BP921420 |
Clone id |
YMU001_000149_F10 |
Library |
YMU01 |
Length |
538 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_F10. |
Accession |
BP921420 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AATCCTTCAAACATCTGATGATAAACTCACTTGGTACATGTACCTACAAATCTTAAGGTG AAGGCCCCGGGGCAAGTACTCGAGCAACAGTTAAGCATTAGACAAAACTTTTCTTCTCTT CTGCTTCAAATTATTACAAAACCACTTAAACAATTTTCACTACTGTTAAAATTTGTCTCT TTCCAGAGATTGGAGTTTTCGAGAGAGGCCACGCATGCAATCAACCAGCACTTTCTTCTT TGCAATGCGATATTCCAGAACAAGCGTTCCTGCTTCAGTTAGCTCCTTGCTTTTAAGAGC TCCCTCGTCCTCTGTTATTGGCGTAGGAAAGTGGCCTAATAGAAGTGCGCACATTGCCAC TAACGTTTTCAAAACATTGCTTTCAATAATATATCCTGAAGGAGATCCACTCCACATTTG TAGTTCAGTGATACCTTCGCGTTTCACCGAATCAGAATCTTGTGCATATAGAACCCTCAA GGCTGCCAAAAGGCGGCCATCCACAAGGTTTGTTCCTCCGAACTTGACCTGGAGGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5XIH7 |
Definition |
sp|Q5XIH7|PHB2_RAT Prohibitin-2 OS=Rattus norvegicus |
Align length |
46 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P3U5 |
Definition |
tr|A7P3U5|A7P3U5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
118 |
Score (bit) |
97.1 |
E-value |
5.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921420|Adiantum capillus-veneris mRNA, clone: YMU001_000149_F10. (538 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P3U5|A7P3U5_VITVI Chromosome chr1 scaffold_5, whole genome ... 97 5e-19 tr|Q6I655|Q6I655_CITLA SET-domain transcriptional regulator (Fra... 90 7e-17 tr|B8AI25|B8AI25_ORYSI Putative uncharacterized protein OS=Oryza... 90 9e-17 tr|Q6Z2I7|Q6Z2I7_ORYSJ Os02g0733800 protein OS=Oryza sativa subs... 89 1e-16 tr|A3AB34|A3AB34_ORYSJ Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|A9RZT2|A9RZT2_PHYPA Predicted protein OS=Physcomitrella paten... 86 9e-16 tr|Q9FYK3|Q9FYK3_ARATH F21J9.27 OS=Arabidopsis thaliana GN=At1g2... 82 1e-14 tr|Q94B58|Q94B58_ARATH Putative uncharacterized protein OS=Arabi... 82 1e-14 tr|Q8L9I6|Q8L9I6_ARATH Putative uncharacterized protein OS=Arabi... 82 1e-14 tr|B6U0H4|B6U0H4_MAIZE SET domain containing protein OS=Zea mays... 82 2e-14 tr|B4G0P5|B4G0P5_MAIZE Putative uncharacterized protein OS=Zea m... 82 2e-14 tr|Q00UP6|Q00UP6_OSTTA N-methyltransferase (ISS) OS=Ostreococcus... 61 3e-08 tr|A4S805|A4S805_OSTLU Predicted protein OS=Ostreococcus lucimar... 58 3e-07 tr|Q01C94|Q01C94_OSTTA N-methyltransferase (ISS) OS=Ostreococcus... 45 0.002 tr|A8JHE6|A8JHE6_CHLRE Predicted protein OS=Chlamydomonas reinha... 44 0.004 tr|A4RUT9|A4RUT9_OSTLU Predicted protein OS=Ostreococcus lucimar... 42 0.027 tr|Q013S2|Q013S2_OSTTA SET domain-containing protein-like (ISS) ... 37 0.66 tr|A4S159|A4S159_OSTLU Predicted protein OS=Ostreococcus lucimar... 36 1.5 tr|B1FJJ3|B1FJJ3_9BURK Alcohol dehydrogenase zinc-binding domain... 35 2.5 tr|Q6ESK6|Q6ESK6_ORYSJ cDNA, clone: J100085N23, full insert sequ... 35 2.5 tr|B8BF75|B8BF75_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.5 tr|A3BYR7|A3BYR7_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.5 tr|B5ECT6|B5ECT6_GEOBB Putative uncharacterized protein OS=Geoba... 35 3.3 tr|A4I511|A4I511_LEIIN Putative uncharacterized protein OS=Leish... 35 3.3 tr|Q393G4|Q393G4_BURS3 Zinc-containing alcohol dehydrogenase sup... 34 5.6 tr|Q1BLR6|Q1BLR6_BURCA Alcohol dehydrogenase, zinc-binding OS=Bu... 34 5.6 tr|B4EMP2|B4EMP2_BURCJ Putative zinc-binding oxidoreductase OS=B... 34 5.6 tr|B1K4F3|B1K4F3_BURCC Alcohol dehydrogenase zinc-binding domain... 34 5.6 tr|A0AYR6|A0AYR6_BURCH Alcohol dehydrogenase, zinc-binding domai... 34 5.6 tr|A2W044|A2W044_9BURK Putative uncharacterized protein OS=Burkh... 34 5.6
>tr|A7P3U5|A7P3U5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030582001 PE=4 SV=1 Length = 159
Score = 97.1 bits (240), Expect = 5e-19 Identities = 51/118 (43%), Positives = 80/118 (67%), Gaps = 1/118 (0%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSG-SPSGYIIESNVLKTLV 358 L+V GG+ LV+GRLLAALRVL A D ++V++ + L+ + +P G E L+T++ Sbjct: 33 LKVNLGGSELVEGRLLAALRVLLASDLETVQKHDLNTLKSLAAEAPLGISNEVAALRTVI 92
Query: 357 AMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 A+C + LGHFPT I EDE LK + ++ + L +++RI KK V++D MRGL+ +++ L Sbjct: 93 ALCVIALGHFPTKIMEDEALLK-QGVSGSAELAIQFRIQKKSVIIDVMRGLTSRVKLL 149
>tr|Q6I655|Q6I655_CITLA SET-domain transcriptional regulator (Fragment) OS=Citrullus lanatus PE=2 SV=1 Length = 143
Score = 90.1 bits (222), Expect = 7e-17 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 1/118 (0%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSG-SPSGYIIESNVLKTLV 358 L+V GG V GRLLA LRVL + D ++V++ ++ L+ S +P G E L+T++ Sbjct: 19 LKVSIGGXEXVAGRLLAXLRVLLSVDEETVQKHDLSVLKSLSAEAPRGVANEVAALRTVI 78
Query: 357 AMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 A+C + LGHFPT I EDE LK E E L +++R+ KK V++D M L+R+++ L Sbjct: 79 ALCVIALGHFPTKIMEDETLLKKCE-NETSKLAIQFRLQKKSVIIDVMSXLTRRVKLL 135
>tr|B8AI25|B8AI25_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08832 PE=4 SV=1 Length = 486
Score = 89.7 bits (221), Expect = 9e-17 Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 1/122 (0%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGI-TELQMWSGSPSGYIIESNVLKTLV 358 L+V GG +VDGRLLAALRV+ A D D+V + T + + +P G +E++ L+T++ Sbjct: 363 LKVSIGGPEIVDGRLLAALRVIIAADPDAVSGHDLKTLMSLKEKAPLGPAVEASALRTVL 422
Query: 357 AMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSLER 178 A+C L HF T I EDE LK +E L +++R+ KK +L+D ++ LSR+++ L Sbjct: 423 ALCTFALQHFHTKIMEDEAILK-REPPLTTELAVQFRLQKKLLLLDVIQNLSRRIKMLAL 481
Query: 177 DK 172 DK Sbjct: 482 DK 483
>tr|Q6Z2I7|Q6Z2I7_ORYSJ Os02g0733800 protein OS=Oryza sativa subsp. japonica GN=P0643A10.40 PE=2 SV=1 Length = 486
Score = 89.0 bits (219), Expect = 1e-16 Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGI-TELQMWSGSPSGYIIESNVLKTLV 358 L+V GG +VDGRLLAALRV+ A D D+V + T + + +P G +E++ L+T++ Sbjct: 363 LKVSIGGPEIVDGRLLAALRVIIAADPDAVSGHDLKTLMSLKEKAPLGPAVEASALRTVL 422
Query: 357 AMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSLER 178 A+C L HF T I EDE LK E L +++R+ KK +L+D ++ LSR+++ L Sbjct: 423 ALCTFALQHFHTKIMEDEAILKG-EPPLTTELAVQFRLQKKLLLLDVIQNLSRRIKMLAL 481
Query: 177 DK 172 DK Sbjct: 482 DK 483
>tr|A3AB34|A3AB34_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008006 PE=4 SV=1 Length = 379
Score = 89.0 bits (219), Expect = 1e-16 Identities = 50/122 (40%), Positives = 76/122 (62%), Gaps = 1/122 (0%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGI-TELQMWSGSPSGYIIESNVLKTLV 358 L+V GG +VDGRLLAALRV+ A D D+V + T + + +P G +E++ L+T++ Sbjct: 256 LKVSIGGPEIVDGRLLAALRVIIAADPDAVSGHDLKTLMSLKEKAPLGPAVEASALRTVL 315
Query: 357 AMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSLER 178 A+C L HF T I EDE LK E L +++R+ KK +L+D ++ LSR+++ L Sbjct: 316 ALCTFALQHFHTKIMEDEAILKG-EPPLTTELAVQFRLQKKLLLLDVIQNLSRRIKMLAL 374
Query: 177 DK 172 DK Sbjct: 375 DK 376
>tr|A9RZT2|A9RZT2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207281 PE=4 SV=1 Length = 340
Score = 86.3 bits (212), Expect = 9e-16 Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 1/115 (0%) Frame = -2
Query: 537 SLQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSGSPS-GYIIESNVLKTL 361 S V GGT LV+GRLLAA+RV++AQD + + LQ W+ SP G + E ++TL Sbjct: 223 SQMVTLGGTELVEGRLLAAVRVMHAQDPMELLDVDLEALQTWNQSPPLGVLNERKTIRTL 282
Query: 360 VAMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRK 196 + + L L FPT I ED+ L +++E L +++R+ KK++L+D ++GL + Sbjct: 283 IGLGMLALASFPTEIEEDQSELVKGDISENHRLAIQFRMLKKRLLLDTIKGLKAR 337
>tr|Q9FYK3|Q9FYK3_ARATH F21J9.27 OS=Arabidopsis thaliana GN=At1g24610 PE=4 SV=1 Length = 476
Score = 82.4 bits (202), Expect = 1e-14 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%) Frame = -2
Query: 537 SLQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSG-SPSGYIIESNVLKTL 361 +L+V GG V+GRLLAALR+L + V++ L+ S +P G E V +T+ Sbjct: 350 NLKVTIGGPEPVEGRLLAALRILLCGELVEVEKHDSDTLKSLSAVAPFGIANEIAVFRTV 409
Query: 360 VAMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 +A+C + L HFPT I EDE +K + ++ L ++YRI KK V++D M+ L+R+++ L Sbjct: 410 IALCVIALSHFPTKIMEDEAIIK-QGVSATAELSIKYRIQKKSVIIDVMKDLTRRVKLL 467
>tr|Q94B58|Q94B58_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 364
Score = 82.4 bits (202), Expect = 1e-14 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%) Frame = -2
Query: 537 SLQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSG-SPSGYIIESNVLKTL 361 +L+V GG V+GRLLAALR+L + V++ L+ S +P G E V +T+ Sbjct: 238 NLKVTIGGPEPVEGRLLAALRILLCGELVEVEKHDSDTLKSLSAVAPFGIANEIAVFRTV 297
Query: 360 VAMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 +A+C + L HFPT I EDE +K + ++ L ++YRI KK V++D M+ L+R+++ L Sbjct: 298 IALCVIALSHFPTKIMEDEAIIK-QGVSATAELSIKYRIQKKSVIIDVMKDLTRRVKLL 355
>tr|Q8L9I6|Q8L9I6_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 471
Score = 82.4 bits (202), Expect = 1e-14 Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 1/119 (0%) Frame = -2
Query: 537 SLQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSG-SPSGYIIESNVLKTL 361 +L+V GG V+GRLLAALR+L + V++ L+ S +P G E V +T+ Sbjct: 345 NLKVTIGGPEPVEGRLLAALRILLCGELVEVEKHDSDTLKSLSAVAPFGIANEIAVFRTV 404
Query: 360 VAMCALLLGHFPTPITEDEGALKSKELTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 +A+C + L HFPT I EDE +K + ++ L ++YRI KK V++D M+ L+R+++ L Sbjct: 405 IALCVIALSHFPTKIMEDEAIIK-QGVSATAELSIKYRIQKKSVIIDVMKDLTRRVKLL 462
>tr|B6U0H4|B6U0H4_MAIZE SET domain containing protein OS=Zea mays PE=2 SV=1 Length = 491
Score = 82.0 bits (201), Expect = 2e-14 Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 3/124 (2%) Frame = -2
Query: 534 LQVKFGGTNLVDGRLLAALRVLYAQDSDSVKREGITELQMWSGS-PSGYIIESNVLKTLV 358 L+V GG ++VDGRLLAALRVL A D ++V + + L P G +E++ L+T++ Sbjct: 368 LKVSLGGPDVVDGRLLAALRVLLADDPEAVHKHDLNTLMSLDVQVPLGPTVEASALRTVL 427
Query: 357 AMCALLLGHFPTPITEDEGALKSKE--LTEAGTLVLEYRIAKKKVLVDCMRGLSRKLQSL 184 A+CA+ L HF T I +D+ L +T+ L +++R+ KK +VD M+ +SR+++ L Sbjct: 428 ALCAIALQHFHTKIMDDQAILGGGPPLITQ---LAVQFRLQKKFTIVDVMQNISRRIKML 484
Query: 183 ERDK 172 K Sbjct: 485 SPQK 488
|