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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921408
Clone id YMU001_000149_E04
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAAGGTGTGACTCGTAAATCTTTGGAAATGGTTGGAGCATTGGTCATTCCATATGACAT
GACACAATAGGTAAAAATACCCCATTCTGTAGTAGCAAAAGCTACTCTATTTTGGTCTCA
AGGATGTATAGTCAATTGGTTGTATCCGGAGAATCCACTCAAGAAGCTATGCACTTTCCC
TACTACTCTTTCCAATACATGTTTTGACATAGGTAGGGGATAGTTGTCTCCAATGGTGGT
TGTGTTCACCTTTTTGAGGTTGACATACGTCCACAATATAAAAAACCCAATCAGTGTATT
TTATTTCATAGATGAACTCAACTTTTGTAACTTTATATATCTCCTTTATTCTCCTTGCAA
ATGTTTCATTGTATTTGTATGACCTTTGCTACGTTGGTTTTAGATCCTCCTCATGAGTAT
AGTATGCTAGTAGATCTCAAGATCTACCCCCTTCAAATCTATGACCAGGCAAACACATCC
CTATATTCTCTCAGTATTTTGATATGGATGTGCTCTTCCTCCTGAATGAGATCAGTGGCT
AT
■■Homology search results ■■ -
sp_hit_id P15629
Definition sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic mottle virus
Align length 80
Score (bit) 56.2
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921408|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E04.
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic m...    56   1e-07
sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf...    44   4e-04
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra...    44   5e-04
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...    43   0.001
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra...    43   0.001
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra...    42   0.002
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...    42   0.003
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...    42   0.003
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra...    40   0.006
sp|O94316|SN114_SCHPO 114 kDa U5 small nuclear ribonucleoprotein...    31   4.5  
sp|P24876|ATP6_ASCSU ATP synthase subunit a OS=Ascaris suum GN=A...    31   4.5  
sp|Q89AY1|DAPE_BUCBP Succinyl-diaminopimelate desuccinylase OS=B...    30   9.9  

>sp|P15629|POL_SOCMV Enzymatic polyprotein OS=Soybean chlorotic
           mottle virus GN=ORF V PE=3 SV=2
          Length = 692

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKV-HSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           +N KK+N  TIGD+Y LP    +LE++ G +  S L   SGY QL +H   +   AF+  
Sbjct: 261 INYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKSGYYQLRLHENTKPLTAFSCP 320

Query: 87  EWGIFTYCVMSYGMTNAPTI 28
               + + V+S+G+  AP+I
Sbjct: 321 PQKHYEWNVLSFGLKQAPSI 340


>sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf
           curling virus GN=ORF V PE=3 SV=1
          Length = 643

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKV-HSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           +N K +N  TIG+ + LP    +L +V G    S L   SGY QL +HP  +   AF+  
Sbjct: 260 INYKALNKATIGNAHKLPRIDSILTKVKGSNWFSTLDAKSGYWQLRLHPQSKPLTAFSCP 319

Query: 87  EWGIFTYCVMSYGMTNAPTI 28
               + + V+ +G+  AP I
Sbjct: 320 PQKHYQWNVLPFGLKQAPGI 339


>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
           transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1058

 Score = 43.9 bits (102), Expect = 5e-04
 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91
           ++ +K+N  T+GD +P+P    +L + +G+ + F  +    G++Q+ + P   ++ AF +
Sbjct: 266 IDYRKLNEITVGDRHPIPNMDEILGK-LGRCNYFTTIDLAKGFHQIEMDPESVSKTAF-S 323

Query: 90  TEWGIFTYCVMSYGMTNAP 34
           T+ G + Y  M +G+ NAP
Sbjct: 324 TKHGHYEYLRMPFGLKNAP 342


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           V+ K +N     + YPLP+ + +L ++ G  + + L   S Y+ + +   D++++AF   
Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525

Query: 87  EWGIFTYCVMSYGMTNAP 34
             G+F Y VM YG++ AP
Sbjct: 526 R-GVFEYLVMPYGISTAP 542


>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
           transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1035

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91
           ++ +K+N  TI D YP+P    +L   +GK   F  L   SGY+Q+ +   D+ + +F +
Sbjct: 241 IDFRKLNEKTIPDRYPMPSIPMILAN-LGKAKFFTTLDLKSGYHQIYLAEHDREKTSF-S 298

Query: 90  TEWGIFTYCVMSYGMTNAPTI 28
              G + +C + +G+ NA +I
Sbjct: 299 VNGGKYEFCRLPFGLRNASSI 319


>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
           transposon opus OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1003

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERV-VGKVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           V+ K++NT TI D YP+P     L  +   K  + L   SG++Q+ +   D  + AF+T 
Sbjct: 182 VDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTL 241

Query: 87  EWGIFTYCVMSYGMTNAPTI 28
             G + +  + +G+ NAP I
Sbjct: 242 N-GKYEFLRLPFGLKNAPAI 260


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           V+ K +N     + YPLP+ + +L ++ G  + + L   S Y+ + +   D++++AF   
Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525

Query: 87  EWGIFTYCVMSYGMTNAP 34
             G+F Y VM YG++ AP
Sbjct: 526 R-GVFEYLVMPYGISIAP 542


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
           type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           V+ K +N     + YPLP+ + +L ++ G  + + L   S Y+ + +   D++++AF   
Sbjct: 466 VDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCP 525

Query: 87  EWGIFTYCVMSYGMTNAP 34
             G+F Y VM YG++ AP
Sbjct: 526 R-GVFEYLVMPYGISIAP 542


>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
           transposon 297 OS=Drosophila melanogaster GN=pol PE=4
           SV=1
          Length = 1059

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF--LSGFSGYNQLTIHP*DQNRVAFAT 91
           ++ +K+N  TI D YP+P    +L + +GK   F  +    G++Q+ +     ++ AF+T
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGK-LGKCQYFTTIDLAKGFHQIEMDEESISKTAFST 323

Query: 90  TEWGIFTYCVMSYGMTNAP 34
              G + Y  M +G+ NAP
Sbjct: 324 KS-GHYEYLRMPFGLRNAP 341


>sp|O94316|SN114_SCHPO 114 kDa U5 small nuclear ribonucleoprotein
           component homolog OS=Schizosaccharomyces pombe GN=cwf10
           PE=1 SV=1
          Length = 983

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = -2

Query: 436 DLLAYYTHEEDLKPT*QRSYKYNETF---ARRIKEIYKVTKVEFIYEIKYTDWVFYIVD 269
           DLL YYTH  D KP  +RS +Y +T      R+  I        + ++K   + F  +D
Sbjct: 158 DLLVYYTH-PDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAFQCID 215
tr_hit_id A5BSK0
Definition tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 77
Score (bit) 57.0
E-value 6.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921408|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E04.
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis...    57   6e-12
tr|Q5W798|Q5W798_ORYSJ Putative polyprotein OS=Oryza sativa subs...    65   4e-11
tr|Q5W6X6|Q5W6X6_ORYSJ Putative polyprotein OS=Oryza sativa subs...    65   4e-11
tr|Q946T2|Q946T2_PEA Reverse transcriptase (Fragment) OS=Pisum s...    69   5e-11
tr|Q946T3|Q946T3_PEA Reverse transcriptase (Fragment) OS=Pisum s...    68   6e-11
tr|Q946T4|Q946T4_PEA Reverse transcriptase (Fragment) OS=Pisum s...    70   7e-11
tr|Q946U3|Q946U3_AVESA Reverse transcriptase (Fragment) OS=Avena...    63   8e-11
tr|Q9M0T8|Q9M0T8_ARATH Putative athila transposon protein OS=Ara...    63   1e-10
tr|Q2QTI9|Q2QTI9_ORYSJ Retrotransposon protein, putative, Ty3-gy...    64   2e-10
tr|Q946T1|Q946T1_SORBI Reverse transcriptase (Fragment) OS=Sorgh...    65   2e-10
tr|A5AH94|A5AH94_VITVI Putative uncharacterized protein OS=Vitis...    50   2e-10
tr|Q0J6S9|Q0J6S9_ORYSJ Os08g0271300 protein OS=Oryza sativa subs...    56   3e-10
tr|Q946T0|Q946T0_SOYBN Reverse transcriptase (Fragment) OS=Glyci...    65   4e-10
tr|Q946U6|Q946U6_ORYSA Reverse transcriptase (Fragment) OS=Oryza...    62   4e-10
tr|Q946U1|Q946U1_AVESA Reverse transcriptase (Fragment) OS=Avena...    60   5e-10
tr|Q946S9|Q946S9_SOYBN Reverse transcriptase (Fragment) OS=Glyci...    63   6e-10
tr|Q7XQC1|Q7XQC1_ORYSJ OSJNBb0060M15.10 protein (OSJNBb0021I10.3...    62   8e-10
tr|Q7XNX7|Q7XNX7_ORYSJ OSJNBb0026I12.3 protein OS=Oryza sativa s...    67   8e-10
tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ...    66   1e-09
tr|Q2AA42|Q2AA42_ASPOF F7F22.17, putative OS=Asparagus officinal...    66   1e-09
tr|A5C656|A5C656_VITVI Putative uncharacterized protein OS=Vitis...    54   1e-09
tr|Q75H60|Q75H60_ORYSJ Putative reverse transcriptase OS=Oryza s...    65   2e-09
tr|Q10GV1|Q10GV1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    65   2e-09
tr|Q0ZCD0|Q0ZCD0_POPTR Integrase OS=Populus trichocarpa PE=2 SV=1      65   3e-09
tr|Q946U4|Q946U4_HORVU Reverse transcriptase (Fragment) OS=Horde...    59   3e-09
tr|Q946T7|Q946T7_WHEAT Reverse transcriptase (Fragment) OS=Triti...    60   4e-09
tr|Q946T5|Q946T5_GOSHI Reverse transcriptase (Fragment) OS=Gossy...    61   4e-09
tr|Q7X639|Q7X639_ORYSJ OSJNBb0067G11.5 protein OS=Oryza sativa s...    64   5e-09
tr|Q946S8|Q946S8_ARATH Reverse transcriptase (Fragment) OS=Arabi...    62   7e-09
tr|Q946U2|Q946U2_AVESA Reverse transcriptase (Fragment) OS=Avena...    59   7e-09

>tr|A5BSK0|A5BSK0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034374 PE=4 SV=1
          Length = 1030

 Score = 57.0 bits (136), Expect(3) = 6e-12
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVG-KVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           V+ + +N  +  D++PLP    +++   G  + SF+ GFSGY+Q+ + P D  + +F  T
Sbjct: 374 VDFRDLNKASPKDDFPLPHIDMLVDSTAGHSMLSFMDGFSGYSQILMAPEDMEKTSF-IT 432

Query: 87  EWGIFTYCVMSYGMTNA 37
           EWG + Y VM +G+ NA
Sbjct: 433 EWGTYCYRVMPFGLKNA 449



 Score = 30.4 bits (67), Expect(3) = 6e-12
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 542 IATDLIQEEEHIHIKILREYRDVFAWS 462
           I +DL  +E    I++LR Y DVFAWS
Sbjct: 269 IGSDLSTDERDGLIQLLRSYLDVFAWS 295



 Score = 25.8 bits (55), Expect(3) = 6e-12
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -2

Query: 400 KPT*QRSYKYNETFARRIKE-IYKVTKVEFIYEIKYTDWVFYIVDV 266
           +P  Q+  + +  ++ ++KE I K   V F+  +KY +W+  +V V
Sbjct: 318 RPVKQKLRRLHPRWSLQVKEEIQKQLSVGFLSVVKYPEWLANVVPV 363


>tr|Q5W798|Q5W798_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
           japonica GN=OJ1045_C06.5 PE=4 SV=1
          Length = 1005

 Score = 65.5 bits (158), Expect(2) = 4e-11
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94
           ++ +K+N  T  D++PLP    +LER+    HSF   L G+SGY+Q+ IHP DQ++  F 
Sbjct: 747 IDYRKLNKATKKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPEDQSKTTF- 803

Query: 93  TTEWGIFTYCVMSYGMTNAP 34
           T  +G + Y  MS+G+ NAP
Sbjct: 804 TCPYGTYAYRRMSFGLCNAP 823



 Score = 25.4 bits (54), Expect(2) = 4e-11
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE+ K+     IY + Y++WV  +  V  P+KG
Sbjct: 692 KEVLKLLHAGIIYPVPYSEWVSPVQVV--PKKG 722


>tr|Q5W6X6|Q5W6X6_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0036C12.21 PE=4 SV=1
          Length = 963

 Score = 65.5 bits (158), Expect(2) = 4e-11
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94
           ++ +K+N  T  D++PLP    +LER+    HSF   L G+SGY+Q+ IHP DQ++  F 
Sbjct: 742 IDYRKLNKATKKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPEDQSKTTF- 798

Query: 93  TTEWGIFTYCVMSYGMTNAP 34
           T  +G + Y  MS+G+ NAP
Sbjct: 799 TCPYGTYAYRRMSFGLCNAP 818



 Score = 25.4 bits (54), Expect(2) = 4e-11
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE+ K+     IY + Y++WV  +  V  P+KG
Sbjct: 687 KEVLKLLHAGIIYPVPYSEWVSPVQVV--PKKG 717


>tr|Q946T2|Q946T2_PEA Reverse transcriptase (Fragment) OS=Pisum
           sativum PE=4 SV=1
          Length = 254

 Score = 68.6 bits (166), Expect(2) = 5e-11
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +++NT T  D++PLP    +LER+ G+  + FL G+SGYNQ+ + P D  + AF T 
Sbjct: 58  IDYRRLNTATRKDHFPLPFMDQMLERLSGQQYYCFLDGYSGYNQIAVDPADHEKTAF-TC 116

Query: 87  EWGIFTYCVMSYGMTNAP 34
            +G+F Y  M +G+ NAP
Sbjct: 117 PFGVFAYRKMPFGLCNAP 134



 Score = 22.3 bits (46), Expect(2) = 5e-11
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE++K+     IY I  + WV  +  V  P+KG
Sbjct: 3   KEVFKLLDAGMIYPISDSPWVSPVHVV--PKKG 33


>tr|Q946T3|Q946T3_PEA Reverse transcriptase (Fragment) OS=Pisum
           sativum PE=4 SV=1
          Length = 254

 Score = 68.2 bits (165), Expect(2) = 6e-11
 Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGK-VHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +++NT T  D++PLP    +LER+ G+  + FL G+SGYNQ+ + P D  + AF T 
Sbjct: 58  IDYRQLNTATRKDHFPLPFMDQMLERLSGQQYYCFLDGYSGYNQIAVDPVDHEKTAF-TC 116

Query: 87  EWGIFTYCVMSYGMTNAP 34
            +G+F Y  M +G+ NAP
Sbjct: 117 PFGVFAYRKMPFGLCNAP 134



 Score = 22.3 bits (46), Expect(2) = 6e-11
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE++K+     IY I  + WV  +  V  P+KG
Sbjct: 3   KEVFKLLDAGMIYPISDSPWVSPVHVV--PKKG 33


>tr|Q946T4|Q946T4_PEA Reverse transcriptase (Fragment) OS=Pisum
           sativum PE=4 SV=1
          Length = 254

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVG-KVHSFLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +++NT T  D++PLP    +LER+ G + + FL G+SGYNQ+ + P DQ + AF T 
Sbjct: 58  IDHRRLNTATRKDHFPLPFIDQMLERLAGHEYYCFLDGYSGYNQIVVAPEDQEKTAF-TC 116

Query: 87  EWGIFTYCVMSYGMTNAP 34
            +GIF Y  M +G+ NAP
Sbjct: 117 PYGIFAYRRMPFGLCNAP 134


>tr|Q946U3|Q946U3_AVESA Reverse transcriptase (Fragment) OS=Avena
           sativa PE=4 SV=1
          Length = 254

 Score = 62.8 bits (151), Expect(2) = 8e-11
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVH-SFLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +KVN  T  D+YPLP    +LER   K H  FL G+SG++Q+ +   DQ +  F T 
Sbjct: 58  IDFRKVNKVTKKDHYPLPFIDQMLERFSKKTHFCFLDGYSGFSQIVVKQQDQEKTTF-TC 116

Query: 87  EWGIFTYCVMSYGMTNAPT 31
            +G + Y  M +G+ NAP+
Sbjct: 117 PYGTYAYRCMPFGLCNAPS 135



 Score = 27.3 bits (59), Expect(2) = 8e-11
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE++K+     IY I  ++WV ++   C P+KG
Sbjct: 3   KEVFKLMDAGIIYPIADSEWVSHV--HCVPKKG 33


>tr|Q9M0T8|Q9M0T8_ARATH Putative athila transposon protein
           OS=Arabidopsis thaliana GN=AT4g07660 PE=2 SV=1
          Length = 724

 Score = 63.2 bits (152), Expect(2) = 1e-10
 Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHS-FLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +K+N  +  D++PLP +  +LE +   +++ FL G+SG+ Q+ IHP DQ +  F T 
Sbjct: 422 IDYRKLNAASRKDHFPLPFTNQMLEGLANHLYNCFLDGYSGFFQIPIHPNDQEKTTF-TC 480

Query: 87  EWGIFTYCVMSYGMTNAPT 31
            +G F Y  M +G+ NAPT
Sbjct: 481 PYGTFAYKRMPFGLCNAPT 499



 Score = 26.2 bits (56), Expect(2) = 1e-10
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KEI K+     IY I  + WVF +   C P+KG
Sbjct: 367 KEILKLLDAGVIYPISDSTWVFPV--HCVPKKG 397


>tr|Q2QTI9|Q2QTI9_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g19480 PE=4 SV=1
          Length = 759

 Score = 63.5 bits (153), Expect(2) = 2e-10
 Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVH-SFLSGFSGYNQLTIHP*DQNRVAFATT 88
           ++ +K+N  T  D++ LP    +LER+    +  FL G+SGY+Q+ IHP DQ++  F T 
Sbjct: 139 IDYRKLNKATKKDHFSLPFIDEMLERLANHSYFCFLDGYSGYHQIPIHPDDQSKTTF-TC 197

Query: 87  EWGIFTYCVMSYGMTNAPTISKDLR 13
            +G + Y  MS+ + NAP + K L+
Sbjct: 198 PYGTYAYYRMSFRLCNAPNLDKVLQ 222



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 5/50 (10%)
 Frame = -2

Query: 421 YTHEEDL----KPT*QRSYKYNETFARRIK-EIYKVTKVEFIYEIKYTDW 287
           YTH + +     P+ +   + N      +K E+ K+  V  IY ++Y++W
Sbjct: 54  YTHRKPIVPESSPSREPQRQLNNAMREVVKKEVLKLLHVWIIYPVQYSEW 103


>tr|Q946T1|Q946T1_SORBI Reverse transcriptase (Fragment) OS=Sorghum
           bicolor PE=4 SV=1
          Length = 254

 Score = 65.5 bits (158), Expect(2) = 2e-10
 Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 264 VNLKKVNTTTIGDNYPLPMSKHVLERVVGKVHSF---LSGFSGYNQLTIHP*DQNRVAFA 94
           ++ +K+N  T  D++PLP    +LER+    HSF   L G+SGY+Q+ IHP DQ++  F 
Sbjct: 58  IDYRKLNKATRKDHFPLPFIDEMLERLAN--HSFFCFLDGYSGYHQIPIHPDDQSKTTF- 114

Query: 93  TTEWGIFTYCVMSYGMTNAP 34
           T  +G + Y  MS+G+ NAP
Sbjct: 115 TCPYGTYAYRRMSFGLCNAP 134



 Score = 23.5 bits (49), Expect(2) = 2e-10
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 346 KEIYKVTKVEFIYEIKYTDWVFYIVDVCQPQKG 248
           KE+ K+     IY + +++WV  +  V  P+KG
Sbjct: 3   KEVLKLLHAGIIYPVPHSEWVSPVQVV--PKKG 33