BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921415|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E12.
         (504 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5HV17|SYV_CAMJR Valyl-tRNA synthetase OS=Campylobacter jejun...    32   2.2  
sp|Q9PPE4|SYV_CAMJE Valyl-tRNA synthetase OS=Campylobacter jejun...    32   2.2  
sp|P12109|CO6A1_HUMAN Collagen alpha-1(VI) chain OS=Homo sapiens...    30   6.4  
sp|A2QPD9|KMO3_ASPNC Kynurenine 3-monooxygenase 3 OS=Aspergillus...    30   8.4  

>sp|Q5HV17|SYV_CAMJR Valyl-tRNA synthetase OS=Campylobacter jejuni
           (strain RM1221) GN=valS PE=3 SV=1
          Length = 870

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 82  WLSKHTPKTCSICQKPT--EDEDHEDS 156
           W S+HTPKTC  CQ     +DED  D+
Sbjct: 419 WASQHTPKTCPKCQSQNFKQDEDVLDT 445


>sp|Q9PPE4|SYV_CAMJE Valyl-tRNA synthetase OS=Campylobacter jejuni
           GN=valS PE=3 SV=1
          Length = 870

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +1

Query: 82  WLSKHTPKTCSICQKPT--EDEDHEDS 156
           W S+HTPKTC  CQ     +DED  D+
Sbjct: 419 WASQHTPKTCPKCQSQNFKQDEDVLDT 445


>sp|P12109|CO6A1_HUMAN Collagen alpha-1(VI) chain OS=Homo sapiens
            GN=COL6A1 PE=1 SV=3
          Length = 1028

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -2

Query: 335  VSNAFGVLTEGYKIVLRDLDVDRSLVFSLQQAQGVTPASLIE-----PRGPIQVFVDASG 171
            V++A G +T  Y+         R L+FS   +QG TPA++ +      R  I++FV   G
Sbjct: 916  VNDALGYVTRFYREASSGAAKKRLLLFSDGNSQGATPAAIEKAVQEAQRAGIEIFVVVVG 975

Query: 170  R 168
            R
Sbjct: 976  R 976


>sp|A2QPD9|KMO3_ASPNC Kynurenine 3-monooxygenase 3 OS=Aspergillus
           niger (strain CBS 513.88 / FGSC A1513) GN=bna4-3 PE=3
           SV=1
          Length = 499

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 16  TPSIDISYRKDSKGGQSNLHRTWLSKHTPKTCSICQKPTEDE 141
           TP++ + +     G     +R WL + TP T S  +  TE E
Sbjct: 134 TPNVKMFFNHKLTGADFRTNRAWLERRTPGTASTPESVTEIE 175

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921415|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_E12.
         (504 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8NFF1|A8NFF1_COPC7 Putative uncharacterized protein OS=Copri...    37   0.41 
tr|Q81BE5|Q81BE5_BACCR Putative uncharacterized protein OS=Bacil...    35   2.6  
tr|Q5L5R8|Q5L5R8_CHLAB Putative ABC transporter peptide periplas...    35   2.6  
tr|A8UII3|A8UII3_9FLAO Metalloendopeptidase PepO OS=Flavobacteri...    35   2.6  
tr|Q5NW97|Q5NW97_AZOSE Partitioning protein, parA OS=Azoarcus sp...    33   7.6  
tr|Q2QSD9|Q2QSD9_ORYSJ Retrotransposon protein, putative, unclas...    33   7.6  

>tr|A8NFF1|A8NFF1_COPC7 Putative uncharacterized protein
           OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC
           9003) GN=CC1G_04246 PE=4 SV=1
          Length = 656

 Score = 37.4 bits (85), Expect = 0.41
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = +1

Query: 121 QKPTEDEDHEDSQSLPRPDASTKT*IGPLGS 213
           Q+P  DED EDS + PRP  S KT  GPL S
Sbjct: 619 QQPERDEDEEDSDAFPRPLHSRKTREGPLSS 649


>tr|Q81BE5|Q81BE5_BACCR Putative uncharacterized protein OS=Bacillus
           cereus (strain ATCC 14579 / DSM 31) GN=BC_3220 PE=4 SV=1
          Length = 196

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
 Frame = +3

Query: 198 RTSRLYQGSWSDSLSLLQREYKRSIHIQV-----SEYNLISLCKNSKSI*NTYLRIGGLA 362
           R++ +++G +S    +L R+   S+H  V     +E + + + +NSK + +T L+I  LA
Sbjct: 126 RSTNIFRGGYSSFKEVLDRQQTESLHDDVVDPIENEADYLFVIRNSKDVNSTILKIVHLA 185

Query: 363 KE 368
           KE
Sbjct: 186 KE 187


>tr|Q5L5R8|Q5L5R8_CHLAB Putative ABC transporter peptide
           periplasmic-binding lipoprotein OS=Chlamydophila abortus
           GN=CAB573 PE=4 SV=1
          Length = 535

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
 Frame = +3

Query: 201 TSRLYQGSWSDSLSLLQREYKRSI------HIQVSEYNLISLCKNSKSI*NTYLRIGGLA 362
           T +L   SWS+   L   +++ SI      ++ +S +NL+ + KNSK+I    L I  L 
Sbjct: 97  TFKLRNTSWSNGDPLTAHDFEESIKQIHTKNLPISYHNLLYIIKNSKAIMEERLPIEKLG 156

Query: 363 KEIRD-----YYLERKSESIQQLMAH 425
            +  D       LE  SE+  +++AH
Sbjct: 157 VKALDEKTLEITLEHPSENFIEMVAH 182


>tr|A8UII3|A8UII3_9FLAO Metalloendopeptidase PepO
           OS=Flavobacteriales bacterium ALC-1 GN=FBALC1_00872 PE=4
           SV=1
          Length = 689

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
 Frame = +3

Query: 231 DSLSLLQREYKRSIHIQVSEYNLISLCK-NSKSI*NTYLRIGGLAKEIRDYYL---ERKS 398
           +SLS  Q  Y ++I +    YNL      N  SI   Y+  GGL    RDYY+   E+  
Sbjct: 144 NSLSDAQTVYAKTIGVGAPFYNLAIFPDINDSSIYAPYITQGGLGLPDRDYYVLQDEKSK 203

Query: 399 ESIQQLMAHAKR 434
           E  QQ + H  R
Sbjct: 204 ERRQQYVDHVTR 215


>tr|Q5NW97|Q5NW97_AZOSE Partitioning protein, parA OS=Azoarcus sp.
           (strain EbN1) GN=parA PE=4 SV=1
          Length = 422

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -2

Query: 383 IVVSNFFGKSTYPKVCVSNAFGVLTEGYKIVLRDLDVDRSL 261
           +VVSNF G ST     +S A G+   G K+++ DLD   SL
Sbjct: 144 VVVSNFKGGSTKTTTAMSLAQGLTLRGRKVLIVDLDPQASL 184


>tr|Q2QSD9|Q2QSD9_ORYSJ Retrotransposon protein, putative,
           unclassified, expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g24450 PE=4 SV=2
          Length = 1047

 Score = 33.1 bits (74), Expect = 7.6
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
 Frame = +3

Query: 267 SIHIQVSEYNLISLCKNSKSI*NTY----LRIGGLAKE-----IRDYY---------LER 392
           +++  +S++  + L  NS S+ NT+      +G L ++     +++ +         +ER
Sbjct: 700 ALNRDISDHTPLLLNTNSSSVGNTHHSFKFELGWLLRDGFVDMVKEVWSSVNEGNTPMER 759

Query: 393 KSESIQQLMAHAKRGFAKHSGNLTYPSDESSTSHSRN 503
             E I++L  H  RG+AKH+  L  P D+S    + N
Sbjct: 760 WQEKIRRLRQHL-RGWAKHTSGLFGPPDDSDLQFNEN 795