BP921379
Clone id YMU001_000149_B08
Library
Length 407
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTCAAGGTGACTGGCATGGAAATTCGAAAACCGATCCCATCTGTGATGGACCACATG
AGACTTAGAATAGCAGCTTAAATACTGCCCTTTCAACTCGAAAGCTGTCCTCTCTGGACC
ATTCCCAAGCATTTGCAAGTTCTCATTCGTCACAGATATGCTTTTATCACATCAGCCACC
TTTGCAGATCTTTTTAGCTGCTGACTGACGACCCTTGCTTGTGGTGGCAGGTCCTCGTTT
CAAACGCCTCAAAACAGGGGGCTTCACCAGCTTGCTTTTCATGTTATCATCACTTGCATC
GCTCAATTCTTTTGTGCTCAATGTGGAATTGCCAGCTGTTGTAGAATGCTCCATGTCTTC
CTTCTCTTGAAGGCAAGGGCCAACCCCTGCGTAAGTCCTTGTTGCAC
■■Homology search results ■■ -
sp_hit_id Q296J6
Definition sp|Q296J6|RRP15_DROPS RRP15-like protein OS=Drosophila pseudoobscura pseudoobscura
Align length 58
Score (bit) 33.1
E-value 0.44
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921379|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B08.
(407 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q296J6|RRP15_DROPS RRP15-like protein OS=Drosophila pseudoobs... 33 0.44
sp|Q75BK1|DCP2_ASHGO mRNA-decapping enzyme subunit 2 OS=Ashbya g... 30 2.8
sp|P78586|ARG56_CANAL Protein ARG5,6, mitochondrial OS=Candida a... 30 2.8
sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin ho... 29 6.3
sp|B4F769|SMAL1_RAT SWI/SNF-related matrix-associated actin-depe... 29 8.2

>sp|Q296J6|RRP15_DROPS RRP15-like protein OS=Drosophila
pseudoobscura pseudoobscura GN=GA17706 PE=3 SV=1
Length = 279

Score = 33.1 bits (74), Expect = 0.44
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3

Query: 363 KEDMEHSTTAGNSTLSTKELSDASDDNMKSKLVKPPVLRRLKRGPATTSKGRQSAAKK 190
+ D E S T + +D +KSK V P VL R K+ PA AAKK
Sbjct: 23 ESDSEDSQNVDGDTGANAGWADCIGKVLKSKSVGPTVLSRAKKNPAVVRSKTSEAAKK 80


>sp|Q75BK1|DCP2_ASHGO mRNA-decapping enzyme subunit 2 OS=Ashbya
gossypii GN=DCP2 PE=3 SV=1
Length = 880

Score = 30.4 bits (67), Expect = 2.8
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = -3

Query: 360 EDMEHSTTAGNSTLSTKELSDASDDNMKSKLVKPPVLRRLKRG----PATTSKGRQSAAK 193
+++ H T+GN LST+ L S+ KSK P ++ LKRG P T S Q+A
Sbjct: 564 DNISHVDTSGN--LSTRSLQ--SEKTEKSKPTAKPKIKLLKRGETLTPLTPSISSQTATS 619

Query: 192 KICKGG 175
+ G
Sbjct: 620 ESSAAG 625


>sp|P78586|ARG56_CANAL Protein ARG5,6, mitochondrial OS=Candida
albicans GN=ARG5,6 PE=3 SV=1
Length = 857

Score = 30.4 bits (67), Expect = 2.8
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = -3

Query: 345 STTAGNSTLSTKELSDASDDNMKSKLVKPPVLRRLKRGPATTSKGRQSAAKKICKGG*CD 166
S++ G+S S+KE + K V R P S+G+Q+ KK+ G
Sbjct: 485 SSSIGSSLSSSKESGVFTSAQQKRGFHHSTVRRNTNPNPPL-SEGKQTERKKVALIG--- 540

Query: 165 KSISVTNENL-QMLGNGPER-----TAFELKGQYLSCYSKSHVVH 49
+ T +NL +++ N P ++ EL+GQ L Y+K ++V+
Sbjct: 541 -ARGYTGQNLIKLIDNHPYLDISYVSSRELEGQKLQGYNKDNIVY 584


>sp|Q8VDP3|MICA1_MOUSE NEDD9-interacting protein with calponin
homology and LIM domains OS=Mus musculus GN=Mical1 PE=1
SV=1
Length = 1048

Score = 29.3 bits (64), Expect = 6.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3

Query: 375 CLQEKEDMEHSTTAGNSTLSTKELSDASDDNMKSKLVKPPVLR 247
CLQ + N +L ++EL D NM+ PPV R
Sbjct: 733 CLQHLPQEDQKEADNNGSLESQELPTPGDSNMQPDPSSPPVTR 775


>sp|B4F769|SMAL1_RAT SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A-like
protein 1 OS=Rattus norvegicus GN=Smarcal1 PE=2 SV=1
Length = 910

Score = 28.9 bits (63), Expect = 8.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3

Query: 372 LQEKEDMEHSTTAGNSTLSTKELSDASDDNMKSKLVKPPVLRRLK 238
L+ E E +T+G S S++EL D +D+N + PP RR +
Sbjct: 856 LEAAESFELGSTSGTSGNSSQELGDITDENALAD--SPPKKRRFE 898


tr_hit_id A4Y5G4
Definition tr|A4Y5G4|A4Y5G4_SHEPC Catalase domain protein OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453)
Align length 72
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921379|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_B08.
(407 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4Y5G4|A4Y5G4_SHEPC Catalase domain protein OS=Shewanella put... 35 1.4
tr|A1RLA7|A1RLA7_SHESW Catalase domain protein OS=Shewanella sp.... 35 1.4
tr|A2V0Y1|A2V0Y1_SHEPU Catalase-like OS=Shewanella putrefaciens ... 35 1.4
tr|Q0D1V3|Q0D1V3_ASPTN Putative uncharacterized protein OS=Asper... 34 3.2
tr|A8IXH7|A8IXH7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 34 4.2
tr|Q16T62|Q16T62_AEDAE Aldehyde oxidase OS=Aedes aegypti GN=AAEL... 33 5.5
tr|B6Q373|B6Q373_PENMA Putative uncharacterized protein OS=Penic... 33 5.5
tr|Q8ISF7|Q8ISF7_CAEEL 2MDa_1 protein OS=Caenorhabditis elegans ... 33 7.2
tr|Q8ISF6|Q8ISF6_CAEEL 2MDa_2 protein OS=Caenorhabditis elegans ... 33 7.2
tr|Q8ISF5|Q8ISF5_CAEEL 1MDa_1 protein OS=Caenorhabditis elegans ... 33 7.2
tr|B4GF22|B4GF22_DROPE GL22125 OS=Drosophila persimilis GN=GL221... 33 7.2

>tr|A4Y5G4|A4Y5G4_SHEPC Catalase domain protein OS=Shewanella
putrefaciens (strain CN-32 / ATCC BAA-453)
GN=Sputcn32_1472 PE=3 SV=1
Length = 335

Score = 35.4 bits (80), Expect = 1.4
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = -3

Query: 405 ATRTYAGVGPCL--QEKEDMEHSTT----------AGNSTLSTKELSDASDDNMKSKLVK 262
A Y GV L +K +HS T AG + LS KELSD SDD +K++L
Sbjct: 183 ANSRYFGVNSFLFTTQKGGAQHSETVAGKWIFEPVAGTAALSAKELSDLSDDFLKAEL-- 240

Query: 261 PPVLRRLKRGPA 226
L R+K PA
Sbjct: 241 ---LERIKTQPA 249


>tr|A1RLA7|A1RLA7_SHESW Catalase domain protein OS=Shewanella sp.
(strain W3-18-1) GN=Sputw3181_2629 PE=3 SV=1
Length = 335

Score = 35.4 bits (80), Expect = 1.4
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = -3

Query: 405 ATRTYAGVGPCL--QEKEDMEHSTT----------AGNSTLSTKELSDASDDNMKSKLVK 262
A Y GV L +K +HS T AG + LS KELSD SDD +K++L
Sbjct: 183 ANSRYFGVNSFLFTTQKGGAQHSETVAGKWIFEPVAGTAALSAKELSDLSDDFLKAEL-- 240

Query: 261 PPVLRRLKRGPA 226
L R+K PA
Sbjct: 241 ---LERIKTQPA 249


>tr|A2V0Y1|A2V0Y1_SHEPU Catalase-like OS=Shewanella putrefaciens 200
GN=Sput200DRAFT_0544 PE=3 SV=1
Length = 335

Score = 35.4 bits (80), Expect = 1.4
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = -3

Query: 405 ATRTYAGVGPCL--QEKEDMEHSTT----------AGNSTLSTKELSDASDDNMKSKLVK 262
A Y GV L +K +HS T AG + LS KELSD SDD +K++L
Sbjct: 183 ANSRYFGVNSFLFTTQKGGAQHSETVAGKWIFEPVAGTAALSAKELSDLSDDFLKAEL-- 240

Query: 261 PPVLRRLKRGPA 226
L R+K PA
Sbjct: 241 ---LERIKTQPA 249


>tr|Q0D1V3|Q0D1V3_ASPTN Putative uncharacterized protein
OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_00081
PE=4 SV=1
Length = 590

Score = 34.3 bits (77), Expect = 3.2
Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Frame = -3

Query: 366 EKEDMEHSTTAGNSTLSTKELSDASDDN----------MKSKLVKPPVLRRLKRGPATTS 217
E DME + TA S S K DA DD+ K KL P K+ PA S
Sbjct: 299 EDVDMEDADTAKKSKSSKKRKKDAEDDDEKPAKTPKTGTKLKLTTPKTPASEKKTPA--S 356

Query: 216 KGRQSAA-KKICKGG*CDK 163
K +QSA+ KK KG D+
Sbjct: 357 KAKQSASTKKSSKGATSDE 375


>tr|A8IXH7|A8IXH7_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_172839 PE=4
SV=1
Length = 5234

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +3

Query: 246 ASKQGASPACFSCYHHLHRSILLCSMWNCQLL*NAPCLPSLEGKGQPLRKSLL 404
AS+ A P + L + +LLC++W QL+ P LP + G P R++ L
Sbjct: 609 ASRAAAPPPVTALRQLLEKHLLLCAVWGLQLV--QPLLPPVTAAGMPPREAWL 659


>tr|Q16T62|Q16T62_AEDAE Aldehyde oxidase OS=Aedes aegypti
GN=AAEL010367 PE=4 SV=1
Length = 1266

Score = 33.5 bits (75), Expect = 5.5
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1

Query: 196 SC*LTTLACGGRSSFQTPQNRGLHQLAFHVIITCIAQFFCAQCGIASCCRMLHVFLLLKA 375
SC L +C G T + G ++ +H + +AQF +QCG S ++ +F LLKA
Sbjct: 71 SCLLPVYSCHGLDIL-TVEGIGNKKIGYHPVQKRLAQFNGSQCGYCSSGMVMSMFSLLKA 129


>tr|B6Q373|B6Q373_PENMA Putative uncharacterized protein
OS=Penicillium marneffei ATCC 18224 GN=PMAA_028570 PE=4
SV=1
Length = 332

Score = 33.5 bits (75), Expect = 5.5
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -3

Query: 351 EHSTTAGNSTLSTKELSDASDDNMKSKLVKPPVLRRLKRGPATTSKGRQSAAKK 190
EH TT+ +EL D S+ + S +++P ++R++RG S AA K
Sbjct: 41 EHRTTSEERQNDNRELQDTSNQSEVSNIMRPRKVQRMRRGGIEFSTTSSQAADK 94


>tr|Q8ISF7|Q8ISF7_CAEEL 2MDa_1 protein OS=Caenorhabditis elegans
GN=isof PE=2 SV=1
Length = 18534

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = -3

Query: 366 EKEDMEHSTTAGNSTLS------TKELSDA--SDDNMKSKLVKPPVLRRLKRGPATTSKG 211
EK+ M+ T +S++S TK+L+ S+ + + V +KR TTSK
Sbjct: 9200 EKKIMKKKTEKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKS 9259

Query: 210 RQSAAKKICKGG*CDKSISVTNE 142
+Q+ + GG D SIS T++
Sbjct: 9260 KQTTEEHPQPGGKSDSSISSTSD 9282


>tr|Q8ISF6|Q8ISF6_CAEEL 2MDa_2 protein OS=Caenorhabditis elegans
GN=isof PE=2 SV=1
Length = 18519

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = -3

Query: 366 EKEDMEHSTTAGNSTLS------TKELSDA--SDDNMKSKLVKPPVLRRLKRGPATTSKG 211
EK+ M+ T +S++S TK+L+ S+ + + V +KR TTSK
Sbjct: 9200 EKKIMKKKTEKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKS 9259

Query: 210 RQSAAKKICKGG*CDKSISVTNE 142
+Q+ + GG D SIS T++
Sbjct: 9260 KQTTEEHPQPGGKSDSSISSTSD 9282


>tr|Q8ISF5|Q8ISF5_CAEEL 1MDa_1 protein OS=Caenorhabditis elegans
GN=isof PE=2 SV=1
Length = 10578

Score = 33.1 bits (74), Expect = 7.2
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = -3

Query: 366 EKEDMEHSTTAGNSTLS------TKELSDA--SDDNMKSKLVKPPVLRRLKRGPATTSKG 211
EK+ M+ T +S++S TK+L+ S+ + + V +KR TTSK
Sbjct: 9180 EKKIMKKKTEKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTSKS 9239

Query: 210 RQSAAKKICKGG*CDKSISVTNE 142
+Q+ + GG D SIS T++
Sbjct: 9240 KQTTEEHPQPGGKSDSSISSTSD 9262