BP921398
Clone id YMU001_000149_D06
Library
Length 439
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TATGAGAGCCCCCCTTGAGCTTACAGATGACTGGAAGCTTTGTTGGACAGCCATTTAGAG
ATGGATGGTACAGCTTGCAATACACAATCATAAATAAGAAAGAGAGCTTAAGGAAGAGTA
AGGGACATTTCTGCAAGGAGTTTTGTTTCTAACCAGTTTGCAAATGAGTTCTGAAGTCAA
GCCAAGTCCTACTAAGGCTAAAGCCAGTGTATGAATAGTCACCCCTCTCCTTGTAGCAGT
AAAGTAGGCTGCCCTTCTGGTAAAGTGGGCTAAATGCTATTGACGGTTAGCAGCAGCTGA
TCCACACAACCAAATCGATGAACTAGTTCTCTATTTAGTGACTATCAAATTTGGTCTAAG
GAAAAGCACAAGCGTGACTCAATTCCCCTCTGGAGGGTTTTGATGGATAATGCTTTGAAG
CGCAAAGGATGGAGGTTGC
■■Homology search results ■■ -
sp_hit_id Q9SX93
Definition sp|Q9SX93|PUP19_ARATH Putative purine permease 19 OS=Arabidopsis thaliana
Align length 67
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921398|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_D06.
(439 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9SX93|PUP19_ARATH Putative purine permease 19 OS=Arabidopsis... 32 1.5
sp|Q3AUH7|DNLJ_SYNS9 DNA ligase OS=Synechococcus sp. (strain CC9... 30 5.7
sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus... 29 9.8

>sp|Q9SX93|PUP19_ARATH Putative purine permease 19 OS=Arabidopsis
thaliana GN=PUP19 PE=3 SV=1
Length = 392

Score = 31.6 bits (70), Expect = 1.5
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = -1

Query: 268 PLYQKGSLLYCYKERGDYSYTGFSLSRTWLDFRTHLQTG*KQNSLQKCPLLFLKLSFLFM 89
P KG+ L + + +T F L F TH +T +S K LL++ L LF
Sbjct: 81 PKQFKGTWLQSMVQNAAFPFTAFLLLLWRSSFSTHSETSSSSSSFGKLFLLYISLGVLF- 139

Query: 88 IVYCKLY 68
Y +LY
Sbjct: 140 AAYSQLY 146


>sp|Q3AUH7|DNLJ_SYNS9 DNA ligase OS=Synechococcus sp. (strain
CC9902) GN=ligA PE=3 SV=1
Length = 680

Score = 29.6 bits (65), Expect = 5.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3

Query: 161 ANWLETKLLAEMSLTLP*ALFLIYDCVLQAVPSISKWLSNKASSHL 24
A + ++ L E + T P + IY + S+ +W SN A+ HL
Sbjct: 530 AEFSDSNSLMEAACTAPERITAIYGIGTELAQSLQQWFSNPANQHL 575


>sp|Q8NKE1|GLGB_GLOIN 1,4-alpha-glucan-branching enzyme OS=Glomus
intraradices GN=GLC3 PE=2 SV=1
Length = 683

Score = 28.9 bits (63), Expect = 9.8
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +1

Query: 310 PNR*TSSLFSDYQIWSKEKH--KRDSIPLWRV 399
PN +SL ++ W + KH K+DS +W V
Sbjct: 78 PNAVAASLIGEFNDWDRSKHPMKKDSFGVWEV 109


tr_hit_id Q24CK8
Definition tr|Q24CK8|Q24CK8_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 79
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921398|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_D06.
(439 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q24CK8|Q24CK8_TETTH Putative uncharacterized protein OS=Tetra... 35 2.4

>tr|Q24CK8|Q24CK8_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01220410 PE=4
SV=1
Length = 184

Score = 34.7 bits (78), Expect = 2.4
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -1

Query: 310 VVWISCC*PSIAFSPLYQKGSLLYCYKERGDYSYTGFSLSRTWLDFRTHLQTG*KQNSLQ 131
++WI PS+ SPL +G+ Y + Y +T F+ ++L F K LQ
Sbjct: 9 IIWI----PSLLGSPLDSQGNSCYLLQT---YIFT-FNSYCSFLAFLDQSSCRKKLRKLQ 60

Query: 130 KCPLLFLKLSFLFMIVYCK 74
K P L S +F+I+YC+
Sbjct: 61 KFPFRKLYTSMIFLIIYCQ 79