BP921372 |
Clone id |
YMU001_000149_A12 |
Library |
YMU01 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_A12. |
Accession |
BP921372 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1467Contig1 |
Sequence |
TTTTTTTATTGTTTTATGAGAATGTACTAAAAAGATTTCAAAGCACAACTTGAAGGAAAT ACAAAACCAGTTTGTTTGCTGTACAACAAACGATCCTTGCGCAGCCGCAAGAGCTTACAA AAGGAGGAAATATAGCTATACTACAAGGGACATGTATGCATAGCCAAATGGCAAGACCTT CATATACAGCTGTAAAACCCTTTGTATATCACATATACAAATCTTAGCCCAGGACTGTAA CCATAGCTGGTGCATCCGTGCGCTTCCCTGAAAGACACCGGTATGCTACAAACTGTGTTG GAGCCCCCGGCTCATCTATCAGCTCTACGTTCCAATTATCCAGTGTCAAAGGAAGTAAAT CCCTTCCTGTTCCAGTCGACTTGTAACCTTGAGCCCACACATAATTTAGGGATTTCATCC CAAAAACAGAACTTGCAAGCGCCCTTTCAGTAAAAACGCAGTCACGAATTTCCAGTCTCT TTAGGTTAGGGCAAACCGTTCGCAAAGAGCGTGATCCCTTTGTCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04197 |
Definition |
sp|O04197|COI1_ARATH Coronatine-insensitive protein 1 OS=Arabidopsis thaliana |
Align length |
113 |
Score (bit) |
87.8 |
E-value |
3.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q84QA7 |
Definition |
tr|Q84QA7|Q84QA7_ORYSJ Os03g0265500 protein OS=Oryza sativa subsp. japonica |
Align length |
105 |
Score (bit) |
89.0 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921372|Adiantum capillus-veneris mRNA, clone: YMU001_000149_A12. (526 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q84QA7|Q84QA7_ORYSJ Os03g0265500 protein OS=Oryza sativa subs... 89 1e-16 tr|A2XEV1|A2XEV1_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|B2BDT6|B2BDT6_ARALY Coronitine insensitive 1 OS=Arabidopsis l... 88 3e-16 tr|B2BDT5|B2BDT5_ARALY Coronitine insensitive 1 OS=Arabidopsis l... 88 3e-16 tr|B2BDA3|B2BDA3_ARATH Coronitine insensitive 1 OS=Arabidopsis t... 88 3e-16 tr|B2BD96|B2BD96_ARATH Coronitine insensitive 1 OS=Arabidopsis t... 88 3e-16 tr|B2BD84|B2BD84_ARATH Coronitine insensitive 1 OS=Arabidopsis t... 88 3e-16 tr|A7PIC7|A7PIC7_VITVI Chromosome chr13 scaffold_17, whole genom... 87 7e-16 tr|B8A2B8|B8A2B8_MAIZE Putative uncharacterized protein OS=Zea m... 86 1e-15 tr|Q5VJQ1|Q5VJQ1_TOBAC Coronatine-insensitive 1 (Fragment) OS=Ni... 85 3e-15 tr|B6TPN4|B6TPN4_MAIZE Coronatine-insensitive protein 1 OS=Zea m... 85 3e-15 tr|Q6TDU2|Q6TDU2_SOLLC Coronatine-insensitive 1 OS=Solanum lycop... 83 1e-14 tr|Q60EH4|Q60EH4_ORYSJ Os05g0449500 protein OS=Oryza sativa subs... 82 2e-14 tr|A3B4L5|A3B4L5_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A2Y589|A2Y589_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A8HSC8|A8HSC8_HEVBR Coronatine-insensitive 1 OS=Hevea brasili... 81 4e-14 tr|B8LQ74|B8LQ74_PICSI Putative uncharacterized protein OS=Picea... 80 6e-14 tr|B6SW30|B6SW30_MAIZE Coronatine-insensitive protein 1 OS=Zea m... 80 8e-14 tr|Q6Y9P5|Q6Y9P5_ORYSJ COI1 (Putative uncharacterized protein) (... 79 1e-13 tr|A2WX30|A2WX30_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|Q8H6H7|Q8H6H7_SOYBN Putative coronatine-insensitive 1 (Fragme... 71 3e-11 tr|Q45FY8|Q45FY8_SOYBN Coronatine-insensitive 1 OS=Glycine max G... 71 4e-11 tr|B6C7B5|B6C7B5_PEA Coronatine-insensitive 1-like protein OS=Pi... 70 7e-11 tr|A9TE08|A9TE08_PHYPA TLP2B TIR1-like auxin receptor protein OS... 67 4e-10 tr|A0MNW9|A0MNW9_9SOLA Coronatine-insensitive 1 OS=Nicotiana att... 64 4e-09 tr|A9RRX8|A9RRX8_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|A9TP16|A9TP16_PHYPA TLP2A TIR1-like auxin receptor protein OS... 60 9e-08 tr|B7FLL6|B7FLL6_MEDTR Putative uncharacterized protein OS=Medic... 56 1e-06 tr|A9TAY1|A9TAY1_PHYPA TIRB2 TIR1-like auxin receptor protein OS... 55 2e-06 tr|A9SZ50|A9SZ50_PHYPA TLP3C TIR1-like auxin receptor protein OS... 55 2e-06
>tr|Q84QA7|Q84QA7_ORYSJ Os03g0265500 protein OS=Oryza sativa subsp. japonica GN=OJ1012B02.14 PE=2 SV=1 Length = 589
Score = 89.0 bits (219), Expect = 1e-16 Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 6/105 (5%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G L T CP+L++LE+R C F+ERALA +V +KSL Y+W QGYK++ G DL+ + Sbjct: 481 SDQGLLQLSTGCPSLQKLELRGCFFSERALAVAVLQLKSLRYLWVQGYKASPNGTDLMAM 540
Query: 346 TLDNWNVELI----DE--PGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+E+I DE P Q +AY L+G R+D P V L Sbjct: 541 VRPFWNIEIIAPNQDEVCPDGQAQILAYYSLAGMRSDYPHSVIPL 585
>tr|A2XEV1|A2XEV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10865 PE=4 SV=1 Length = 589
Score = 89.0 bits (219), Expect = 1e-16 Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 6/105 (5%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G L T CP+L++LE+R C F+ERALA +V +KSL Y+W QGYK++ G DL+ + Sbjct: 481 SDQGLLQLSTGCPSLQKLELRGCFFSERALAVAVLQLKSLRYLWVQGYKASPNGTDLMAM 540
Query: 346 TLDNWNVELI----DE--PGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+E+I DE P Q +AY L+G R+D P V L Sbjct: 541 VRPFWNIEIIAPNQDEVCPDGQAQILAYYSLAGMRSDYPHSVIPL 585
>tr|B2BDT6|B2BDT6_ARALY Coronitine insensitive 1 OS=Arabidopsis lyrata GN=COI1 PE=4 SV=1 Length = 592
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 14/113 (12%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CPNL++LE+R C F+ERA+A++V + SL Y+W QGY+++ TG+DL+ + Sbjct: 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQM 535
Query: 346 TLDNWNVELID--------------EPGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI E P +AY L+G+RTD P V VL Sbjct: 536 ARPYWNIELIPSRKVPEVNQLGEIREMEHPAHILAYYSLAGQRTDCPTTVIVL 588
>tr|B2BDT5|B2BDT5_ARALY Coronitine insensitive 1 OS=Arabidopsis lyrata GN=COI1 PE=4 SV=1 Length = 593
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 14/113 (12%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CPNL++LE+R C F+ERA+A++V + SL Y+W QGY+++ TG+DL+ + Sbjct: 477 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQM 536
Query: 346 TLDNWNVELID--------------EPGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI E P +AY L+G+RTD P V VL Sbjct: 537 ARPYWNIELIPSRKVPEVNQLGEIREMEHPAHILAYYSLAGQRTDCPTTVIVL 589
>tr|B2BDA3|B2BDA3_ARATH Coronitine insensitive 1 OS=Arabidopsis thaliana GN=COI1 PE=4 SV=1 Length = 592
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 14/113 (12%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CPNL++LE+R C F+ERA+A++V + SL Y+W QGY+++ TG+DL+ + Sbjct: 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQM 535
Query: 346 TLDNWNVELID--------------EPGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI E P +AY L+G+RTD P V VL Sbjct: 536 ARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588
>tr|B2BD96|B2BD96_ARATH Coronitine insensitive 1 OS=Arabidopsis thaliana GN=COI1 PE=4 SV=1 Length = 592
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 14/113 (12%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CPNL++LE+R C F+ERA+A++V + SL Y+W QGY+++ TG+DL+ + Sbjct: 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASVTGQDLMQM 535
Query: 346 TLDNWNVELID--------------EPGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI E P +AY L+G+RTD P V VL Sbjct: 536 ARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588
>tr|B2BD84|B2BD84_ARATH Coronitine insensitive 1 OS=Arabidopsis thaliana GN=COI1 PE=4 SV=1 Length = 592
Score = 87.8 bits (216), Expect = 3e-16 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 14/113 (12%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CPNL++LE+R C F+ERA+A++V + SL Y+W QGY+++ TG+DL+ + Sbjct: 476 SDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQM 535
Query: 346 TLDNWNVELID--------------EPGAPTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI E P +AY L+G+RTD P V VL Sbjct: 536 ARPYWNIELIPSRRVPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTVRVL 588
>tr|A7PIC7|A7PIC7_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018291001 PE=4 SV=1 Length = 598
Score = 86.7 bits (213), Expect = 7e-16 Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 14/102 (13%) Frame = -1
Query: 493 CPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPLTLDNWNVELID 314 CP+L++LE+R C F+ERALA + + SL Y+W QGY+++ TGRDLL + WN+ELI Sbjct: 489 CPSLQKLEMRGCCFSERALAVAAMQLTSLRYLWVQGYRASETGRDLLVMARPFWNIELIP 548
Query: 313 EPGA--------------PTQFVAYRCLSGKRTDAPAMVTVL 230 G P +AY L+G RTD P+ VT L Sbjct: 549 SRGVTINAPDREPVSIEHPAHILAYYSLAGPRTDFPSTVTPL 590
>tr|B8A2B8|B8A2B8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 599
Score = 85.5 bits (210), Expect = 1e-15 Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 15/103 (14%) Frame = -1
Query: 493 CPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPLTLDNWNVEL-- 320 C NL++LE+R C F+ERALA ++ M SL YVW QGYK++ TGRDL+ + WN+E Sbjct: 494 CVNLRKLELRSCCFSERALALAILSMPSLRYVWVQGYKASQTGRDLMLMARPFWNIEFTP 553
Query: 319 --------IDEPGAP-----TQFVAYRCLSGKRTDAPAMVTVL 230 + E G P Q +AY L+GKR D P V L Sbjct: 554 PSSQNAGRLIEDGEPCVDSHAQILAYGSLAGKRLDCPQSVVTL 596
>tr|Q5VJQ1|Q5VJQ1_TOBAC Coronatine-insensitive 1 (Fragment) OS=Nicotiana tabacum GN=COI1 PE=2 SV=1 Length = 352
Score = 84.7 bits (208), Expect = 3e-15 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 15/114 (13%) Frame = -1
Query: 526 STKGSRSLRTVCPNLKRLEIRDCVFTERALASSVFGMKSLNYVWAQGYKSTGTGRDLLPL 347 S +G CP+L++LE+R C F+ERALA + +KSL Y+W QGY+++ TGRDLL + Sbjct: 231 SDEGLLEFSKGCPSLQKLEVRGCCFSERALALAAMQLKSLRYLWVQGYRASSTGRDLLAM 290
Query: 346 TLDNWNVELIDEPGA---------------PTQFVAYRCLSGKRTDAPAMVTVL 230 WN+ELI P +AY L+G+RTD P V L Sbjct: 291 ARPFWNIELIPARRVVASEGNNGEIIVAEHPAHILAYYSLAGQRTDFPDTVRPL 344
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