| BP921371 |
| Clone id |
YMU001_000149_A10 |
| Library |
YMU01 |
| Length |
525 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_A10. |
| Accession |
BP921371 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TCCTGCTGCCATGGCTAATTGAGCTTTGGGAGGAAATTGGCAGCTCTGACAACGTGTCCA
AGTCTTCGCTATCACGGTCTTGCCGCATCACTGTCAAAGCTCTGGTCAACCTGCCGGCCT
CGTCATCGCTCACTGCTTGTCGTCCATCCCCCACCCTCACTAGAGCCCTTGCATCAGCAT
TGCTCTGTTGAGCTTGCCCAACCCTGCCAAATCTAAGAGAGGAGTCCTCTTGTATCTCAG
GAAGCTGCTGTTGACGCTGGTCTTCGACAGTAGAGGCTTGCTGTATGCCAGTGGCAACTG
CTGCTGCAAGCATCGCATCAAACTCCATGCTAAGAGTCCTTCCATTTGCAGATCCTAGAG
AAAGCTCGGACACCGCTTCGGATGCTGTTCTATAAAGGCCGCTGCTCCTGCTCAAAGAAA
TCATATCTGACTCTTGGGGTTGAGGGTGTAGATGTGACATACGAGCTGTGTTGATCTCTT
CGACGGGTGGTTTCTTGCTCCTATCCTCCATCACATGCTTCTCAT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q4K5Z7 |
| Definition |
sp|Q4K5Z7|HMUV_PSEF5 Hemin import ATP-binding protein hmuV OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) |
| Align length |
55 |
| Score (bit) |
33.9 |
| E-value |
0.49 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q16AM3 |
| Definition |
tr|Q16AM3|Q16AM3_ROSDO Chromosome segregation protein, putative OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) |
| Align length |
113 |
| Score (bit) |
42.4 |
| E-value |
0.014 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921371|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_A10.
(525 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q16AM3|Q16AM3_ROSDO Chromosome segregation protein, putative ... 42 0.014
tr|A8LKR9|A8LKR9_DINSH Chromosome segregation protein SMC OS=Din... 40 0.071
tr|A9HEZ8|A9HEZ8_9RHOB Chromosome segregation protein, putative ... 38 0.35
tr|A9DCV6|A9DCV6_9RHIZ Putative uncharacterized protein OS=Hoefl... 38 0.35
tr|B4LIM4|B4LIM4_DROVI GJ21455 OS=Drosophila virilis GN=GJ21455 ... 38 0.35
tr|B0WGJ9|B0WGJ9_CULQU Zinc finger protein OS=Culex quinquefasci... 37 0.78
tr|Q2GRN6|Q2GRN6_CHAGB Putative uncharacterized protein OS=Chaet... 36 1.0
tr|Q0UIX2|Q0UIX2_PHANO Putative uncharacterized protein OS=Phaeo... 36 1.0
tr|Q2GYU8|Q2GYU8_CHAGB Putative uncharacterized protein OS=Chaet... 36 1.3
tr|Q135A6|Q135A6_RHOPS Methyl-accepting chemotaxis sensory trans... 35 1.7
tr|A6FM99|A6FM99_9RHOB Multisensor hybrid histidine kinase OS=Ro... 35 1.7
tr|B3NR62|B3NR62_DROER GG20441 OS=Drosophila erecta GN=GG20441 P... 35 1.7
tr|Q0RI38|Q0RI38_FRAAA Putative uncharacterized protein OS=Frank... 35 2.3
tr|Q17FQ5|Q17FQ5_AEDAE Zinc finger protein OS=Aedes aegypti GN=A... 35 2.3
tr|B4LA56|B4LA56_DROMO GI14484 OS=Drosophila mojavensis GN=GI144... 35 2.3
tr|Q5ATX3|Q5ATX3_EMENI Putative uncharacterized protein OS=Emeri... 35 2.3
tr|Q2GZ62|Q2GZ62_CHAGB Predicted protein OS=Chaetomium globosum ... 35 2.3
tr|Q2GR93|Q2GR93_CHAGB Putative uncharacterized protein OS=Chaet... 35 2.3
tr|A4F5Y7|A4F5Y7_SACEN Endo-1,4-beta-glucanase OS=Saccharopolysp... 35 3.0
tr|A5PLI1|A5PLI1_DANRE Zgc:165627 protein OS=Danio rerio GN=zgc:... 34 3.9
tr|A7CGZ9|A7CGZ9_BURPI Putative uncharacterized protein OS=Ralst... 34 3.9
tr|A6DWJ2|A6DWJ2_9RHOB SMC protein OS=Roseovarius sp. TM1035 GN=... 34 3.9
tr|B4LBL8|B4LBL8_DROVI GJ13997 OS=Drosophila virilis GN=GJ13997 ... 34 3.9
tr|B3P3P1|B3P3P1_DROER GG16878 OS=Drosophila erecta GN=GG16878 P... 34 3.9
tr|Q3UQR8|Q3UQR8_MOUSE Putative uncharacterized protein OS=Mus m... 34 4.0
tr|Q09A78|Q09A78_STIAU Hemin ABC transporter, ATP-binding protei... 34 4.0
tr|A9WPP5|A9WPP5_RENSM Hypothetical membrane protein OS=Renibact... 34 5.1
tr|Q10KI0|Q10KI0_ORYSJ SAP domain containing protein, expressed ... 34 5.1
tr|A3AIK4|A3AIK4_ORYSJ Putative uncharacterized protein OS=Oryza... 34 5.1
tr|B4KUH5|B4KUH5_DROMO GI18378 OS=Drosophila mojavensis GN=GI183... 34 5.1
>tr|Q16AM3|Q16AM3_ROSDO Chromosome segregation protein, putative
OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=smc PE=4 SV=1
Length = 1169
Score = 42.4 bits (98), Expect = 0.014
Identities = 32/113 (28%), Positives = 50/113 (44%)
Frame = -3
Query: 415 LSRSSGLYRTASEAVSELSLGSANGRTLSMEFDAMLAAAVATGIQQASTVEDQRQQQLPE 236
+ R GL R A E ++ L + + D LAAA A ++A+ V R+ ++ E
Sbjct: 346 IEREGGLNRDAGETIARLEWEAQELEKAAEGHDEALAAA-AEAAREAAAVLQTREGEMSE 404
Query: 235 IQEDSSLRFGRVGQAQQSNADARALVRVGDGRQAVSDDEAGRLTRALTVMRQD 77
ED + R G AQ+ D+R + A + + T+ALT R D
Sbjct: 405 QTEDVARLAARHGSAQRLLEDSRKTKEKAESEAAKAREAVAASTQALTKARSD 457
>tr|A8LKR9|A8LKR9_DINSH Chromosome segregation protein SMC
OS=Dinoroseobacter shibae (strain DFL 12) GN=Dshi_0163
PE=4 SV=1
Length = 1150
Score = 40.0 bits (92), Expect = 0.071
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Frame = -3
Query: 415 LSRSSGLYRTASEAVSELSLGSANGRTLSMEFDAMLAAAVATGIQQASTVEDQRQQQLPE 236
++R L R A E +++L A S+ D LAAA A Q AS V R+ E
Sbjct: 328 IAREEELNRDAGETIAKLDWEQAQIAKASVGHDEKLAAA-AEAAQAASEVLTDRETTQSE 386
Query: 235 IQEDSSLRFGRVGQAQQ-----SNADARALVRVGDGRQAVSDDEAGRLTRALTVMRQDRD 71
+ ED + R Q+ A+ RA +VG A+S+ +AG + +RD
Sbjct: 387 MTEDVARLAARHQSTQRLLQEAGRAETRAQEQVGRAEAALSEAQAGLCDAETRFVAAERD 446
Query: 70 SE 65
+
Sbjct: 447 QQ 448
>tr|A9HEZ8|A9HEZ8_9RHOB Chromosome segregation protein, putative
OS=Roseobacter litoralis Och 149 GN=RLO149_06288 PE=4
SV=1
Length = 1151
Score = 37.7 bits (86), Expect = 0.35
Identities = 29/108 (26%), Positives = 47/108 (43%)
Frame = -3
Query: 415 LSRSSGLYRTASEAVSELSLGSANGRTLSMEFDAMLAAAVATGIQQASTVEDQRQQQLPE 236
+ R GL R A E ++ L + + D LAAA A ++A+ V R+ ++ E
Sbjct: 328 IEREGGLNRDAGETIARLEWEAQELEKAAEGHDEALAAA-AEAAREAAAVLQTREGEMSE 386
Query: 235 IQEDSSLRFGRVGQAQQSNADARALVRVGDGRQAVSDDEAGRLTRALT 92
ED + R G AQ+ D+R + + + T+ALT
Sbjct: 387 QTEDVARLAARHGSAQRLLEDSRKTKEKAESEATKAREAVAASTQALT 434
>tr|A9DCV6|A9DCV6_9RHIZ Putative uncharacterized protein OS=Hoeflea
phototrophica DFL-43 GN=HPDFL43_07032 PE=4 SV=1
Length = 272
Score = 37.7 bits (86), Expect = 0.35
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = -3
Query: 484 VEEINTARMSHLHPQPQESDMISLSRSSGLYRTASEAVSELSLGSANGRTLSMEFDAMLA 305
V E TA ++ H + + S S SG+ + A V E + + G T+S F + +A
Sbjct: 20 VAEAGTAMLA-THRAVYDLTLKSASERSGISQMAGRMVYEFNGSACEGYTVSFRFVSEIA 78
Query: 304 AAVATGI--QQASTVEDQRQQQLPEIQEDSSLRF-GRVGQAQQSNADARALVRVGDGRQA 134
T + QQ +T ED R D + RF R QQ + + R GDG+ A
Sbjct: 79 TGDDTRVTDQQTTTFEDVR---------DRTFRFVTRSFVNQQLDRETRGAATAGDGQLA 129
Query: 133 VSDDEAGRL 107
++ ++ ++
Sbjct: 130 ITLEQPEKM 138
>tr|B4LIM4|B4LIM4_DROVI GJ21455 OS=Drosophila virilis GN=GJ21455
PE=4 SV=1
Length = 1759
Score = 37.7 bits (86), Expect = 0.35
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = -3
Query: 451 LHPQPQESDMISLSRSSGLYRTASEAVSELSLGSANGRTLSME-FDAMLAAAVATGIQQA 275
L Q Q+ + L +++ + A+ A +ANG T E F +AAA+A QQ
Sbjct: 576 LKQQQQQQQQLQLQQAAAVKAAAAAATP-----TANGTTNLQELFQQQIAAAIAAQQQQQ 630
Query: 274 STVEDQRQQQLPEIQEDSSLRFGRVGQAQ 188
+ Q+QQQ + Q+ R G AQ
Sbjct: 631 QQQQHQQQQQQQQHQQQQFQRLGAAAAAQ 659
>tr|B0WGJ9|B0WGJ9_CULQU Zinc finger protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ005812 PE=4 SV=1
Length = 773
Score = 36.6 bits (83), Expect = 0.78
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -3
Query: 508 EDRSKKPPVEEINTARMSHLHPQPQESDM-ISLSRSSGLYRTASEAVSELSLG--SANGR 338
+ S +PP + T + +D +SL+R +++++ S S G SA+ +
Sbjct: 255 DPNSGEPPAKAAKTGKQYACTQCSYSADKKVSLNRHMRMHQSSPAPSSNASNGDDSASQQ 314
Query: 337 TLSMEFDAMLAAAVATGIQQASTVEDQRQQQ 245
L ++F A AAA A A+ ++ Q+QQQ
Sbjct: 315 QLQLQFQAQAAAAAAAAAAAAAVMQQQQQQQ 345
>tr|Q2GRN6|Q2GRN6_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_09368 PE=4 SV=1
Length = 672
Score = 36.2 bits (82), Expect = 1.0
Identities = 35/151 (23%), Positives = 62/151 (41%)
Frame = -3
Query: 523 EKHVMEDRSKKPPVEEINTARMSHLHPQPQESDMISLSRSSGLYRTASEAVSELSLGSAN 344
++HV +D S+ P VE + M + P++ + R G T S A + G +
Sbjct: 67 QQHVGDDDSRNPNVEVVGIMPMPDIPLDPRQ--VKGKGRPVGAIATPSAASRKKGAGVNS 124
Query: 343 GRTLSMEFDAMLAAAVATGIQQASTVEDQRQQQLPEIQEDSSLRFGRVGQAQQSNADARA 164
+ L F+ + + T + Q+QQQ + S+ RFG A + A A
Sbjct: 125 TKRLPSAFEYNIEDELTTAVPAPK----QQQQQQQQAGAASTKRFG---PAAPPPSTAPA 177
Query: 163 LVRVGDGRQAVSDDEAGRLTRALTVMRQDRD 71
+ +G GR ++ + L R+D +
Sbjct: 178 ALGLGQGRAIEGSSRIEQVQQGLRGRRRDAE 208
>tr|Q0UIX2|Q0UIX2_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_08292 PE=4 SV=2
Length = 598
Score = 36.2 bits (82), Expect = 1.0
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = -3
Query: 439 PQESDMISLSRSSGLYRTASEAVSELSLGSANGRTLS---MEFDAMLAAAVATGIQQAST 269
PQ D + ++SGLY E VS + GS L+ E DA A V T QQ
Sbjct: 306 PQRLDSLKPIKTSGLYELGPEDVSPIDDGSERRLQLADEGEEVDAHSATPVETKAQQPGV 365
Query: 268 VEDQRQQQLPEIQEDSSLRFGRVGQAQQSNADARALVRVGDGRQAVSDDEAGRLTRALTV 89
V QR+ L +++ RF V +A+ +A+ V ++ +++ EA + L V
Sbjct: 366 V--QRRSPLQVVED----RFLDVAEAE---LEAKKRVAKLAAKKRIAELEAKKYAAELEV 416
Query: 88 MRQDRD 71
+ D +
Sbjct: 417 KKYDAE 422
>tr|Q2GYU8|Q2GYU8_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_06856 PE=4 SV=1
Length = 684
Score = 35.8 bits (81), Expect = 1.3
Identities = 35/151 (23%), Positives = 61/151 (40%)
Frame = -3
Query: 523 EKHVMEDRSKKPPVEEINTARMSHLHPQPQESDMISLSRSSGLYRTASEAVSELSLGSAN 344
++HV +D S+ P VE + M + P++ + R G T S A + G +
Sbjct: 441 QQHVGDDDSRNPNVEVVGIMPMPDIPLDPRQ--VKGKGRPVGAIATTSAASRKKGAGVNS 498
Query: 343 GRTLSMEFDAMLAAAVATGIQQASTVEDQRQQQLPEIQEDSSLRFGRVGQAQQSNADARA 164
+ L F+ + + T + Q+QQQ + S+ RFG A A A
Sbjct: 499 TKRLPSAFEYNIEDELTTAVPAPK----QQQQQQQQAGAASTKRFG---PAPPPPLTAPA 551
Query: 163 LVRVGDGRQAVSDDEAGRLTRALTVMRQDRD 71
+ +G GR ++ + L R+D +
Sbjct: 552 ALGLGQGRAIEGSSRIEQVQQGLRGRRRDAE 582
>tr|Q135A6|Q135A6_RHOPS Methyl-accepting chemotaxis sensory
transducer OS=Rhodopseudomonas palustris (strain BisB5)
GN=RPD_3107 PE=4 SV=1
Length = 674
Score = 35.4 bits (80), Expect = 1.7
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Frame = -3
Query: 514 VMEDRSKKPPVEEINTARMSHLHPQPQESDMISLSRS-----SGLYRTASEAVSELSLGS 350
+ + +K E +RM H Q +++DM+ L+ S + T S A +EL +
Sbjct: 367 ISRNAEQKAREEAETQSRMEHAAAQRRKADMMQLADSFEAAVGDIVETVSSASTELEASA 426
Query: 349 ---ANGRTLSMEFDAMLAAA---VATGIQQASTVEDQRQQQLPEI--QEDSSLRFGR--V 200
+ S E M+AAA T +Q ++ ++ + EI Q SS R V
Sbjct: 427 TKLTSTAERSQELTTMVAAASEEATTNVQSVASATEELSSSVNEISRQVQSSARMANDAV 486
Query: 199 GQAQQSNAD----ARALVRVGD 146
QA+ +N ++A R+GD
Sbjct: 487 DQARATNDRVSELSKAAARIGD 508
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