCATTATATGATCCGCGGGCTATTTAC
AGCCTGAAGTACATGCTTTTATGCAAGATTATGACCAGCCAGGCAGATGATGTGGGTGGG
C
■■Homology search results ■■ -
sp_hit_id Q54UB5
Definition sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subunit 11 OS=Dictyostelium discoideum
Align length 78
Score (bit) 72.4
E-value 7.0e-13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921366|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_A04.
(301 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subun... 72 7e-13
sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subun... 64 4e-12
sp|O00231|PSD11_HUMAN 26S proteasome non-ATPase regulatory subun... 64 4e-12
sp|Q2KI42|PSD11_BOVIN 26S proteasome non-ATPase regulatory subun... 64 4e-12
sp|Q9P7S2|RPN6_SCHPO Probable 26S proteasome regulatory subunit ... 55 1e-09
sp|Q12377|RPN6_YEAST 26S proteasome regulatory subunit RPN6 OS=S... 50 3e-06
sp|P34481|YMJ5_CAEEL Uncharacterized protein F59B2.5 OS=Caenorha... 47 6e-06
sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1... 29 8.4

>sp|Q54UB5|PSD11_DICDI 26S proteasome non-ATPase regulatory subunit
11 OS=Dictyostelium discoideum GN=psmD11 PE=2 SV=1
Length = 413

Score = 72.4 bits (176), Expect = 7e-13
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ART AN C Q ID+QSGILH+E+KDYKT L DP A+
Sbjct: 181 LTSARTNANTIYCPP-KLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMK 239

Query: 241 SLKYMLLCKIMTSQADDV 294
+LKYMLLCKIMT+Q DDV
Sbjct: 240 ALKYMLLCKIMTNQTDDV 257


>sp|Q8BG32|PSD11_MOUSE 26S proteasome non-ATPase regulatory subunit
11 OS=Mus musculus GN=Psmd11 PE=1 SV=3
Length = 422

Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237
L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI
Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248

Query: 238 YSLKYMLLCKIMTSQADDV 294
SLKYMLLCKIM + +DV
Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267



Score = 26.2 bits (56), Expect(2) = 4e-12
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESK + +L NLPKA+ +
Sbjct: 171 LLESKTYHALSNLPKARAA 189


>sp|O00231|PSD11_HUMAN 26S proteasome non-ATPase regulatory subunit
11 OS=Homo sapiens GN=PSMD11 PE=1 SV=3
Length = 422

Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237
L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI
Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248

Query: 238 YSLKYMLLCKIMTSQADDV 294
SLKYMLLCKIM + +DV
Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267



Score = 26.2 bits (56), Expect(2) = 4e-12
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESK + +L NLPKA+ +
Sbjct: 171 LLESKTYHALSNLPKARAA 189


>sp|Q2KI42|PSD11_BOVIN 26S proteasome non-ATPase regulatory subunit
11 OS=Bos taurus GN=PSMD11 PE=2 SV=3
Length = 422

Score = 64.3 bits (155), Expect(2) = 4e-12
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHA-EKKDYKTXXXXXXXXXXXXXXLYDPRAI 237
L ART ANA C Q T+D+QSGI+HA E+KD+KT + P+AI
Sbjct: 190 LTSARTTANAIYCPP-KLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAI 248

Query: 238 YSLKYMLLCKIMTSQADDV 294
SLKYMLLCKIM + +DV
Sbjct: 249 TSLKYMLLCKIMLNTPEDV 267



Score = 26.2 bits (56), Expect(2) = 4e-12
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESK + +L NLPKA+ +
Sbjct: 171 LLESKTYHALSNLPKARAA 189


>sp|Q9P7S2|RPN6_SCHPO Probable 26S proteasome regulatory subunit
rpn6 OS=Schizosaccharomyces pombe GN=rpn6 PE=2 SV=1
Length = 421

Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXL-YDPRAI 237
L A+T+ANA C + QG +DLQSGILHA+ D+KT L D +A+
Sbjct: 188 LTAAKTSANAVYCPPML-QGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDDDKKAL 246

Query: 238 YSLKYMLLCKIMTSQADDV 294
SLKYMLL +IM + +V
Sbjct: 247 SSLKYMLLSQIMLNSVSEV 265



Score = 26.9 bits (58), Expect(2) = 1e-09
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESK++ +++N+PKA+ S
Sbjct: 169 LLESKVYHAIRNIPKARAS 187


>sp|Q12377|RPN6_YEAST 26S proteasome regulatory subunit RPN6
OS=Saccharomyces cerevisiae GN=RPN6 PE=1 SV=3
Length = 434

Score = 50.4 bits (119), Expect = 3e-06
Identities = 35/82 (42%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYD----P 228
L ARTAAN+ C + +DL SGILH E KDYKT L
Sbjct: 198 LTAARTAANSIYCPT-QTVAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYE 256

Query: 229 RAIYSLKYMLLCKIMTSQADDV 294
+A LKYMLL KIM + DDV
Sbjct: 257 KACQVLKYMLLSKIMLNLIDDV 278


>sp|P34481|YMJ5_CAEEL Uncharacterized protein F59B2.5
OS=Caenorhabditis elegans GN=F59B2.5 PE=2 SV=2
Length = 468

Score = 47.4 bits (111), Expect(2) = 6e-06
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPE-QGTIDLQSGILH-AEKKDYKTXXXXXXXXXXXXXXLYDP-R 231
LL A+T N+ + P+ Q ++D+QSG+L+ AE++DYKT + D
Sbjct: 234 LLTAKTNTNSAFAS--PQLQASVDMQSGVLYSAEERDYKTSFSYFYEAFEGFASIGDKIN 291

Query: 232 AIYSLKYMLLCKIMTSQADDVGG 300
A +LKYM+LCKIM ++ + + G
Sbjct: 292 ATSALKYMILCKIMLNETEQLAG 314



Score = 21.9 bits (45), Expect(2) = 6e-06
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2

Query: 8 ESKLHFSLQNLPKAK 52
ESK F+L NL KAK
Sbjct: 217 ESKSSFNLNNLAKAK 231


>sp|A4L9P8|K1731_RAT Leucine-rich repeat-containing protein KIAA1731
homolog OS=Rattus norvegicus PE=2 SV=2
Length = 2395

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1

Query: 97 CTSLPEQGTIDLQSGILHAEKKDY 168
CT+LP+QG + + G LHA+ +
Sbjct: 1390 CTALPQQGNLTVHPGHLHAQTNSF 1413


tr_hit_id B3VIQ2
Definition tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus tremula
Align length 80
Score (bit) 91.3
E-value 7.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921366|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_A04.
(301 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|B3VIQ1|B3VIQ1_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|B3VIP8|B3VIP8_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|B3VIP6|B3VIP6_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|B3VIP5|B3VIP5_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|B3VIP4|B3VIP4_POPTN NAC domain protein (Fragment) OS=Populus ... 91 7e-22
tr|A9PF54|A9PF54_POPTR Putative uncharacterized protein OS=Popul... 91 7e-22
tr|O81694|O81694_ARATH 19S proteosome subunit 9 OS=Arabidopsis t... 91 9e-22
tr|Q9LP45|Q9LP45_ARATH F28N24.15 protein (26S proteasome subunit... 91 9e-22
tr|Q6XJG4|Q6XJG4_ARATH 26S proteasome subunit RPN6a OS=Arabidops... 91 9e-22
tr|Q6XJG1|Q6XJG1_ARATH 26S proteasome subunit RPN6a (Fragment) O... 91 9e-22
tr|B7ZWT2|B7ZWT2_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-21
tr|B6TWL4|B6TWL4_MAIZE 26S proteasome non-ATPase regulatory subu... 89 1e-21
tr|B6T429|B6T429_MAIZE 26S proteasome non-ATPase regulatory subu... 89 1e-21
tr|B4FF65|B4FF65_MAIZE Putative uncharacterized protein OS=Zea m... 89 1e-21
tr|Q7X5X9|Q7X5X9_ORYSJ Os04g0444600 protein OS=Oryza sativa subs... 89 1e-21
tr|A2XTW4|A2XTW4_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-21
tr|A5AEB0|A5AEB0_VITVI Putative uncharacterized protein (Chromos... 90 1e-21
tr|B8AL50|B8AL50_ORYSI Putative uncharacterized protein OS=Oryza... 89 2e-21
tr|A5BPX8|A5BPX8_VITVI Putative uncharacterized protein (Chromos... 90 2e-21
tr|Q75G86|Q75G86_ORYSJ Os03g0576400 protein OS=Oryza sativa subs... 89 2e-21
tr|A9ST28|A9ST28_PHYPA Predicted protein OS=Physcomitrella paten... 89 4e-19
tr|A9RB85|A9RB85_PHYPA Predicted protein OS=Physcomitrella paten... 89 4e-19
tr|Q1W7I0|Q1W7I0_SOLHA Proteasome regulatory particle subunit (F... 77 3e-17
tr|Q1W7I2|Q1W7I2_SOLPI Proteasome regulatory particle subunit (F... 75 1e-16
tr|Q1W7H6|Q1W7H6_SOLCE Proteasome regulatory particle subunit (F... 75 1e-16
tr|Q1W7H7|Q1W7H7_SOLPE Proteasome regulatory particle subunit (F... 75 1e-16
tr|Q1W7H4|Q1W7H4_9SOLN Proteasome regulatory particle subunit (F... 75 1e-16
tr|Q1W7H9|Q1W7H9_SOLLC Proteasome regulatory particle subunit (F... 74 3e-16
tr|Q1W7H5|Q1W7H5_SOLPN Proteasome regulatory particle subunit (F... 74 3e-16

>tr|B3VIQ2|B3VIQ2_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|B3VIQ1|B3VIQ1_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYRYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|B3VIP8|B3VIP8_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|B3VIP6|B3VIP6_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|B3VIP5|B3VIP5_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|B3VIP4|B3VIP4_POPTN NAC domain protein (Fragment) OS=Populus
tremula PE=4 SV=1
Length = 317

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 121 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYRYFFEAFEAFNALEDPRAVF 179

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 180 SLKYMLLCKIMVSQADDVAG 199



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 102 LLESKLHFSLRNLPKAKAA 120


>tr|A9PF54|A9PF54_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 310

Score = 91.3 bits (225), Expect(2) = 7e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 78 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDPRAVF 136

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 137 SLKYMLLCKIMVSQADDVAG 156



Score = 35.8 bits (81), Expect(2) = 7e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 59 LLESKLHFSLRNLPKAKAA 77


>tr|O81694|O81694_ARATH 19S proteosome subunit 9 OS=Arabidopsis
thaliana PE=2 SV=1
Length = 421

Score = 90.9 bits (224), Expect(2) = 9e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265



Score = 35.8 bits (81), Expect(2) = 9e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 168 LLESKLHFSLRNLPKAKAA 186


>tr|Q9LP45|Q9LP45_ARATH F28N24.15 protein (26S proteasome subunit
RPN6a) (Putative 19S proteosome subunit 9)
OS=Arabidopsis thaliana GN=RPN6a PE=2 SV=1
Length = 419

Score = 90.9 bits (224), Expect(2) = 9e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265



Score = 35.8 bits (81), Expect(2) = 9e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 168 LLESKLHFSLRNLPKAKAA 186


>tr|Q6XJG4|Q6XJG4_ARATH 26S proteasome subunit RPN6a OS=Arabidopsis
thaliana GN=RPN6a PE=2 SV=1
Length = 419

Score = 90.9 bits (224), Expect(2) = 9e-22
Identities = 50/80 (62%), Positives = 55/80 (68%)
Frame = +1

Query: 61 LLRARTAANAYLCTSLPEQGTIDLQSGILHAEKKDYKTXXXXXXXXXXXXXXLYDPRAIY 240
L ARTAANA + +QGTIDLQSGILHAE+KDYKT L DPRA++
Sbjct: 187 LTAARTAANA-IYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAVF 245

Query: 241 SLKYMLLCKIMTSQADDVGG 300
SLKYMLLCKIM SQADDV G
Sbjct: 246 SLKYMLLCKIMVSQADDVAG 265



Score = 35.8 bits (81), Expect(2) = 9e-22
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2

Query: 2 LLESKLHFSLQNLPKAKCS 58
LLESKLHFSL+NLPKAK +
Sbjct: 168 LLESKLHFSLRNLPKAKAA 186