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NBDC - LSDB Archive
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BP921390
Clone id YMU001_000149_C09
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATTACCATCTATGCGTTCATAGCTCCATTTCTTCATCGTCAGCCAATCCTCAATAATATC
TAACATAATCTTGAACTGAGAGTATATTAATACTCGATGGCCTTGTTCTTTCAATTTCAC
CATCATTTTATCCATGAGGACAAGCTTTCCAGAGGCCTCTAAGAGCTGCCTATAAGTGTC
TTTGGATCTTTTCATCTCTTCTTCGACTCCTGGGAGTAAATATGGATGTCCACAAAGCTT
GCGAAGCTCCATGACCACATTGTTAAGAGATATCTGTGGCCCTCCCTTTCGAGACAAAAG
CTGATAATTTCGTGTGAGTATGGCCTTGTAGTATTCCTTTTGTAATGAACTGAGCTCCAC
TCTCAATATAAGCTCTTTCTTTGGAGGTAAGTCCTTCATGACATCTTTCTTCACCCTTCT
TAGAAGATGAGGTGCCAGCATCTTATGTAGTCGTCCAACTTGCTCTTCTTGATTGAGGTC
TTTAAACTCCTCTTGAAAATCCTCTAGATTCGCAAACTTGCCAGCATCGAGGAAA
■■Homology search results ■■ -
sp_hit_id Q9S775
Definition sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana
Align length 177
Score (bit) 282.0
E-value 8.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921390|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_C09.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE...   282   8e-76
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3...   193   4e-49
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M...   189   7e-48
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4...   189   7e-48
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4...   189   7e-48
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5...   187   2e-47
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3...   186   6e-47
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3...   179   1e-44
sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7...   174   3e-43
sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7...   171   2e-42
sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7...   171   2e-42
sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9...   166   5e-41
sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9...   166   5e-41
sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6...   161   2e-39
sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2...   161   2e-39
sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8...   160   4e-39
sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosacchar...   159   6e-39
sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1...   158   1e-38
sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1...   158   1e-38
sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar...   155   9e-38
sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Sacch...   154   3e-37
sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPas...   153   4e-37
sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPas...   151   2e-36
sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein ...   147   4e-35
sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein ...   144   4e-34
sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein ...   141   2e-33
sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein ...   141   2e-33
sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-de...   140   3e-33
sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-de...   140   3e-33
sp|P28370|SMCA1_HUMAN Probable global transcription activator SN...   140   5e-33

>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE
           OS=Arabidopsis thaliana GN=PKL PE=1 SV=1
          Length = 1384

 Score =  282 bits (721), Expect = 8e-76
 Identities = 134/177 (75%), Positives = 159/177 (89%)
 Frame = -2

Query: 534 FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
           FLDAGKF +LE+FQEEFKD+NQEEQ+ RLHKMLAPHLLRRVKKDVMKD+PPKKELILRV+
Sbjct: 467 FLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVD 526

Query: 354 LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
           LSSLQKEYYKAI TRNYQ+L++KGG QISLNN++MELRK+C HPY+L GVE  +  + + 
Sbjct: 527 LSSLQKEYYKAIFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEA 586

Query: 174 YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
           ++QLLE+ GKL L+DKMMVKLKEQGHRVLIY+QF+ MLD++ED+ T KKW YERIDG
Sbjct: 587 FKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDG 643


>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3
            OS=Homo sapiens GN=CHD3 PE=1 SV=3
          Length = 2000

 Score =  193 bits (491), Expect = 4e-49
 Identities = 99/181 (54%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F NLE F EEF D+++E+Q+ +LH +L PH+LRR+K DV K++P K ELI+RVE
Sbjct: 928  FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE 987

Query: 354  LSSLQKEYYKAILTRNYQLL-SRKGGPQISLNNVVMELRKLCGHPYLLP-GVEEEMKRSK 181
            LS +QK+YYK ILTRN++ L SR GG Q+SL N++M+L+K C HPYL P    E  K   
Sbjct: 988  LSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPS 1047

Query: 180  DTYR--QLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
              Y    L+++SGKL+L+ KM+ KLKEQGHRVLI+SQ   MLD++ED+L  + + YERID
Sbjct: 1048 GAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERID 1107

Query: 6    G 4
            G
Sbjct: 1108 G 1108


>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2
            homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
          Length = 1982

 Score =  189 bits (480), Expect = 7e-48
 Identities = 96/181 (53%), Positives = 131/181 (72%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   KF +L+ FQ EF D+++EEQV RLH+ML PH+LRR+K DV+K++P K E I+RVE
Sbjct: 920  FLSRDKFNDLQAFQGEFADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVE 979

Query: 354  LSSLQKEYYKAILTRNYQLL-SRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKD 178
            LS++QK++YK ILT+NY+ L S+ GG   SL N++M+L+K C HPYL P   EE   +  
Sbjct: 980  LSAMQKKFYKFILTKNYEALNSKSGGGSCSLINIMMDLKKCCNHPYLFPSAAEEATTAAG 1039

Query: 177  ---TYRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
                   L +A+GKLVL+ KM+ +LK Q HRVLI+SQ   MLDI+ED+L  +++ YERID
Sbjct: 1040 GLYEINSLTKAAGKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERID 1099

Query: 6    G 4
            G
Sbjct: 1100 G 1100


>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
            OS=Mus musculus GN=Chd4 PE=1 SV=1
          Length = 1915

 Score =  189 bits (480), Expect = 7e-48
 Identities = 100/181 (55%), Positives = 129/181 (71%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F NLE F EEF D+ +E+Q+ +LH ML PH+LRR+K DV K++P K ELI+RVE
Sbjct: 911  FLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVE 970

Query: 354  LSSLQKEYYKAILTRNYQLL-SRKGGPQISLNNVVMELRKLCGHPYLLP-GVEEEMKRSK 181
            LS +QK+YYK ILTRN++ L +R GG Q+SL NVVM+L+K C HPYL P    E  K   
Sbjct: 971  LSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPN 1030

Query: 180  DTY--RQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
              Y    L+ ASGKL+L+ KM+  LKE GHRVLI+SQ   MLD++ED+L  + + YERID
Sbjct: 1031 GMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERID 1090

Query: 6    G 4
            G
Sbjct: 1091 G 1091


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
            OS=Homo sapiens GN=CHD4 PE=1 SV=1
          Length = 1912

 Score =  189 bits (480), Expect = 7e-48
 Identities = 100/181 (55%), Positives = 129/181 (71%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F NLE F EEF D+ +E+Q+ +LH ML PH+LRR+K DV K++P K ELI+RVE
Sbjct: 918  FLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVE 977

Query: 354  LSSLQKEYYKAILTRNYQLL-SRKGGPQISLNNVVMELRKLCGHPYLLP-GVEEEMKRSK 181
            LS +QK+YYK ILTRN++ L +R GG Q+SL NVVM+L+K C HPYL P    E  K   
Sbjct: 978  LSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPN 1037

Query: 180  DTY--RQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
              Y    L+ ASGKL+L+ KM+  LKE GHRVLI+SQ   MLD++ED+L  + + YERID
Sbjct: 1038 GMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERID 1097

Query: 6    G 4
            G
Sbjct: 1098 G 1098


>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5
            OS=Homo sapiens GN=CHD5 PE=2 SV=1
          Length = 1954

 Score =  187 bits (476), Expect = 2e-47
 Identities = 93/181 (51%), Positives = 132/181 (72%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F NLE F EEF D+++E+Q+ +LH +L PH+LRR+K DV K++P K ELI+RVE
Sbjct: 892  FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE 951

Query: 354  LSSLQKEYYKAILTRNYQLLSRK-GGPQISLNNVVMELRKLCGHPYLLPGVEEE---MKR 187
            LS +QK+YYK ILTRN++ L+ K GG Q+SL N++M+L+K C HPYL P    E   +  
Sbjct: 952  LSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPN 1011

Query: 186  SKDTYRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
                   L+++SGKL+L+ KM+ KL+++GHRVLI+SQ   MLD++ED+L  + + YERID
Sbjct: 1012 GSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERID 1071

Query: 6    G 4
            G
Sbjct: 1072 G 1072


>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3
           OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3
          Length = 892

 Score =  186 bits (472), Expect = 6e-47
 Identities = 93/182 (51%), Positives = 133/182 (73%), Gaps = 4/182 (2%)
 Frame = -2

Query: 534 FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
           FL +GKF +L+ FQ EF D+++EEQV RLH++L PH+LRR+K DV+K +PPK E I+RVE
Sbjct: 454 FLSSGKFNDLQTFQAEFTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVE 513

Query: 354 LSSLQKEYYKAILTRNYQLLSRKGGPQI-SLNNVVMELRKLCGHPYLLPGVEEEMKRSKD 178
           LSS+QK++YK ILT+N++ L++KGG ++ SL N++M+LRK C HPYL P   EE   S  
Sbjct: 514 LSSMQKKFYKHILTKNFKALNQKGGGRVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPS 573

Query: 177 ---TYRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
                  L +ASGKL L+ KM+ +LK   HRVL++SQ   ML+++E +L  + + Y+RID
Sbjct: 574 GLYEMSSLTKASGKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRID 633

Query: 6   GN 1
           G+
Sbjct: 634 GS 635


>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3
            homolog OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
          Length = 1787

 Score =  179 bits (453), Expect = 1e-44
 Identities = 90/182 (49%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F  LE F  EF ++++E+Q+ +LH +L PH+LRR+K DV+  +P K+ELI+RVE
Sbjct: 808  FLAPDRFNQLESFTAEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVE 867

Query: 354  LSSLQKEYYKAILTRNYQLLS-RKGGPQISLNNVVMELRKLCGHPYL-LPGVEEEMKRSK 181
            LS++QK+YYK ILTRN+  L+ + GG Q+SL N++MEL+K C HPYL +    E  K   
Sbjct: 868  LSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKN 927

Query: 180  DTYR--QLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
              Y    L++ +GK VL+ KM+ KLK+ GHRVLI+SQ  +MLDI+ED+  ++ + YERID
Sbjct: 928  GMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERID 987

Query: 6    GN 1
            G+
Sbjct: 988  GS 989


>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7
            OS=Gallus gallus GN=CHD7 PE=2 SV=1
          Length = 3011

 Score =  174 bits (440), Expect = 3e-43
 Identities = 91/189 (48%), Positives = 133/189 (70%), Gaps = 12/189 (6%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL+ G+F +   F +EF DL  EEQV +L  +L P +LRR+K+DV K+L PK+E I+ VE
Sbjct: 1151 FLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVE 1210

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQ--ISLNNVVMELRKLCGHPYLLPGVEEE-MKRS 184
            L+++QK+YY+AIL +N+  LS+ GG     +L N +MELRK C HPYL+ G EE+ ++  
Sbjct: 1211 LTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEF 1270

Query: 183  KDTY---------RQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMK 31
            K+T+         + +++A+GKLVL+DK++ KLK  GHRVLI+SQ    LDI+ED+L  +
Sbjct: 1271 KETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQR 1330

Query: 30   KWSYERIDG 4
            ++ YERIDG
Sbjct: 1331 RYPYERIDG 1339


>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7
            OS=Mus musculus GN=Chd7 PE=2 SV=1
          Length = 2986

 Score =  171 bits (434), Expect = 2e-42
 Identities = 90/189 (47%), Positives = 132/189 (69%), Gaps = 12/189 (6%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL+  +F +   F +EF DL  EEQV +L  +L P +LRR+K+DV K+L PK+E I+ VE
Sbjct: 1140 FLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVE 1199

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQ--ISLNNVVMELRKLCGHPYLLPGVEEE-MKRS 184
            L+++QK+YY+AIL +N+  LS+ GG     +L N +MELRK C HPYL+ G EE+ ++  
Sbjct: 1200 LTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEKILEEF 1259

Query: 183  KDTY---------RQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMK 31
            K+T+         + +++A+GKLVL+DK++ KLK  GHRVLI+SQ    LDI+ED+L  +
Sbjct: 1260 KETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQR 1319

Query: 30   KWSYERIDG 4
            ++ YERIDG
Sbjct: 1320 RYPYERIDG 1328
tr_hit_id A9TI22
Definition tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment) OS=Physcomitrella patens subsp. patens
Align length 177
Score (bit) 287.0
E-value 3.0e-76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921390|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_C09.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragmen...   287   3e-76
tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragmen...   286   4e-76
tr|A7P5Y0|A7P5Y0_VITVI Chromosome chr4 scaffold_6, whole genome ...   285   8e-76
tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza...   239   5e-62
tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza...   239   5e-62
tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza...   239   5e-62
tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza ...   239   5e-62
tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza...   239   5e-62
tr|A5BRA9|A5BRA9_VITVI Putative uncharacterized protein OS=Vitis...   214   3e-54
tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3...   193   4e-48
tr|Q2KML0|Q2KML0_RAT Chromodomain helicase DNA-binding protein 3...   193   4e-48
tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3...   193   4e-48
tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3...   193   4e-48
tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein...   193   4e-48
tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein...   193   4e-48
tr|B4IXP0|B4IXP0_DROGR GH16907 OS=Drosophila grimshawi GN=GH1690...   193   5e-48
tr|B4LBL9|B4LBL9_DROVI GJ13998 OS=Drosophila virilis GN=GJ13998 ...   191   2e-47
tr|Q54Q16|Q54Q16_DICDI Chromo (CHRomatin Organization MOdifier) ...   191   3e-47
tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22...   191   3e-47
tr|B4ML97|B4ML97_DROWI GK17504 OS=Drosophila willistoni GN=GK175...   191   3e-47
tr|B4L0W7|B4L0W7_DROMO GI13663 OS=Drosophila mojavensis GN=GI136...   191   3e-47
tr|B3M8T6|B3M8T6_DROAN GF10842 OS=Drosophila ananassae GN=GF1084...   191   3e-47
tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom...   190   4e-47
tr|B3KRD4|B3KRD4_HUMAN cDNA FLJ34067 fis, clone FCBBF3001914, hi...   190   4e-47
tr|Q7PZN7|Q7PZN7_ANOGA AGAP012009-PA OS=Anopheles gambiae GN=AGA...   189   6e-47
tr|B5DQA0|B5DQA0_DROPS GA23929 OS=Drosophila pseudoobscura pseud...   189   6e-47
tr|B4H036|B4H036_DROPE GL22908 OS=Drosophila persimilis GN=GL229...   189   6e-47
tr|Q8BM83|Q8BM83_MOUSE Putative uncharacterized protein (Fragmen...   189   8e-47
tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus muscu...   189   8e-47
tr|Q3U582|Q3U582_MOUSE Putative uncharacterized protein (Fragmen...   189   8e-47

>tr|A9TI22|A9TI22_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
            OS=Physcomitrella patens subsp. patens GN=CHR1504 PE=4
            SV=1
          Length = 1245

 Score =  287 bits (734), Expect = 3e-76
 Identities = 137/177 (77%), Positives = 159/177 (89%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FLDAGKF +LE+FQ+EF+D+NQEEQVGRLHKMLAPHLLRRVKKDV+K++PPKKELILRVE
Sbjct: 490  FLDAGKFNSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVE 549

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
            LSSLQKE+YKAILT+NYQ+L+++GGPQ+SL NVVMELRKLCGHPYLL GVE  ++   + 
Sbjct: 550  LSSLQKEFYKAILTKNYQILAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEA 609

Query: 174  YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
             RQLLE SGKL+L+DKMM KL  QGHRVLIYSQF  MLDI+EDWL +KKW YERIDG
Sbjct: 610  NRQLLENSGKLLLLDKMMTKLHSQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDG 666


>tr|A9RX41|A9RX41_PHYPA SNF2 family DNA-dependent ATPase (Fragment)
            OS=Physcomitrella patens subsp. patens GN=CHR1512 PE=4
            SV=1
          Length = 1220

 Score =  286 bits (733), Expect = 4e-76
 Identities = 137/177 (77%), Positives = 159/177 (89%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FLDAGKF +LE+FQ+EF+D+NQEEQVGRLHKMLAPHLLRRVKKDV+K++PPKKELILRVE
Sbjct: 490  FLDAGKFNSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVE 549

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
            LSSLQKE+YKAILT+NYQ+L+++GGPQ+SL NVVMELRKLCGHPYLL GVE  ++   + 
Sbjct: 550  LSSLQKEFYKAILTKNYQILAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEA 609

Query: 174  YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
             RQLLE SGKL+L+DKMM KL  QGHRVLIYSQF  MLDI+EDWL +KKW YERIDG
Sbjct: 610  NRQLLENSGKLLLLDKMMTKLHAQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDG 666


>tr|A7P5Y0|A7P5Y0_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032703001
           PE=4 SV=1
          Length = 692

 Score =  285 bits (730), Expect = 8e-76
 Identities = 139/177 (78%), Positives = 160/177 (90%)
 Frame = -2

Query: 534 FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
           FLDAGKF +LE+FQEEFKD+NQEEQ+ RLHKMLAPHLLRRVKKDVMK+LPPKKELILRVE
Sbjct: 468 FLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVE 527

Query: 354 LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
           LSS QKEYYKAILTRNYQ+L+R+GG QISL NVVMELRKLC HPY+L GVE +++ + + 
Sbjct: 528 LSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIEDATEA 587

Query: 174 YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
           Y+ LLE+SGKL L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+ T KKW YERIDG
Sbjct: 588 YKLLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKKWQYERIDG 644


>tr|Q6YNJ6|Q6YNJ6_ORYSA Chromatin-remodeling factor CHD3 OS=Oryza
            sativa GN=PKL PE=2 SV=1
          Length = 1360

 Score =  239 bits (611), Expect = 5e-62
 Identities = 118/177 (66%), Positives = 147/177 (83%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL+   F ++ D QEEFKD+NQ++QV +LH ML PHLLRR KKDVMK+LPPKKELILRVE
Sbjct: 481  FLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVE 540

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
            L+S QKEYYKAILT+NY++L+R+ G  +SL NVVMELRKLC H + +    EE   S++ 
Sbjct: 541  LTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAF-MTDEPEEPANSEEA 599

Query: 174  YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
             R+LLE+SGK+ L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+L+ +KWSYERIDG
Sbjct: 600  LRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDG 656


>tr|Q6YNJ5|Q6YNJ5_ORYSI Chromatin-remodeling factor CHD3 OS=Oryza
            sativa subsp. indica GN=PKL PE=4 SV=1
          Length = 1111

 Score =  239 bits (611), Expect = 5e-62
 Identities = 118/177 (66%), Positives = 147/177 (83%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL+   F ++ D QEEFKD+NQ++QV +LH ML PHLLRR KKDVMK+LPPKKELILRVE
Sbjct: 481  FLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVE 540

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
            L+S QKEYYKAILT+NY++L+R+ G  +SL NVVMELRKLC H + +    EE   S++ 
Sbjct: 541  LTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAF-MTDEPEEPANSEEA 599

Query: 174  YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
             R+LLE+SGK+ L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+L+ +KWSYERIDG
Sbjct: 600  LRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDG 656


>tr|Q5SML0|Q5SML0_ORYSJ Chromatin-remodeling factor CHD3 OS=Oryza
            sativa subsp. japonica GN=OSJNBb0036B04.22 PE=4 SV=1
          Length = 1354

 Score =  239 bits (611), Expect = 5e-62
 Identities = 118/177 (66%), Positives = 147/177 (83%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL+   F ++ D QEEFKD+NQ++QV +LH ML PHLLRR KKDVMK+LPPKKELILRVE
Sbjct: 475  FLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVE 534

Query: 354  LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
            L+S QKEYYKAILT+NY++L+R+ G  +SL NVVMELRKLC H + +    EE   S++ 
Sbjct: 535  LTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAF-MTDEPEEPANSEEA 593

Query: 174  YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
             R+LLE+SGK+ L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+L+ +KWSYERIDG
Sbjct: 594  LRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDG 650


>tr|Q0DE21|Q0DE21_ORYSJ Os06g0183800 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os06g0183800 PE=4 SV=1
          Length = 1335

 Score =  239 bits (611), Expect = 5e-62
 Identities = 118/177 (66%), Positives = 147/177 (83%)
 Frame = -2

Query: 534 FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
           FL+   F ++ D QEEFKD+NQ++QV +LH ML PHLLRR KKDVMK+LPPKKELILRVE
Sbjct: 456 FLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVE 515

Query: 354 LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
           L+S QKEYYKAILT+NY++L+R+ G  +SL NVVMELRKLC H + +    EE   S++ 
Sbjct: 516 LTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAF-MTDEPEEPANSEEA 574

Query: 174 YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
            R+LLE+SGK+ L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+L+ +KWSYERIDG
Sbjct: 575 LRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDG 631


>tr|B8B3I5|B8B3I5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_21929 PE=4 SV=1
          Length = 1309

 Score =  239 bits (611), Expect = 5e-62
 Identities = 118/177 (66%), Positives = 147/177 (83%)
 Frame = -2

Query: 534 FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
           FL+   F ++ D QEEFKD+NQ++QV +LH ML PHLLRR KKDVMK+LPPKKELILRVE
Sbjct: 430 FLEGDSFGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVE 489

Query: 354 LSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKLCGHPYLLPGVEEEMKRSKDT 175
           L+S QKEYYKAILT+NY++L+R+ G  +SL NVVMELRKLC H + +    EE   S++ 
Sbjct: 490 LTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELRKLCCHAF-MTDEPEEPANSEEA 548

Query: 174 YRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERIDG 4
            R+LLE+SGK+ L+DKMMVKLKEQGHRVLIYSQF+ MLD++ED+L+ +KWSYERIDG
Sbjct: 549 LRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDG 605


>tr|A5BRA9|A5BRA9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_043258 PE=4 SV=1
          Length = 203

 Score =  214 bits (544), Expect = 3e-54
 Identities = 105/137 (76%), Positives = 122/137 (89%)
 Frame = -2

Query: 414 VKKDVMKDLPPKKELILRVELSSLQKEYYKAILTRNYQLLSRKGGPQISLNNVVMELRKL 235
           VKKDVMK+LPPKKELILRVELSS QKEYYKAILTRNYQ+L+R+GG QISL NVVMELRKL
Sbjct: 19  VKKDVMKELPPKKELILRVELSSKQKEYYKAILTRNYQILTRRGGAQISLINVVMELRKL 78

Query: 234 CGHPYLLPGVEEEMKRSKDTYRQLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDI 55
           C HPY+L GVE +++ + + Y+ LLE+SGKL L+DKMMVKLKEQGHRVLIYSQF+ MLD+
Sbjct: 79  CCHPYMLEGVEPDIEDATEAYKLLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDL 138

Query: 54  IEDWLTMKKWSYERIDG 4
           +ED+ T KKW YERIDG
Sbjct: 139 LEDYCTYKKWQYERIDG 155


>tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3
            short isoform (Fragment) OS=Rattus norvegicus GN=Chd3
            PE=2 SV=1
          Length = 1925

 Score =  193 bits (491), Expect = 4e-48
 Identities = 99/181 (54%), Positives = 133/181 (73%), Gaps = 4/181 (2%)
 Frame = -2

Query: 534  FLDAGKFANLEDFQEEFKDLNQEEQVGRLHKMLAPHLLRRVKKDVMKDLPPKKELILRVE 355
            FL   +F NLE F EEF D+++E+Q+ +LH +L PH+LRR+K DV K++P K ELI+RVE
Sbjct: 884  FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE 943

Query: 354  LSSLQKEYYKAILTRNYQLL-SRKGGPQISLNNVVMELRKLCGHPYLLP-GVEEEMKRSK 181
            LS +QK+YYK ILTRN++ L SR GG Q+SL N++M+L+K C HPYL P    E  K   
Sbjct: 944  LSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPS 1003

Query: 180  DTYR--QLLEASGKLVLMDKMMVKLKEQGHRVLIYSQFKIMLDIIEDWLTMKKWSYERID 7
              Y    L+++SGKL+L+ KM+ KLKEQGHRVLI+SQ   MLD++ED+L  + + YERID
Sbjct: 1004 GAYEGGALIKSSGKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERID 1063

Query: 6    G 4
            G
Sbjct: 1064 G 1064