BP921399 |
Clone id |
YMU001_000149_D07 |
Library |
YMU01 |
Length |
573 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_D07. |
Accession |
BP921399 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACACACATCACCCACATACAATCAGATGCCTGCAATTACACTATCACAGAAAAGGCGTC ACCTTCCAGAACCCCCAGAAGCCAACATGGATACAATGCTCAGCTCATTACCCAAAAAAG GGAGGCTTCTGGAAGCTGTATTGCAAGCAGGGCCTCTACTACAGCAGCTGATGCTCACAG GGCCAATGCCACAATGGCAACATCGACCCCGGAAGCTTAACACAACACAAATTCTGAAGG TACCCACATCGCCCAACAGTGTCCTGTCGCCCTTCTCGAATGCGCAAAACTCACCATTAT GCCTCTATGCCAACCAGTTTCCATTTACAAGCACAATATAAGAAATTTTCTCCTGTAAAC TTCCGGCATAGTCTGCATGCATACCCCATCATCTTCCTCAAGATGTAGAAATTCTGTTTC ATGAGATGGATAGCGCACAAAGCGGCCCTGGCTGCATGGTGACCACCCTTGATGCACACT TTACATTCAAACCGGTATCACGAAACCTACATCAGCATGCTTGAGAAGCAGCCTCAATGG GCACGAGAAGTGCTCGCTTGCGAGCCCATCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q03051 |
Definition |
sp|Q03051|YD543_YEAST UPF0320 protein YDR543C OS=Saccharomyces cerevisiae |
Align length |
65 |
Score (bit) |
32.3 |
E-value |
1.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SMI5 |
Definition |
tr|A9SMI5|A9SMI5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
67 |
Score (bit) |
88.2 |
E-value |
3.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921399|Adiantum capillus-veneris mRNA, clone: YMU001_000149_D07. (573 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SMI5|A9SMI5_PHYPA Predicted protein (Fragment) OS=Physcomit... 88 3e-16 tr|A9T553|A9T553_PHYPA Predicted protein (Fragment) OS=Physcomit... 77 7e-13 tr|A7PHZ5|A7PHZ5_VITVI Chromosome chr13 scaffold_17, whole genom... 73 1e-11 tr|Q9ZUV6|Q9ZUV6_ARATH Putative uncharacterized protein At2g2814... 65 3e-09 tr|Q84RJ2|Q84RJ2_ARATH Putative uncharacterized protein At2g2814... 65 3e-09 tr|Q6DR55|Q6DR55_ARATH Putative uncharacterized protein OS=Arabi... 65 3e-09 tr|Q9LXI1|Q9LXI1_ARATH Putative uncharacterized protein F14D17_1... 63 1e-08 tr|Q84JJ0|Q84JJ0_ARATH Putative uncharacterized protein At3g4494... 63 1e-08 tr|A7PQQ1|A7PQQ1_VITVI Chromosome chr6 scaffold_25, whole genome... 62 2e-08 tr|Q9FFB5|Q9FFB5_ARATH Emb|CAB89309.1 OS=Arabidopsis thaliana GN... 62 3e-08 tr|Q8L8B0|Q8L8B0_ARATH Putative uncharacterized protein At2g2814... 60 9e-08 tr|Q7XRM6|Q7XRM6_ORYSJ OSJNBa0095E20.10 protein OS=Oryza sativa ... 57 6e-07 tr|A3AQJ9|A3AQJ9_ORYSJ Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|A2XQ08|A2XQ08_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|Q9SIA6|Q9SIA6_ARATH Putative uncharacterized protein At2g2869... 55 2e-06 tr|Q8L8B6|Q8L8B6_ARATH Putative uncharacterized protein At2g2869... 55 2e-06 tr|A5ARE7|A5ARE7_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|A7NZ70|A7NZ70_VITVI Chromosome chr6 scaffold_3, whole genome ... 53 1e-05 tr|A5BSF7|A5BSF7_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|Q65XA8|Q65XA8_ORYSJ Os05g0115100 protein OS=Oryza sativa subs... 49 2e-04 tr|B8AXA5|B8AXA5_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|A3AZB1|A3AZB1_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|B6TS50|B6TS50_MAIZE Putative uncharacterized protein OS=Zea m... 48 4e-04 tr|Q9FN88|Q9FN88_ARATH Gb|AAD24366.1 OS=Arabidopsis thaliana GN=... 47 8e-04 tr|Q58FT1|Q58FT1_ARATH Putative uncharacterized protein OS=Arabi... 47 8e-04 tr|Q9FIB3|Q9FIB3_ARATH Gb|AAD24366.1 OS=Arabidopsis thaliana GN=... 42 0.032 tr|B7U9V1|B7U9V1_CARAS AT5G09940-like protein OS=Cardaminopsis a... 41 0.041 tr|B3M2C6|B3M2C6_DROAN GF17921 OS=Drosophila ananassae GN=GF1792... 41 0.041 tr|A5BFW4|A5BFW4_VITVI Putative uncharacterized protein OS=Vitis... 40 0.092 tr|Q17A66|Q17A66_AEDAE Mixed-lineage leukemia protein, mll OS=Ae... 39 0.20
>tr|A9SMI5|A9SMI5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18083 PE=4 SV=1 Length = 152
Score = 88.2 bits (217), Expect = 3e-16 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = +3
Query: 42 LSQKRRHLPEPPEANMDTMLSSLPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLN 221 LS + HLPEPPE+++ ML+SLP+KG+LL+AV+QAGPLLQ L++ GP+PQW+H P L+ Sbjct: 86 LSSRPVHLPEPPESDLQVMLNSLPEKGKLLQAVMQAGPLLQTLLVAGPLPQWRHPPPALD 145
Query: 222 TTQILKV 242 T I +V Sbjct: 146 TLDIPRV 152
>tr|A9T553|A9T553_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18084 PE=4 SV=1 Length = 142
Score = 77.0 bits (188), Expect = 7e-13 Identities = 33/57 (57%), Positives = 47/57 (82%) Frame = +3
Query: 72 PPEANMDTMLSSLPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQILKV 242 PPE+++ ML+SLP+KG+LL+AV+QAGPLLQ L++ GP+PQW+H P L+T I +V Sbjct: 86 PPESDLQVMLNSLPEKGKLLQAVMQAGPLLQTLLVAGPLPQWRHPPPALDTLDIPRV 142
>tr|A7PHZ5|A7PHZ5_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018137001 PE=4 SV=1 Length = 243
Score = 73.2 bits (178), Expect = 1e-11 Identities = 42/102 (41%), Positives = 66/102 (64%), Gaps = 5/102 (4%) Frame = +3
Query: 36 ITLSQKRRHLPEPPEANMDTMLSS-LPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPR 212 I+LS ++ + +P +AN+ + LP+KG+LL+AVL+AGPLLQ L+L GP+PQWQH P Sbjct: 126 ISLSPRKEPISQP-QANLKLLAEKPLPEKGKLLQAVLEAGPLLQTLLLAGPLPQWQHPPP 184
Query: 213 KLNTTQI--LKVPTSPN-SVLSPFSNAQ-NSPLCLYANQFPF 326 +L++ +I + +P+ P +L P S N+ C Q P+ Sbjct: 185 QLDSIEIPPVAIPSPPTPPLLHPDSCVNVNASFCKKRGQAPY 226
>tr|Q9ZUV6|Q9ZUV6_ARATH Putative uncharacterized protein At2g28140 OS=Arabidopsis thaliana GN=At2g28140 PE=4 SV=1 Length = 211
Score = 64.7 bits (156), Expect = 3e-09 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3
Query: 69 EPP-EANMDTMLSSLPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQILKVP 245 EPP E +D +LP+KG+LL+AV++AGPLLQ L+L G +PQW+H P +L + +I V Sbjct: 116 EPPVEIELDFPEMTLPEKGKLLKAVVKAGPLLQTLLLAGQLPQWRHPPPQLESFEIPPVI 175
Query: 246 TSPNSVLSPFSNAQN 290 + S LS S N Sbjct: 176 IAEGSPLSQDSCGNN 190
>tr|Q84RJ2|Q84RJ2_ARATH Putative uncharacterized protein At2g28140/F24D13.7 OS=Arabidopsis thaliana GN=At2g28140/F24D13.7 PE=2 SV=1 Length = 211
Score = 64.7 bits (156), Expect = 3e-09 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3
Query: 69 EPP-EANMDTMLSSLPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQILKVP 245 EPP E +D +LP+KG+LL+AV++AGPLLQ L+L G +PQW+H P +L + +I V Sbjct: 116 EPPVEIELDFPEMTLPEKGKLLKAVVKAGPLLQTLLLAGQLPQWRHPPPQLESFEIPPVI 175
Query: 246 TSPNSVLSPFSNAQN 290 + S LS S N Sbjct: 176 IAEGSPLSQDSCGNN 190
>tr|Q6DR55|Q6DR55_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At2g28140 PE=2 SV=1 Length = 211
Score = 64.7 bits (156), Expect = 3e-09 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3
Query: 69 EPP-EANMDTMLSSLPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQILKVP 245 EPP E +D +LP+KG+LL+AV++AGPLLQ L+L G +PQW+H P +L + +I V Sbjct: 116 EPPVEIELDFPEMTLPEKGKLLKAVVKAGPLLQTLLLAGQLPQWRHPPPQLESFEIPPVI 175
Query: 246 TSPNSVLSPFSNAQN 290 + S LS S N Sbjct: 176 IAEGSPLSQDSCGNN 190
>tr|Q9LXI1|Q9LXI1_ARATH Putative uncharacterized protein F14D17_10 OS=Arabidopsis thaliana GN=F14D17_10 PE=4 SV=1 Length = 220
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 6/58 (10%) Frame = +3
Query: 78 EANMDTMLSSL------PKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQI 233 E + D ML++L P+KG+LL+AV++AGPLLQ L+L GP+PQW+H P L T++I Sbjct: 121 EVSGDEMLATLLPDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPPPLETSEI 178
>tr|Q84JJ0|Q84JJ0_ARATH Putative uncharacterized protein At3g44940 OS=Arabidopsis thaliana GN=At3g44940 PE=2 SV=1 Length = 250
Score = 63.2 bits (152), Expect = 1e-08 Identities = 30/58 (51%), Positives = 43/58 (74%), Gaps = 6/58 (10%) Frame = +3
Query: 78 EANMDTMLSSL------PKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQI 233 E + D ML++L P+KG+LL+AV++AGPLLQ L+L GP+PQW+H P L T++I Sbjct: 151 EVSGDEMLATLLPDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRHPPPPLETSEI 208
>tr|A7PQQ1|A7PQQ1_VITVI Chromosome chr6 scaffold_25, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022151001 PE=4 SV=1 Length = 224
Score = 62.4 bits (150), Expect = 2e-08 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 5/68 (7%) Frame = +3
Query: 108 LPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQHRPRKLNTTQILKV-----PTSPNSVLSP 272 LP+KG+LL+AV++AGPLLQ L+L GP+PQW+H P L + +I V P P +L Sbjct: 123 LPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPHLESFEIPPVTIPSQPPPPQPLLHQ 182
Query: 273 FSNAQNSP 296 S +SP Sbjct: 183 DSLINSSP 190
>tr|Q9FFB5|Q9FFB5_ARATH Emb|CAB89309.1 OS=Arabidopsis thaliana GN=At5g22930 PE=4 SV=1 Length = 248
Score = 61.6 bits (148), Expect = 3e-08 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 12/70 (17%) Frame = +3
Query: 60 HLPEPP----------EANMDTMLSS--LPKKGRLLEAVLQAGPLLQQLMLTGPMPQWQH 203 H+ PP E MD +L LP+KG+LL+AV++AGPLLQ L+L GP+PQW+H Sbjct: 140 HIMNPPPCQLEEVSGTEIIMDPLLQDKPLPEKGKLLQAVIKAGPLLQTLLLAGPLPQWRH 199
Query: 204 RPRKLNTTQI 233 P L + +I Sbjct: 200 PPPPLKSFEI 209
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