BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921397|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_D05.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2II25|PGK_ANADE Phosphoglycerate kinase OS=Anaeromyxobacter ...    30   5.0  
sp|Q7NI70|PGK_GLOVI Phosphoglycerate kinase OS=Gloeobacter viola...    30   6.5  
sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficienc...    30   6.6  
sp|Q77372|GAG_HV1AN Gag polyprotein OS=Human immunodeficiency vi...    30   6.6  
sp|Q04G42|PGK_OENOB Phosphoglycerate kinase OS=Oenococcus oeni (...    30   8.5  
sp|Q4V8B0|OXR1_RAT Oxidation resistance protein 1 OS=Rattus norv...    30   8.6  
sp|P56400|GP1BB_MOUSE Platelet glycoprotein Ib beta chain OS=Mus...    30   8.6  

>sp|Q2II25|PGK_ANADE Phosphoglycerate kinase OS=Anaeromyxobacter
           dehalogenans (strain 2CP-C) GN=pgk PE=3 SV=1
          Length = 396

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 268 AKSKLGIVEQQAHRRRNAGSFNHFLEPRNLPGLVACK 378
           A  + G+V++  H     G+   F+E R LPG+ AC+
Sbjct: 359 AVEQAGLVDKMKHVSTGGGASLEFIEGRELPGVKACE 395


>sp|Q7NI70|PGK_GLOVI Phosphoglycerate kinase OS=Gloeobacter
           violaceus GN=pgk PE=3 SV=1
          Length = 407

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 20/69 (28%), Positives = 32/69 (46%)
 Frame = +1

Query: 166 LPNFVIMVASTA*FAAKHPKIFLTGTQNKKSG*IAKSKLGIVEQQAHRRRNAGSFNHFLE 345
           LP F     + A   A+   + + G  +  S   A  K G+V++ +H     G+   FLE
Sbjct: 338 LPGFSKGTFAVAHALAESDNLSIVGGGDSAS---AAEKAGVVDKLSHVSTGGGASLEFLE 394

Query: 346 PRNLPGLVA 372
            + LPG+ A
Sbjct: 395 GKTLPGVAA 403


>sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficiency
           virus type 1 (isolate ANT70 group O) GN=gag-pol PE=3
           SV=3
          Length = 1435

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +3

Query: 150 KRSPNPAKFRNYGCVNCLICG*AP*NLLDGHPKQEIRLNCKKQAWNCGAAGSQ 308
           +R  NP +    G + C  CG       +GH  +  R   KK  W CG  G Q
Sbjct: 383 QRGQNPIR---KGTIKCFNCG------KEGHIARNCRAPRKKGCWKCGQEGHQ 426


>sp|Q77372|GAG_HV1AN Gag polyprotein OS=Human immunodeficiency virus
           type 1 (isolate ANT70 group O) GN=gag PE=3 SV=3
          Length = 498

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +3

Query: 150 KRSPNPAKFRNYGCVNCLICG*AP*NLLDGHPKQEIRLNCKKQAWNCGAAGSQ 308
           +R  NP +    G + C  CG       +GH  +  R   KK  W CG  G Q
Sbjct: 383 QRGQNPIR---KGTIKCFNCG------KEGHIARNCRAPRKKGCWKCGQEGHQ 426


>sp|Q04G42|PGK_OENOB Phosphoglycerate kinase OS=Oenococcus oeni
           (strain BAA-331 / PSU-1) GN=pgk PE=3 SV=1
          Length = 404

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 268 AKSKLGIVEQQAHRRRNAGSFNHFLEPRNLPGLVA 372
           A S+LGI +Q  H     G+   +LE + LPG+ A
Sbjct: 366 AVSQLGIADQFTHISTGGGASLEYLEGKTLPGIAA 400


>sp|Q4V8B0|OXR1_RAT Oxidation resistance protein 1 OS=Rattus
           norvegicus GN=Oxr1 PE=1 SV=2
          Length = 758

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = +2

Query: 401 RESAHINTPADAHQQQARG*NKQLEKEIHRLADFYC 508
           RES H   PADAH     G +   EK  HRL  F C
Sbjct: 439 RESKHRGAPADAH---GEGSSLLKEKRRHRLHKFLC 471


>sp|P56400|GP1BB_MOUSE Platelet glycoprotein Ib beta chain OS=Mus
           musculus GN=Gp1bb PE=1 SV=1
          Length = 206

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 63  VPAKTAAHVSTFFMSQECRFLPCRSLFLGKRSPNPAKFRNYGCV 194
           +PA  AAH+       +CR LP R+   G+  P  A +R+  CV
Sbjct: 78  LPALRAAHLGANPWRCDCRLLPLRAWLAGR--PERAPYRDLRCV 119

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921397|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_D05.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8QDY9|Q8QDY9_9HIV1 Gag polyprotein (Fragment) OS=Human immun...    34   4.7  
tr|Q8QDX0|Q8QDX0_9HIV1 Gag polyprotein OS=Human immunodeficiency...    34   4.7  

>tr|Q8QDY9|Q8QDY9_9HIV1 Gag polyprotein (Fragment) OS=Human
           immunodeficiency virus 1 GN=gag PE=4 SV=1
          Length = 219

 Score = 33.9 bits (76), Expect = 4.7
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 168 AKFRNYGCVNCLICG*AP*NLLDGHPKQEIRLNCKKQAWNCGAAGSQ 308
           + FR    + C  CG       DGHP +  R   KK  W CG  G Q
Sbjct: 101 SNFRGPKRIKCFNCG------KDGHPARNCRAPRKKGCWKCGKEGHQ 141


>tr|Q8QDX0|Q8QDX0_9HIV1 Gag polyprotein OS=Human immunodeficiency
           virus 1 GN=gag PE=4 SV=1
          Length = 498

 Score = 33.9 bits (76), Expect = 4.7
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = +3

Query: 168 AKFRNYGCVNCLICG*AP*NLLDGHPKQEIRLNCKKQAWNCGAAGSQ 308
           + FR    + C  CG       DGHP +  R   KK  W CG  G Q
Sbjct: 380 SNFRGPKRIKCFNCG------KDGHPARNCRAPRKKGCWKCGKEGHQ 420