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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921378
Clone id YMU001_000149_B07
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGGACAAACATGGCGAGGGCAGTAATTTGCAGCTTTCAGATACTCCCAATAAGGGGCAC
AAATGGGTAAGCTATCTGTTTTATTACAATGGAATTTGGAGGATCTGCCCTCGAATGAAG
AGAGGTTGCGCAATTGTCGTGTGTGTGCTCTCTTCCAGCACAACCGAAATCCTTTTGTGG
ACCACCCTGAATTTGCTTCACAAATTTGGGGTGCAAGGTACGCTACACACTGAAAATATG
CATCAGGTCTGATACTATGTATATGCAACCAGGGCTGACGCTATATTTTCAGAAATCCTG
CTCTTAATGTTGTAGTTTGAGGCTTATTAAAATTTTAAATTTGGTGGCGAAACCTTCTCA
AAAGGAAGTTTCTACCCTTTGCAATCATTTTTCTGCACCCCAAAGGAAGGGAAAAGTGTT
TTCTTTGATAAAGCTGAATTTTGAGTGAAGCATAGTTAAACAAACACATGCAGAACATTG
AAAAAGACAATGATGCCTCGTATTTTCAAACATCTGTAATTATGGTACGTTATTGAGATG
TAACACTATTGTTATGTGT
■■Homology search results ■■ -
sp_hit_id Q03091
Definition sp|Q03091|BSN1_BACAM Extracellular ribonuclease OS=Bacillus amyloliquefaciens
Align length 49
Score (bit) 65.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921378|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B07.
         (559 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03091|BSN1_BACAM Extracellular ribonuclease OS=Bacillus amyl...    66   1e-10
sp|O32150|BSN2_BACSU Extracellular ribonuclease OS=Bacillus subt...    64   7e-10
sp|A6QR56|A16A1_BOVIN Aldehyde dehydrogenase family 16 member A1...    34   0.43 
sp|Q3T1L0|A16A1_RAT Aldehyde dehydrogenase family 16 member A1 O...    32   2.1  
sp|Q571I9|A16A1_MOUSE Aldehyde dehydrogenase family 16 member A1...    31   4.7  
sp|Q8IZ83|A16A1_HUMAN Aldehyde dehydrogenase family 16 member A1...    31   4.7  
sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C0...    30   6.2  
sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=...    30   6.2  

>sp|Q03091|BSN1_BACAM Extracellular ribonuclease OS=Bacillus
           amyloliquefaciens GN=bsn PE=1 SV=1
          Length = 289

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 28/49 (57%), Positives = 38/49 (77%)
 Frame = +3

Query: 63  MGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           MGKLSVLL+WN +D   ++E+ RN  +   +QHNRNPF+DHPE+A +IW
Sbjct: 241 MGKLSVLLKWNKQDPVDSKEKRRNEIIYEDYQHNRNPFIDHPEWADEIW 289


>sp|O32150|BSN2_BACSU Extracellular ribonuclease OS=Bacillus
           subtilis GN=bsn PE=3 SV=1
          Length = 288

 Score = 63.5 bits (153), Expect = 7e-10
 Identities = 27/48 (56%), Positives = 35/48 (72%)
 Frame = +3

Query: 66  GKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           GK SVLL+WN +D   + ER RN  +   +QHNRNPF+DHPE+A +IW
Sbjct: 240 GKQSVLLEWNKQDPVDDRERKRNEIIYEKYQHNRNPFIDHPEWADEIW 287


>sp|A6QR56|A16A1_BOVIN Aldehyde dehydrogenase family 16 member A1
           OS=Bos taurus GN=ALDH16A1 PE=2 SV=1
          Length = 800

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 94  IWRICPRMKRGCAIVVCVLSSSTTEILL 177
           +WRICP +  GC +VV V  +S T +LL
Sbjct: 183 MWRICPALAVGCTVVVLVPPASPTPLLL 210


>sp|Q3T1L0|A16A1_RAT Aldehyde dehydrogenase family 16 member A1
           OS=Rattus norvegicus GN=Aldh16a1 PE=2 SV=1
          Length = 802

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 94  IWRICPRMKRGCAIVVCVLSSSTTEILL 177
           +WR+CP +  GC +V  V  S  T +LL
Sbjct: 183 MWRVCPALAMGCTVVALVPPSFPTPLLL 210


>sp|Q571I9|A16A1_MOUSE Aldehyde dehydrogenase family 16 member A1
           OS=Mus musculus GN=Aldh16a1 PE=2 SV=2
          Length = 802

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 94  IWRICPRMKRGCAIVVCVLSSSTTEILL 177
           +WR+CP +  GC +V  V  +  T +LL
Sbjct: 183 MWRVCPALAMGCTVVALVPPAFPTPLLL 210


>sp|Q8IZ83|A16A1_HUMAN Aldehyde dehydrogenase family 16 member A1
           OS=Homo sapiens GN=ALDH16A1 PE=1 SV=1
          Length = 802

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 94  IWRICPRMKRGCAIVVCVLSSSTTEILL 177
           +WRICP +  GC +V  V  +S   +LL
Sbjct: 183 MWRICPALAVGCTVVALVPPASPAPLLL 210


>sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase
           C05D10.2 OS=Caenorhabditis elegans GN=C05D10.2 PE=2 SV=2
          Length = 470

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
 Frame = +2

Query: 329 KILNLVAKPSQKEVSTLCNHFSA------PQRKGKVFSLI 430
           +I+N +AKPS+ +++++ +H++A      PQR  K   LI
Sbjct: 232 RIMNTIAKPSRADIASIGSHYAASVLEKMPQRPRKPLDLI 271


>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo
            sapiens GN=TRIM66 PE=2 SV=3
          Length = 1214

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +2

Query: 239  CIRSDTMYMQPGLTLYFQKSCS*CCSLRLIKILNLVAKPSQKEVSTLCNHFSAPQRKGKV 418
            C     M   PGL++Y QK C     L L    N ++ P  + VS L  H+         
Sbjct: 1028 CYNQPGMRASPGLSMYDQKKCE---KLVLSLCCNNLSLPFHEPVSPLARHY--------- 1075

Query: 419  FSLIKLNFE*SIVKQ 463
            + +IK   + SI+++
Sbjct: 1076 YQIIKRPMDLSIIRR 1090
tr_hit_id Q0E1C5
Definition tr|Q0E1C5|Q0E1C5_ORYSJ Os02g0462300 protein OS=Oryza sativa subsp. japonica
Align length 51
Score (bit) 80.1
E-value 7.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921378|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B07.
         (559 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0E1C5|Q0E1C5_ORYSJ Os02g0462300 protein OS=Oryza sativa subs...    80   7e-14
tr|A3A6L5|A3A6L5_ORYSJ Putative uncharacterized protein OS=Oryza...    80   7e-14
tr|A2X4K7|A2X4K7_ORYSI Putative uncharacterized protein OS=Oryza...    80   7e-14
tr|Q6K4Y9|Q6K4Y9_ORYSJ Putative uncharacterized protein OSJNBa00...    80   1e-13
tr|A7Q6B1|A7Q6B1_VITVI Chromosome chr11 scaffold_56, whole genom...    79   1e-13
tr|A5C2K2|A5C2K2_VITVI Putative uncharacterized protein OS=Vitis...    79   2e-13
tr|A9SET5|A9SET5_PHYPA Predicted protein OS=Physcomitrella paten...    77   5e-13
tr|Q68V00|Q68V00_BACME Extracellular ribonuclease OS=Bacillus me...    67   8e-10
tr|B2UXX2|B2UXX2_CLOBA Extracellular ribonuclease OS=Clostridium...    66   1e-09
tr|B2TPP6|B2TPP6_CLOBB Extracellular ribonuclease OS=Clostridium...    66   1e-09
tr|B1VMX3|B1VMX3_STRGG Putative secreted ribonuclease OS=Strepto...    66   1e-09
tr|A7Z8G5|A7Z8G5_BACA2 Bsn OS=Bacillus amyloliquefaciens (strain...    66   1e-09
tr|B7IPI6|B7IPI6_BACCE Ribonuclease OS=Bacillus cereus G9842 GN=...    66   1e-09
tr|Q82CQ4|Q82CQ4_STRAW Putative secreted ribonuclease OS=Strepto...    65   3e-09
tr|Q81N47|Q81N47_BACAN Ribonuclease OS=Bacillus anthracis GN=BAS...    65   3e-09
tr|A9VLW3|A9VLW3_BACWK Endonuclease I OS=Bacillus weihenstephane...    65   3e-09
tr|A0RGB1|A0RGB1_BACAH Extracellular ribonuclease OS=Bacillus th...    65   3e-09
tr|Q4MXM4|Q4MXM4_BACCE Extracellular ribonuclease OS=Bacillus ce...    65   3e-09
tr|B7HC62|B7HC62_BACCE Ribonuclease OS=Bacillus cereus B4264 GN=...    65   3e-09
tr|B5ULN9|B5ULN9_BACCE Ribonuclease OS=Bacillus cereus AH1134 GN...    65   3e-09
tr|B3Z4I6|B3Z4I6_BACCE Ribonuclease OS=Bacillus cereus NVH0597-9...    65   3e-09
tr|B3IZR8|B3IZR8_BACAN Ribonuclease OS=Bacillus anthracis Tsiank...    65   3e-09
tr|B1UKS9|B1UKS9_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B1GCH3|B1GCH3_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B1ETV4|B1ETV4_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B0QDC4|B0QDC4_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B0PWU3|B0PWU3_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B0ALG6|B0ALG6_BACAN Ribonuclease OS=Bacillus anthracis str. A...    65   3e-09
tr|B5HFR2|B5HFR2_STRPR Secreted ribonuclease OS=Streptomyces pri...    64   5e-09
tr|Q65F95|Q65F95_BACLD Extracellular ribonuclease OS=Bacillus li...    64   7e-09

>tr|Q0E1C5|Q0E1C5_ORYSJ Os02g0462300 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0462300 PE=4 SV=1
          Length = 488

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 60  QMGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIWG 212
           +MG LS LL+WN  D PS  E+LRN RVC+L+QHNRNPFVDHPE+A+ IWG
Sbjct: 258 KMGLLSALLKWNELDPPSRSEQLRNNRVCSLYQHNRNPFVDHPEYANLIWG 308


>tr|A3A6L5|A3A6L5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006437 PE=4 SV=1
          Length = 374

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 60  QMGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIWG 212
           +MG LS LL+WN  D PS  E+LRN RVC+L+QHNRNPFVDHPE+A+ IWG
Sbjct: 144 KMGLLSALLKWNELDPPSRSEQLRNNRVCSLYQHNRNPFVDHPEYANLIWG 194


>tr|A2X4K7|A2X4K7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07127 PE=4 SV=1
          Length = 488

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +3

Query: 60  QMGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIWG 212
           +MG LS LL+WN  D PS  E+LRN RVC+L+QHNRNPFVDHPE+A+ IWG
Sbjct: 258 KMGLLSALLKWNELDPPSRSEQLRNNRVCSLYQHNRNPFVDHPEYANLIWG 308


>tr|Q6K4Y9|Q6K4Y9_ORYSJ Putative uncharacterized protein
           OSJNBa0035A24.5 (Putative uncharacterized protein
           P0644G05.38) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0035A24.5 PE=4 SV=1
          Length = 230

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 35/50 (70%), Positives = 41/50 (82%)
 Frame = +3

Query: 63  MGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIWG 212
           MG LS LL+WN  D PS  E+LRN RVC+L+QHNRNPFVDHPE+A+ IWG
Sbjct: 1   MGLLSALLKWNELDPPSRSEQLRNNRVCSLYQHNRNPFVDHPEYANLIWG 50


>tr|A7Q6B1|A7Q6B1_VITVI Chromosome chr11 scaffold_56, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031323001
           PE=4 SV=1
          Length = 296

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = +3

Query: 60  QMGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           +MG LS LL+WN  D PS EE+LRN R+C L+QHNRNPFVDHPE+A+ IW
Sbjct: 233 EMGLLSTLLEWNEIDPPSREEKLRNERICKLYQHNRNPFVDHPEYANLIW 282


>tr|A5C2K2|A5C2K2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_012634 PE=4 SV=1
          Length = 339

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 34/50 (68%), Positives = 40/50 (80%)
 Frame = +3

Query: 60  QMGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           +MG LS LL+WN  D PS EE+LRN R+C L+QHNRNPFVDHPE+A  IW
Sbjct: 276 EMGLLSTLLEWNEIDPPSREEKLRNERICKLYQHNRNPFVDHPEYABLIW 325


>tr|A9SET5|A9SET5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_233092 PE=4 SV=1
          Length = 248

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = +3

Query: 63  MGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIWGAR 218
           MG LS LL+WN  D PS  E LRN RVC+L+Q NRNPFVDHPE+AS IW AR
Sbjct: 1   MGLLSTLLEWNNLDPPSPSEVLRNSRVCSLYQGNRNPFVDHPEYASSIWDAR 52


>tr|Q68V00|Q68V00_BACME Extracellular ribonuclease OS=Bacillus
           megaterium GN=barM PE=3 SV=1
          Length = 382

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = +3

Query: 66  GKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           GKLSVLLQWN +D   + ER RN  + + +QHNRNPF+DHPE+ ++IW
Sbjct: 334 GKLSVLLQWNAQDPVDDRERRRNDIIYSDYQHNRNPFIDHPEWVNEIW 381


>tr|B2UXX2|B2UXX2_CLOBA Extracellular ribonuclease OS=Clostridium
           botulinum (strain Alaska E43 / type E3) GN=CLH_2762 PE=4
           SV=1
          Length = 428

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +3

Query: 63  MGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           MGKLS LLQWN +D     E+ RN  +   +QHNRNPF+DHPE+A+QIW
Sbjct: 379 MGKLSTLLQWNNQDPVDELEKRRNDIIYKKYQHNRNPFIDHPEWANQIW 427


>tr|B2TPP6|B2TPP6_CLOBB Extracellular ribonuclease OS=Clostridium
           botulinum (strain Eklund 17B / type B) GN=CLL_A3017 PE=4
           SV=1
          Length = 443

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 29/49 (59%), Positives = 36/49 (73%)
 Frame = +3

Query: 63  MGKLSVLLQWNLEDLPSNEERLRNCRVCALFQHNRNPFVDHPEFASQIW 209
           MGKLS LLQWN +D     E+ RN  +   +QHNRNPF+DHPE+A+QIW
Sbjct: 394 MGKLSTLLQWNNQDPVDEIEKKRNDIIYKKYQHNRNPFIDHPEWANQIW 442