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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921375
Clone id YMU001_000149_B03
Library
Length 594
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCATGGTGGACATACCTCTGGAGCAAATTGCCATAATGTGGCAGCACTGGTGTCAACTGA
TGACATTCGACCAGGCCTTATCTTGCCCACATGCTTAGAGGCAATGGCTATGGCAAATCA
TCATAAGTTTGCCATCCATAGGACAGAACTCCATGCCTAATCCTGATCAGGCCCTTTTAA
TAATCCTAGATGTCTTTCCCACACTTATCACCAATTCACAGAGTTGAAAGGTAAGCCCCA
AAAAGAAGCATGCCGTGAGGCTACGTAGTTACGAGGAAGGGCTCGAAGATTGTTGGCTCT
TCAAATCACTTTGCTGATGGTCCAAACGACCAGCCACACCAGAACATCAACAAAACCATA
TTGGCCATTTGTTTGAATGTTCACATAATAAAACCACCAACAAAATCTGCACTAGTGCTT
GTGAGAGGCCTTTTCTTCATGAAGAGCCGGCTGTGCAAGGTCATTTCGTGTCCCCCTAAC
GTCTACGCCCTTTGCCATCTCCTTCCACTTGTATGTCCCCTCAACAAATGTAGTCCACAT
TATCTCCTTTTTATTCAACACATATAAATCTACTTCGTCTCCTTCTTCTGGTGT
■■Homology search results ■■ -
sp_hit_id P57999
Definition sp|P57999|ZAN_RABIT Zonadhesin (Fragment) OS=Oryctolagus cuniculus
Align length 69
Score (bit) 32.0
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921375|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B03.
         (594 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P57999|ZAN_RABIT Zonadhesin (Fragment) OS=Oryctolagus cunicul...    32   2.4  
sp|Q8DMA8|PPK_THEEB Polyphosphate kinase OS=Thermosynechococcus ...    32   3.2  
sp|Q7V9M5|MUTS_PROMA DNA mismatch repair protein mutS OS=Prochlo...    31   5.3  
sp|B1IQ91|MDTK_ECOLC Multidrug resistance protein mdtK OS=Escher...    31   5.4  
sp|A8A0L0|MDTK_ECOHS Multidrug resistance protein mdtK OS=Escher...    31   5.4  
sp|Q3Z218|MDTK_SHISS Multidrug resistance protein mdtK OS=Shigel...    30   9.2  
sp|Q32FA7|MDTK_SHIDS Multidrug resistance protein mdtK OS=Shigel...    30   9.2  
sp|Q321C2|MDTK_SHIBS Multidrug resistance protein mdtK OS=Shigel...    30   9.2  
sp|Q8ZPP2|MDTK_SALTY Multidrug resistance protein mdtK OS=Salmon...    30   9.2  
sp|Q8Z6N7|MDTK_SALTI Multidrug resistance protein mdtK OS=Salmon...    30   9.2  
sp|A9N0Y8|MDTK_SALPB Multidrug resistance protein mdtK OS=Salmon...    30   9.2  
sp|Q5PH16|MDTK_SALPA Multidrug resistance protein mdtK OS=Salmon...    30   9.2  
sp|Q57PL1|MDTK_SALCH Multidrug resistance protein mdtK OS=Salmon...    30   9.2  
sp|Q1RBD2|MDTK_ECOUT Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|P37340|MDTK_ECOLI Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|Q8FH68|MDTK_ECOL6 Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|Q0THG4|MDTK_ECOL5 Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|A1ABK4|MDTK_ECOK1 Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|P58164|MDTK_ECO57 Multidrug resistance protein mdtK OS=Escher...    30   9.2  
sp|A7ZMC9|MDTK_ECO24 Multidrug resistance protein mdtK OS=Escher...    30   9.2  

>sp|P57999|ZAN_RABIT Zonadhesin (Fragment) OS=Oryctolagus cuniculus
           GN=ZAN PE=2 SV=2
          Length = 2282

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 19/69 (27%)
 Frame = +1

Query: 391 KPPTKSALVLVRGLFFMKSRLCKVISCP----------------PNVYALCHLLP---LV 513
           KPP +   V   GL F  +   K  SCP                PN   LCH  P   + 
Sbjct: 524 KPPCQPGCVCDPGLVFSNNSCIKASSCPCLYNNNNYEPEAEWFSPNCTELCHCWPGGRIE 583

Query: 514 CPLNKCSPH 540
           C +++C  H
Sbjct: 584 CQISQCKTH 592


>sp|Q8DMA8|PPK_THEEB Polyphosphate kinase OS=Thermosynechococcus
           elongatus (strain BP-1) GN=ppk PE=3 SV=2
          Length = 732

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -1

Query: 594 TPEEGDEVDLYVLNKKEIM-------WTTFVEGTYKWKEMAKGVDVRGTRNDLAQPALHE 436
           TP E   + L +  + EIM       W    +GTY+ ++ A G   RGT + L    L +
Sbjct: 668 TPIEDPAIQLELKERLEIMLADNRQAWELQPDGTYRQRQPAPGEAERGTHSVLMARTLKD 727

Query: 435 EKASH 421
            + SH
Sbjct: 728 VQGSH 732


>sp|Q7V9M5|MUTS_PROMA DNA mismatch repair protein mutS
           OS=Prochlorococcus marinus GN=mutS PE=3 SV=1
          Length = 914

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 89  WAR*GLVECHQLTPVLPHYGNLLQRY 12
           W+   LVE ++LTPVL HY  L Q++
Sbjct: 78  WSHHSLVEINELTPVLRHYVELKQKH 103


>sp|B1IQ91|MDTK_ECOLC Multidrug resistance protein mdtK
           OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
           Crooks) GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VL+ LV+W    +I    N+  AL    V    A  WG P
Sbjct: 96  GFVSVLIMLVLWNAGYIIRSMENIDPALAEKAVGYLRALLWGAP 139


>sp|A8A0L0|MDTK_ECOHS Multidrug resistance protein mdtK
           OS=Escherichia coli O9:H4 (strain HS) GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VL+ LV+W    +I    N+  AL    V    A  WG P
Sbjct: 96  GFVSVLIMLVLWNAGYIIRSMENIDPALAEKAVGYLRALLWGAP 139


>sp|Q3Z218|MDTK_SHISS Multidrug resistance protein mdtK OS=Shigella
           sonnei (strain Ss046) GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VL+ LV+W    +I    N+  AL    V    A  WG P
Sbjct: 96  GFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAP 139


>sp|Q32FA7|MDTK_SHIDS Multidrug resistance protein mdtK OS=Shigella
           dysenteriae serotype 1 (strain Sd197) GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VL+ LV+W    +I    N+  AL    V    A  WG P
Sbjct: 96  GFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAP 139


>sp|Q321C2|MDTK_SHIBS Multidrug resistance protein mdtK OS=Shigella
           boydii serotype 4 (strain Sb227) GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VL+ LV+W    +I    N+  AL    V    A  WG P
Sbjct: 96  GFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAP 139


>sp|Q8ZPP2|MDTK_SALTY Multidrug resistance protein mdtK
           OS=Salmonella typhimurium GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VLV +V+W    +I   +N+  AL    V    A  WG P
Sbjct: 96  GFVSVLVMIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAP 139


>sp|Q8Z6N7|MDTK_SALTI Multidrug resistance protein mdtK
           OS=Salmonella typhi GN=mdtK PE=3 SV=1
          Length = 457

 Score = 30.0 bits (66), Expect = 9.2
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 357 GFVDVLVWLVVWTISKVI*RANNL-RALPRNYVASRHASFWGLP 229
           GFV VLV +V+W    +I   +N+  AL    V    A  WG P
Sbjct: 96  GFVSVLVMIVLWNAGYIIRSMHNIDPALADKAVGYLRALLWGAP 139
tr_hit_id Q5K6X2
Definition tr|Q5K6X2|Q5K6X2_CRYNE Phospholipid-translocating ATPase, putative (Putative uncharacterized protein) OS=Cryptococcus neoformans
Align length 64
Score (bit) 35.0
E-value 3.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921375|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B03.
         (594 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5K6X2|Q5K6X2_CRYNE Phospholipid-translocating ATPase, putati...    35   3.3  
tr|A7ECH9|A7ECH9_SCLS1 Predicted protein OS=Sclerotinia scleroti...    34   7.3  

>tr|Q5K6X2|Q5K6X2_CRYNE Phospholipid-translocating ATPase, putative
            (Putative uncharacterized protein) OS=Cryptococcus
            neoformans GN=CNBN1860 PE=4 SV=1
          Length = 1564

 Score = 35.0 bits (79), Expect = 3.3
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
 Frame = -1

Query: 399  WWFYYVNIQTNGQYGFVDVLVWLVVWTISKVI*RA--------NNLRALPRNYVASRHAS 244
            W+  Y    T   + +V +L W V WT+  VI             L ALP  Y ASR   
Sbjct: 1087 WFMIYCGWSTTYVFAYVYLLFWNVFWTLVPVIAIGLFDRNIDDETLMALPELYRASREGK 1146

Query: 243  FWGL 232
            ++GL
Sbjct: 1147 YFGL 1150


>tr|A7ECH9|A7ECH9_SCLS1 Predicted protein OS=Sclerotinia
           sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
           GN=SS1G_03018 PE=4 SV=1
          Length = 394

 Score = 33.9 bits (76), Expect = 7.3
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 519 GTYKWKEMAK--GVDVRGTRNDLAQPALHEEKASHK 418
           G Y WKE  K  G+D  G   DL  PAL++EKA H+
Sbjct: 292 GPYMWKEFVKKTGIDTFGF--DLEDPALYDEKAFHQ 325