| BP921429 |
| Clone id |
YMU001_000149_G09 |
| Library |
YMU01 |
| Length |
587 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_G09. |
| Accession |
BP921429 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GTTAGGGCAGTTGAGGGCCTTAATGGCAAGACAATAGATGAAAAAGAGTGGTATGTATGT
CGAGCGCAAAAGAAGTCAGAGAGGGAACTGGCACTTAAAGAACAACATGAGCTTATTGCA
CGAGACAGGCTGGAAAAGCTGAAAGATGTCAATGTCTATGTTAAACACTTGGACAGTACT
GTTGATGAAAGGACATTGAAGGAGTGGTTCTCAGCTCATGGACACGTTGTTTCAACTAAG
ATAATTAAAACTCCTGAGGGGAATAGTAGAGGTATTGGGTTTGTGACGTATTCTTCACCA
GAAGAAGCCAGAAAGCTATAGCAGAGATGAATGGGGTGAAGCTTGGGAGCAAAGCTTTAT
TTGTTGCCAAGGCGCAACGGAAGGATGATAGGCAGGTTAGAGATGGAATTGTGAGCGGAC
CACGTATCGGCCCCCCTCCTATGTACCATCCTGGAGCTGTACTGGGCCAACAGTTTTTTT
ATGGCCCGCCGCTCCCTGGGTTGATGCCGCAACAGGCAAACGGGTTCAATTATCAGCAGC
CTGTGATGCCTGGTATGGGGACTGGAGGAATACACTTGCCAAATTAC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P42731 |
| Definition |
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana |
| Align length |
102 |
| Score (bit) |
108.0 |
| E-value |
9.0e-39 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921429|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_G09.
(587 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabido... 108 9e-39
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ... 95 7e-25
sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic ... 94 2e-24
sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic ... 94 4e-24
sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic ... 99 6e-24
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no... 93 2e-23
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a... 93 2e-23
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus... 93 2e-23
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa... 93 2e-23
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau... 93 2e-23
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 91 2e-23
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ... 89 4e-23
sp|Q6FKG4|PABP_CANGA Polyadenylate-binding protein, cytoplasmic ... 94 4e-23
sp|Q9H361|PABP3_HUMAN Polyadenylate-binding protein 3 OS=Homo sa... 92 5e-23
sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic ... 93 5e-23
sp|Q6GR16|EPABB_XENLA Embryonic polyadenylate-binding protein B ... 92 6e-23
sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Ho... 91 6e-23
sp|Q6IP09|PABPB_XENLA Polyadenylate-binding protein 1-B OS=Xenop... 90 1e-22
sp|P21187|PABP_DROME Polyadenylate-binding protein OS=Drosophila... 89 1e-22
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido... 105 2e-22
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ... 93 2e-22
sp|Q6DEY7|EPAB_XENTR Embryonic polyadenylate-binding protein OS=... 91 2e-22
sp|P20965|PABPA_XENLA Polyadenylate-binding protein 1-A OS=Xenop... 89 3e-22
sp|Q98SP8|EPABA_XENLA Embryonic polyadenylate-binding protein A ... 89 7e-22
sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic ... 93 9e-22
sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic ... 102 2e-21
sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic ... 73 4e-21
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido... 100 5e-21
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ... 87 1e-20
sp|Q13310|PABP4_HUMAN Polyadenylate-binding protein 4 OS=Homo sa... 95 2e-19
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2
OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1
Length = 629
Score = 108 bits (269), Expect(2) = 9e-39
Identities = 51/102 (50%), Positives = 72/102 (70%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RAVE LNG D+KEWYV RAQKKSERE L+ ++E ++ +K + N+YVK+LD ++
Sbjct: 270 RAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSI 329
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
+ LKE FS G V S+K+++ P G S+G GFV +++PEEA
Sbjct: 330 SDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEA 371
Score = 71.6 bits (174), Expect(2) = 9e-39
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 10/102 (9%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYHPGAV- 461
+A+++++G + SK L+VA AQRK+DR+VR + P +GP P+Y PG
Sbjct: 373 EAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPG 432
Query: 462 LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
+GQQ FYG P ++P Q G+ YQQ ++PGM GG +P++
Sbjct: 433 IGQQMFYGQAPPAMIPPQP-GYGYQQQLVPGMRPGGGPVPSF 473
Score = 59.3 bits (142), Expect(2) = 4e-11
Identities = 32/104 (30%), Positives = 54/104 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+A+E LNG +++K+ YV ++ ER+ K K NVYVK+L +
Sbjct: 179 KAIEKLNGMLLNDKQVYVGPFLRRQERD------------STANKTKFTNVYVKNLAEST 226
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ LK F +G + S ++K EG S+G GFV + + ++A +
Sbjct: 227 TDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAAR 270
Score = 27.3 bits (59), Expect(2) = 4e-11
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
+A+ +NG K K +V +AQ+K +R+
Sbjct: 270 RAVESLNGHKFDDKEWYVGRAQKKSERE 297
Score = 55.1 bits (131), Expect(2) = 1e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FS+ G++VS K+ G S+G GFV Y++ E A+K
Sbjct: 125 NIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQK 179
Score = 26.6 bits (57), Expect(2) = 1e-09
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDR 392
+QKAI ++NG+ L K ++V R+ +R
Sbjct: 177 AQKAIEKLNGMLLNDKQVYVGPFLRRQER 205
Score = 30.0 bits (66), Expect = 8.9
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQ 105
A+ L+GK I+ K YV AQ+K +R + L+ Q
Sbjct: 374 AMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQ 406
>sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1
Length = 629
Score = 94.7 bits (234), Expect(2) = 7e-25
Identities = 48/105 (45%), Positives = 70/105 (66%)
Frame = +1
Query: 1 VRAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDST 180
V+AVE LN K I+ ++ YV RAQKK ER LK+Q+E + ++L K + VN++VK+LD T
Sbjct: 287 VKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDT 346
Query: 181 VDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+D L+E F G + S K++ G S+G GFV +++PEEA K
Sbjct: 347 IDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATK 391
Score = 38.5 bits (88), Expect(2) = 7e-25
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR--QVRDGIVSGPRI--------GPPPMYHPGAV 461
KAI EMN + K L+VA AQRKD R Q+ I + ++ G P + P
Sbjct: 391 KAITEMNTRMINGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAGGLPGQFIPPMF 450
Query: 462 LGQQFFYGP------PLPGLMPQ 512
GQQ F+ P P PG PQ
Sbjct: 451 YGQQGFFPPNGRGNAPYPGPNPQ 473
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 31/103 (30%), Positives = 52/103 (50%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A+E +NG ++++E +V + K +RE +E K N+YVK++D
Sbjct: 196 AIENVNGMLLNDREVFVGKHISKKDRESKFEEM----------KANFTNIYVKNIDLNYS 245
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
E + ++ FS G + S + K +G S+G GFV + E A K
Sbjct: 246 EESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVK 288
Score = 26.2 bits (56), Expect(2) = 3e-10
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR 392
KA+ E+N ++ + ++V +AQ+K +R
Sbjct: 288 KAVEELNDKEINGQKIYVGRAQKKRER 314
Score = 44.7 bits (104), Expect(2) = 4e-06
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 145 DVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
D N+++K+L +D + L + FSA G ++S K+ G S+ GFV Y + E A
Sbjct: 139 DGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAA 193
Score = 25.0 bits (53), Expect(2) = 4e-06
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
++ AI +NG+ L + +FV K K DR+
Sbjct: 193 AEAAIENVNGMLLNDREVFVGKHISKKDRE 222
>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1
Length = 661
Score = 93.6 bits (231), Expect(2) = 2e-24
Identities = 47/104 (45%), Positives = 69/104 (66%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AVE LN K I+ ++ YV RAQKK ER LK+Q+E + ++L K + VN++VK+LD +
Sbjct: 303 KAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQI 362
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D L+E F G + S+K++ G S+G GFV +S+PEEA K
Sbjct: 363 DSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATK 406
Score = 38.5 bits (88), Expect(2) = 2e-24
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 17/84 (20%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR--QVRDGIVSGPRI---------GPPPMYHPGA 458
KAI EMN + K L+VA AQRKD R Q+ I + ++ G P + P
Sbjct: 406 KAITEMNQRMVNGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAAAGGLPGQFMPPM 465
Query: 459 VLGQQFFYGP------PLPGLMPQ 512
GQQ F+ P P PG PQ
Sbjct: 466 FYGQQGFFPPNGRGNAPFPGPNPQ 489
Score = 62.4 bits (150), Expect(2) = 1e-11
Identities = 34/103 (33%), Positives = 53/103 (51%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A+E +NG ++++E YV + K +RE L+E K N+YVK++D
Sbjct: 211 AIESVNGMLLNDREVYVGKHVSKKDRESKLEEM----------KANYTNIYVKNIDLAYT 260
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
E+ +E F+ G + S + K EG S+G GFV + E A K
Sbjct: 261 EKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAK 303
Score = 26.2 bits (56), Expect(2) = 1e-11
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR 392
KA+ E+N ++ + ++V +AQ+K +R
Sbjct: 303 KAVEELNDKEINGQKIYVGRAQKKRER 329
Score = 45.4 bits (106), Expect(2) = 2e-06
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 145 DVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEAR 312
D N+++K+L +D + L + FSA G ++S K+ G S+ GFV Y + E A+
Sbjct: 154 DGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQ 209
Score = 25.4 bits (54), Expect(2) = 2e-06
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
+Q AI +NG+ L + ++V K K DR+
Sbjct: 208 AQAAIESVNGMLLNDREVYVGKHVSKKDRE 237
>sp|A3LXL0|PABP_PICST Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1
Length = 632
Score = 94.0 bits (232), Expect(2) = 4e-24
Identities = 48/105 (45%), Positives = 69/105 (65%)
Frame = +1
Query: 1 VRAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDST 180
V+AVE LN K I+ ++ YV RAQKK ER LK+Q+E ++L K + VN+++K+LD T
Sbjct: 287 VKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDT 346
Query: 181 VDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+D L+E F G + S +++ G S+G GFV +SSPEEA K
Sbjct: 347 IDSEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATK 391
Score = 36.6 bits (83), Expect(2) = 4e-24
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 17/84 (20%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR--QVRDGIVSGPRI---------GPPPMYHPGA 458
KAI EMN K L+VA AQRKD R Q+ I + ++ G P + P
Sbjct: 391 KAITEMNQRMFFGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAATGGIPGQFIPPM 450
Query: 459 VLGQQFFYGP------PLPGLMPQ 512
GQQ F+ P P PG PQ
Sbjct: 451 FYGQQGFFPPNGRGNAPFPGPNPQ 474
Score = 60.1 bits (144), Expect(2) = 6e-11
Identities = 34/103 (33%), Positives = 53/103 (51%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A+E +NG ++++E +V + K +RE +E K N+YVK++D
Sbjct: 196 AIENVNGMLLNDREVFVGKHISKKDRESKFEEI----------KANFTNIYVKNIDLEYS 245
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
E LK+ F+ +G + S + K EG S+G GFV Y E A K
Sbjct: 246 EEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVK 288
Score = 26.2 bits (56), Expect(2) = 6e-11
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR 392
KA+ E+N ++ + ++V +AQ+K +R
Sbjct: 288 KAVEELNDKEINGQKIYVGRAQKKRER 314
>sp|P04147|PABP_YEAST Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4
Length = 577
Score = 99.0 bits (245), Expect(2) = 6e-24
Identities = 47/105 (44%), Positives = 74/105 (70%)
Frame = +1
Query: 1 VRAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDST 180
V+AVE LN ++ ++ YV RAQKK+ER LK+Q+E +++ K + VN++VK+LD +
Sbjct: 273 VKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDS 332
Query: 181 VDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
VD+ L+E F+ +G + S K+++T G S+G GFV +S+PEEA K
Sbjct: 333 VDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATK 377
Score = 31.2 bits (69), Expect(2) = 6e-24
Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 16/86 (18%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDR----------------QVRDGIVSGPRIGPPPM 443
KAI E N + K L+VA AQRKD R Q + G P
Sbjct: 377 KAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARNQMRYQQATAAAAAAAAGMPGQ 436
Query: 444 YHPGAVLGQQFFYGPPLPGLMPQQAN 521
+ P G G P G PQQ N
Sbjct: 437 FMPPMFYGVMPPRGVPFNGPNPQQMN 462
Score = 57.4 bits (137), Expect = 5e-08
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG ++ +E YV + ER+ L+E K N+YVK+++S
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEE----------TKAHYTNLYVKNINSETT 231
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SL-GAKLYL 363
+ +E F+ G +VS + K +G +G GFV Y E+A K + L G KLY+
Sbjct: 232 DEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 291
Query: 364 --LPRRNGRM 387
++N RM
Sbjct: 292 GRAQKKNERM 301
Score = 45.1 bits (105), Expect = 3e-04
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 130 LEKLKDVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
L K N+++K+L +D + L + FS G ++S+KI G S+G GFV + A
Sbjct: 120 LRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAA 179
Query: 310 RKL*QR*MG*SL-GAKLYLLP 369
++ G L G ++Y+ P
Sbjct: 180 KEAIDALNGMLLNGQEIYVAP 200
>sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus
norvegicus GN=Pabpc1 PE=2 SV=1
Length = 636
Score = 93.2 bits (230), Expect(2) = 2e-23
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ +NGK ++ K+ YV RAQKK ER+ LK + E + +DR+ + + VN+YVK+LD +
Sbjct: 246 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L++ FS G + S K++ G S+G GFV +SSPEEA K
Sbjct: 306 DDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATK 348
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ EMNG + +K L+VA AQRK++RQ
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQ 375
Score = 63.9 bits (154), Expect = 6e-10
Identities = 40/135 (29%), Positives = 70/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RA+E +NG +++++ +V R + + ERE EL AR + + NVY+K+ +
Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA------ELGARAK----EFTNVYIKNFGEDM 202
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
D+ LKE F G +S K++ G S+G GFV++ E+A+K G L K
Sbjct: 203 DDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
Query: 364 LPRRNGRMIGRLEME 408
+ R ++ + E++
Sbjct: 263 VGRAQKKVERQTELK 277
Score = 47.8 bits (112), Expect = 4e-05
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FSA G+++S K++ E S+G GFV + + E A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAER 153
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQH 108
+AV +NG+ + K YV AQ+K ER+ L Q+
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
>sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo
abelii GN=PABPC1 PE=2 SV=1
Length = 636
Score = 93.2 bits (230), Expect(2) = 2e-23
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ +NGK ++ K+ YV RAQKK ER+ LK + E + +DR+ + + VN+YVK+LD +
Sbjct: 246 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L++ FS G + S K++ G S+G GFV +SSPEEA K
Sbjct: 306 DDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATK 348
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ EMNG + +K L+VA AQRK++RQ
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQ 375
Score = 62.8 bits (151), Expect = 1e-09
Identities = 39/135 (28%), Positives = 70/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RA+E +NG +++++ +V R + + ERE EL AR + + NVY+K+ +
Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA------ELGARAK----EFTNVYIKNFGEDM 202
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
D+ LK+ F G +S K++ G S+G GFV++ E+A+K G L K
Sbjct: 203 DDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
Query: 364 LPRRNGRMIGRLEME 408
+ R ++ + E++
Sbjct: 263 VGRAQKKVERQTELK 277
Score = 47.8 bits (112), Expect = 4e-05
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FSA G+++S K++ E S+G GFV + + E A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAER 153
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQH 108
+AV +NG+ + K YV AQ+K ER+ L Q+
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
>sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus
musculus GN=Pabpc1 PE=1 SV=1
Length = 636
Score = 93.2 bits (230), Expect(2) = 2e-23
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ +NGK ++ K+ YV RAQKK ER+ LK + E + +DR+ + + VN+YVK+LD +
Sbjct: 246 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L++ FS G + S K++ G S+G GFV +SSPEEA K
Sbjct: 306 DDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATK 348
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ EMNG + +K L+VA AQRK++RQ
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQ 375
Score = 63.5 bits (153), Expect = 7e-10
Identities = 40/135 (29%), Positives = 70/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RA+E +NG +++++ +V R + + ERE EL AR + + NVY+K+ +
Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSQKEREA------ELGARAK----EFTNVYIKNFGEDM 202
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
D+ LKE F G +S K++ G S+G GFV++ E+A+K G L K
Sbjct: 203 DDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
Query: 364 LPRRNGRMIGRLEME 408
+ R ++ + E++
Sbjct: 263 VGRAQKKVERQTELK 277
Score = 47.8 bits (112), Expect = 4e-05
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FSA G+++S K++ E S+G GFV + + E A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAER 153
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQH 108
+AV +NG+ + K YV AQ+K ER+ L Q+
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
>sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo
sapiens GN=PABPC1 PE=1 SV=2
Length = 636
Score = 93.2 bits (230), Expect(2) = 2e-23
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ +NGK ++ K+ YV RAQKK ER+ LK + E + +DR+ + + VN+YVK+LD +
Sbjct: 246 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L++ FS G + S K++ G S+G GFV +SSPEEA K
Sbjct: 306 DDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATK 348
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ EMNG + +K L+VA AQRK++RQ
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQ 375
Score = 62.8 bits (151), Expect = 1e-09
Identities = 39/135 (28%), Positives = 70/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RA+E +NG +++++ +V R + + ERE EL AR + + NVY+K+ +
Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA------ELGARAK----EFTNVYIKNFGEDM 202
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
D+ LK+ F G +S K++ G S+G GFV++ E+A+K G L K
Sbjct: 203 DDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
Query: 364 LPRRNGRMIGRLEME 408
+ R ++ + E++
Sbjct: 263 VGRAQKKVERQTELK 277
Score = 47.8 bits (112), Expect = 4e-05
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FSA G+++S K++ E S+G GFV + + E A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAER 153
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQH 108
+AV +NG+ + K YV AQ+K ER+ L Q+
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
>sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos taurus
GN=PABPC1 PE=2 SV=1
Length = 636
Score = 93.2 bits (230), Expect(2) = 2e-23
Identities = 47/104 (45%), Positives = 71/104 (68%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ +NGK ++ K+ YV RAQKK ER+ LK + E + +DR+ + + VN+YVK+LD +
Sbjct: 246 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 305
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L++ FS G + S K++ G S+G GFV +SSPEEA K
Sbjct: 306 DDERLRKEFSPFGTITSAKVM-MEGGRSKGFGFVCFSSPEEATK 348
Score = 35.4 bits (80), Expect(2) = 2e-23
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ EMNG + +K L+VA AQRK++RQ
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQ 375
Score = 62.8 bits (151), Expect = 1e-09
Identities = 39/135 (28%), Positives = 70/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RA+E +NG +++++ +V R + + ERE EL AR + + NVY+K+ +
Sbjct: 153 RAIEKMNGMLLNDRKVFVGRFKSRKEREA------ELGARAK----EFTNVYIKNFGEDM 202
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
D+ LK+ F G +S K++ G S+G GFV++ E+A+K G L K
Sbjct: 203 DDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIY 262
Query: 364 LPRRNGRMIGRLEME 408
+ R ++ + E++
Sbjct: 263 VGRAQKKVERQTELK 277
Score = 47.8 bits (112), Expect = 4e-05
Identities = 20/55 (36%), Positives = 37/55 (67%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD ++D + L + FSA G+++S K++ E S+G GFV + + E A +
Sbjct: 100 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVV-CDENGSKGYGFVHFETQEAAER 153
Score = 30.8 bits (68), Expect = 5.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQH 108
+AV +NG+ + K YV AQ+K ER+ L Q+
Sbjct: 348 KAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9AT32 |
| Definition |
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota |
| Align length |
104 |
| Score (bit) |
119.0 |
| E-value |
6.0e-43 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921429|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_G09.
(587 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota ... 119 6e-43
tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment) OS=Nic... 114 2e-41
tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana taba... 110 3e-41
tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Popul... 105 1e-40
tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromos... 107 4e-40
tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subs... 102 5e-40
tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza... 102 5e-40
tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subs... 104 7e-39
tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza... 104 7e-39
tr|Q9FXA2|Q9FXA2_ARATH Putative Poly-A Binding Protein OS=Arabid... 107 1e-38
tr|B6U4M0|B6U4M0_MAIZE Polyadenylate-binding protein 2 OS=Zea ma... 104 3e-38
tr|A7PLE6|A7PLE6_VITVI Chromosome chr7 scaffold_20, whole genome... 105 3e-38
tr|A9TPK9|A9TPK9_PHYPA Predicted protein OS=Physcomitrella paten... 118 4e-38
tr|Q7X675|Q7X675_ORYSA OSJNBa0014K14.19 protein OS=Oryza sativa ... 98 1e-37
tr|A5BR81|A5BR81_VITVI Putative uncharacterized protein (Chromos... 107 1e-37
tr|P93616|P93616_WHEAT Poly(A)-binding protein OS=Triticum aesti... 102 1e-37
tr|Q8RXR5|Q8RXR5_ARATH Putative poly(A)-binding protein (Fragmen... 108 1e-37
tr|Q00M91|Q00M91_SOYBN Poly(A)-binding protein OS=Glycine max PE... 108 3e-36
tr|A9S663|A9S663_PHYPA Predicted protein OS=Physcomitrella paten... 113 2e-33
tr|Q9XGW3|Q9XGW3_ORYSA Poly(A)-binding protein (Fragment) OS=Ory... 101 2e-31
tr|A9SVZ7|A9SVZ7_PHYPA Predicted protein OS=Physcomitrella paten... 125 1e-27
tr|A3AVD4|A3AVD4_ORYSJ Putative uncharacterized protein OS=Oryza... 98 8e-27
tr|A9TLC5|A9TLC5_PHYPA Predicted protein OS=Physcomitrella paten... 122 1e-26
tr|Q39953|Q39953_ANEPH Poly(A)-mRNA binding protein OS=Anemia ph... 121 3e-26
tr|B7QI53|B7QI53_IXOSC Apoptosis-promoting RNA-binding protein T... 98 4e-25
tr|Q9U302|Q9U302_CAEEL Protein Y106G6H.2a, confirmed by transcri... 97 7e-25
tr|Q7K797|Q7K797_CAEEL Protein Y106G6H.2c, confirmed by transcri... 97 7e-25
tr|Q7K798|Q7K798_CAEEL Protein Y106G6H.2b, partially confirmed b... 97 7e-25
tr|Q17350|Q17350_CAEEL Polyadenylate-binding protein OS=Caenorha... 97 1e-24
tr|Q9M549|Q9M549_CUCSA Poly(A)-binding protein OS=Cucumis sativu... 114 5e-24
>tr|Q9AT32|Q9AT32_DAUCA Poly(A)-binding protein OS=Daucus carota
PE=2 SV=1
Length = 658
Score = 119 bits (297), Expect(2) = 6e-43
Identities = 54/104 (51%), Positives = 78/104 (75%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ LNGK D+KEWYV +AQKKSERE+ LK + E +++++K + VN+YVK+LD T+
Sbjct: 274 KAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLDDTI 333
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ LKE FS +G + S K+++ P G SRG GFV +S+PEEA +
Sbjct: 334 DDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASR 377
Score = 78.6 bits (192), Expect(2) = 6e-43
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGPP-PMYHPGA 458
+ +A+ EMNG + SK L+VA AQRK++R+ R + P +GP PMY PGA
Sbjct: 375 ASRALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMPPSMGPRMPMYSPGA 434
Query: 459 V-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
+GQQ FYG P ++ QA GF YQQ ++PGM GG +PN+
Sbjct: 435 PGMGQQLFYGQAPPAMIAPQA-GFGYQQQLVPGMRPGGGPMPNF 477
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 30/103 (29%), Positives = 55/103 (53%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG +++K+ YV +K +R+ + K K N+YVK+L +
Sbjct: 184 AIDKLNGMLMNDKQVYVGVFLRKQDRD------------SEMSKTKFNNIYVKNLSDSTS 231
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
E L++ F +G + S +++ +G S+ GFV + +PE+A K
Sbjct: 232 EDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPEDAAK 274
Score = 30.8 bits (68), Expect(2) = 1e-10
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQV 398
KA+ +NG K K +V KAQ+K +R+V
Sbjct: 274 KAVDALNGKKFDDKEWYVGKAQKKSEREV 302
Score = 52.8 bits (125), Expect = 1e-05
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEAR 312
N+++K+LD ++D + L E FS+ G ++S KI G S+G GFV Y S E A+
Sbjct: 129 NIFIKNLDKSIDIKALHETFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQ 182
Score = 37.0 bits (84), Expect = 0.82
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIK-TPEGNSRGIGFVTYSSPEEARK 315
++YV LD +V + L + F+ G VVS ++ + G S G G+V YS+ ++A +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATR 96
>tr|Q9M6E4|Q9M6E4_TOBAC Poly(A)-binding protein (Fragment)
OS=Nicotiana tabacum GN=PABP PE=2 SV=1
Length = 479
Score = 114 bits (285), Expect(2) = 2e-41
Identities = 54/104 (51%), Positives = 75/104 (72%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AVE LNGK D+KEWYV +AQKKSERE LK + E A++ ++K + +N+YVK+LD T+
Sbjct: 94 KAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTI 153
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ LKE FS G + S K+++ P G SRG GFV +S+ EEA +
Sbjct: 154 DDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASR 197
Score = 78.2 bits (191), Expect(2) = 2e-41
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Frame = +3
Query: 297 TRRSQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYH 449
+ + +A++EMNG + SK L+VA AQRK++R+ + + P + P P+Y
Sbjct: 192 SEEASRALSEMNGKMIVSKPLYVALAQRKEERRAKLRAQFSQLRPVAMPPSLAPRMPIYP 251
Query: 450 PGAV-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
PGA +GQQ FYG P ++P QA GF YQQ ++PGM GG +PN+
Sbjct: 252 PGAPGIGQQLFYGQGPPAMIPPQA-GFGYQQQLVPGMRPGGAPMPNF 297
Score = 53.1 bits (126), Expect(2) = 6e-09
Identities = 30/103 (29%), Positives = 52/103 (50%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG +++K+ YV +K ERE K NVYVK+L +
Sbjct: 4 AIDKLNGMLMNDKQVYVGHFLRKQERE------------STTGMTKFQNVYVKNLSESTT 51
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ LK+ F G++ S +++ +G S+ GF+ + + E+A K
Sbjct: 52 DDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAK 94
Score = 30.0 bits (66), Expect(2) = 6e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
KA+ +NG K K +V KAQ+K +R+
Sbjct: 94 KAVESLNGKKFDDKEWYVGKAQKKSERE 121
>tr|Q9M6E6|Q9M6E6_TOBAC Poly(A)-binding protein OS=Nicotiana tabacum
GN=PABP PE=2 SV=1
Length = 649
Score = 110 bits (276), Expect(2) = 3e-41
Identities = 50/104 (48%), Positives = 76/104 (73%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RAVE LNG +D K+W+V RAQKKSERE+ LK + E A++ ++K + +N+Y+K+LD ++
Sbjct: 261 RAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIKNLDDSI 320
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ LKE FS +G + S K+++ P G S+G GFV +S+PEEA +
Sbjct: 321 SDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASR 364
Score = 80.9 bits (198), Expect(2) = 3e-41
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 10/104 (9%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYHPGA 458
+ +A++EMNG + SK L+VA AQRK++R+ R I + P PMY PG
Sbjct: 362 ASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMPMYPPGG 421
Query: 459 V-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
LGQQ FYG P P ++P QA GF YQQ ++PGM GG +PN+
Sbjct: 422 PGLGQQIFYGQPQPAMLPPQA-GFGYQQQLVPGMRPGGGPMPNF 464
Score = 55.1 bits (131), Expect(2) = 8e-09
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
N+++K+LD +D + L + FSA G+++S K+ G S+G GFV Y S E A+K
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQK 170
Score = 27.7 bits (60), Expect(2) = 8e-09
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQV 398
+QKAI ++NG+ L K ++V RK +R +
Sbjct: 168 AQKAIEKLNGMLLNDKQVYVGPFVRKHERDM 198
Score = 60.5 bits (145), Expect = 7e-08
Identities = 37/135 (27%), Positives = 69/135 (51%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+A+E LNG +++K+ YV +K ER++A ++K + NV+VK+L +
Sbjct: 170 KAIEKLNGMLLNDKQVYVGPFVRKHERDMA------------VDKTRFTNVFVKNLSEST 217
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYL 363
E L++ F G + S ++K +G SR GFV + + E+A + + G L K +
Sbjct: 218 LEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWF 277
Query: 364 LPRRNGRMIGRLEME 408
+ R + +E++
Sbjct: 278 VGRAQKKSEREMELK 292
Score = 34.7 bits (78), Expect = 4.1
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIK-TPEGNSRGIGFVTYSSPEEARK 315
++YV LD V + L + F+ G VVS ++ + S G G+V Y +P++A +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAAR 83
>tr|A9PEX9|A9PEX9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 408
Score = 105 bits (262), Expect(2) = 1e-40
Identities = 47/104 (45%), Positives = 72/104 (69%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+A E LNGK D+KEW+V +AQKK ERE+ LK++ E ++ +K + N+Y+K+LD ++
Sbjct: 24 KAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLDDSI 83
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ +KE FS G + S K+++ P G SRG GFV +S+PEEA +
Sbjct: 84 GDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASR 127
Score = 84.7 bits (208), Expect(2) = 1e-40
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGPPPMYHP-GA 458
+ +A+ EMNG + SK L+VA AQRK+DR+ R + P +G PMY P G
Sbjct: 125 ASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVGRMPMYPPTGP 184
Query: 459 VLGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
LGQQ FYG P +MP Q GF YQQ ++PGM GG +PN+
Sbjct: 185 GLGQQIFYGQGPPAIMPPQP-GFGYQQQLVPGMRPGGAPMPNF 226
>tr|A5B5N0|A5B5N0_VITVI Putative uncharacterized protein (Chromosome
chr18 scaffold_1, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00014861001 PE=4 SV=1
Length = 640
Score = 107 bits (266), Expect(2) = 4e-40
Identities = 52/103 (50%), Positives = 72/103 (69%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
AVE LNGK DEKEWYV +AQKK EREL LK + E ++ ++K + VN+Y+K+LD ++
Sbjct: 253 AVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLDDSIG 312
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ LKE FS G + S K+++ P G SRG GFV +S+ EEA +
Sbjct: 313 DDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASR 355
Score = 81.3 bits (199), Expect(2) = 4e-40
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Frame = +3
Query: 297 TRRSQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYH 449
+ + +A+ EMNG + SK L+VA AQRK++R+ R + P + P PMY
Sbjct: 350 SEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPMYP 409
Query: 450 PGAV-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
PGA LGQQ FYG P ++P QA GF YQQ ++PGM GG +PN+
Sbjct: 410 PGAPGLGQQLFYGQGPPAIIPPQA-GFGYQQQLVPGMRPGGAPMPNF 455
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 34/101 (33%), Positives = 53/101 (52%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG I++K+ YV + +K ERE A L K K NVYVK+L +
Sbjct: 162 AIDKLNGMLINDKQVYVGQFLRKQERETA------------LNKTKFNNVYVKNLSESTT 209
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
E LK F G + S +++ +G S+ GFV + + ++A
Sbjct: 210 EEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENADDA 250
Score = 27.3 bits (59), Expect(2) = 1e-09
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQV 398
+A+ +NG K K +V KAQ+K +R++
Sbjct: 252 EAVEALNGKKFDEKEWYVGKAQKKYEREL 280
Score = 55.8 bits (133), Expect = 2e-06
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +1
Query: 130 LEKLKDVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
+ K N+++K+LD ++D + L + FSA G+++S KI P G S+G GFV + + E A
Sbjct: 100 IRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGYGFVQFDNEESA 159
Query: 310 R 312
+
Sbjct: 160 Q 160
Score = 33.5 bits (75), Expect = 9.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKT-PEGNSRGIGFVTYSSPEEARK 315
++YV LD + + L + F G V+S ++ + S G G+V YS+P++A +
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAAR 74
>tr|Q7F8Y1|Q7F8Y1_ORYSJ Os04g0504800 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0116K07.11 PE=2 SV=1
Length = 659
Score = 102 bits (255), Expect(2) = 5e-40
Identities = 51/102 (50%), Positives = 72/102 (70%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RAVE LNGK I++KEWYV RAQKKSERE+ LK + E +D +K + +N+Y+K+LD ++
Sbjct: 273 RAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSI 332
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
+ L E FS +G + S KI++ G S+G GFV +S+ EEA
Sbjct: 333 GDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEA 374
Score = 85.1 bits (209), Expect(2) = 5e-40
Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Frame = +3
Query: 291 FFTRR-SQKAIAEMNGVKLGSKALFVAKAQRKDDR---------QVRDGIVSGPRIGPP- 437
F TR + +A+ EMNG + K L+VA AQRK+DR QVR + P + P
Sbjct: 368 FSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQVRP-VPMTPSMAPRL 426
Query: 438 PMYHPGAVLGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
PMY P A LGQQ FYG P +MP Q GF +QQ ++PGM GG H+PNY
Sbjct: 427 PMYPPMAPLGQQLFYGQAPPAIMPPQP-GFGFQQQLVPGMRPGGAHMPNY 475
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/134 (27%), Positives = 68/134 (50%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG I++K YV +K ERE + ++K K NV+VK+L +
Sbjct: 183 AIKSLNGMLINDKPVYVGPFLRKQERE------------NSVDKTKFNNVFVKNLSESTT 230
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYLL 366
+ L + F A+G++ S I+ +G SR GF+ + SP++A + + G + K + +
Sbjct: 231 KEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYV 290
Query: 367 PRRNGRMIGRLEME 408
R + +E++
Sbjct: 291 GRAQKKSEREIELK 304
Score = 53.1 bits (126), Expect = 1e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEAR 312
N+++K+LD +D +TL + FSA G+++S K+ G S+G GFV Y E A+
Sbjct: 128 NIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQ 181
>tr|B8ARD0|B8ARD0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16552 PE=4 SV=1
Length = 659
Score = 102 bits (255), Expect(2) = 5e-40
Identities = 51/102 (50%), Positives = 72/102 (70%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RAVE LNGK I++KEWYV RAQKKSERE+ LK + E +D +K + +N+Y+K+LD ++
Sbjct: 273 RAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNLDDSI 332
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
+ L E FS +G + S KI++ G S+G GFV +S+ EEA
Sbjct: 333 GDDQLCELFSNYGKITSCKIMRDANGVSKGSGFVAFSTREEA 374
Score = 85.1 bits (209), Expect(2) = 5e-40
Identities = 50/109 (45%), Positives = 64/109 (58%), Gaps = 10/109 (9%)
Frame = +3
Query: 291 FFTRR-SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGPP-P 440
F TR + +A+ EMNG + K L+VA AQRK+DR+V + P + P P
Sbjct: 368 FSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKVMLQAQFSQVRPVPMTPSMAPRLP 427
Query: 441 MYHPGAVLGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
MY P A LGQQ FYG P +MP Q GF +QQ ++PGM GG H+PNY
Sbjct: 428 MYPPMAPLGQQLFYGQAPPAIMPPQP-GFGFQQQLVPGMRPGGAHMPNY 475
Score = 59.3 bits (142), Expect = 2e-07
Identities = 37/134 (27%), Positives = 68/134 (50%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG I++K YV +K ERE + ++K K NV+VK+L +
Sbjct: 183 AIKSLNGMLINDKPVYVGPFLRKQERE------------NSVDKTKFNNVFVKNLSESTT 230
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYLL 366
+ L + F A+G++ S I+ +G SR GF+ + SP++A + + G + K + +
Sbjct: 231 KEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYV 290
Query: 367 PRRNGRMIGRLEME 408
R + +E++
Sbjct: 291 GRAQKKSEREIELK 304
Score = 53.1 bits (126), Expect = 1e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEAR 312
N+++K+LD +D +TL + FSA G+++S K+ G S+G GFV Y E A+
Sbjct: 128 NIFIKNLDKAIDHKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQ 181
>tr|Q6YYV1|Q6YYV1_ORYSJ Os09g0115400 protein OS=Oryza sativa subsp.
japonica GN=OJ1310_F05.15 PE=2 SV=1
Length = 662
Score = 104 bits (259), Expect(2) = 7e-39
Identities = 49/104 (47%), Positives = 74/104 (71%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ LNGK D+KEWYV RAQKKSERE+ LKE+ E ++ +K ++ N+Y+K+LD +V
Sbjct: 274 QAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSV 333
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L+E F+ +G + S K+++ G SRG GFV + S E+A +
Sbjct: 334 DDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASR 377
Score = 79.7 bits (195), Expect(2) = 7e-39
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYHPGA 458
+ +A+AEMN +GSK L+VA AQRK+DR+ R + P +GP PM+ PG
Sbjct: 375 ASRALAEMNSKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGV 434
Query: 459 V-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
+GQQ FYG P P + Q GF +QQP+MPGM G +PN+
Sbjct: 435 PGVGQQLFYGQPPPAFINTQP-GFGFQQPLMPGMRPGAGPMPNF 477
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/134 (27%), Positives = 65/134 (48%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG +++K+ YV +K ER+ + ++K NVYVK+L
Sbjct: 184 AIDKLNGMLMNDKKVYVGPFIRKQERD------------NSPGQVKFNNVYVKNLSENTT 231
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYLL 366
E LKE F G + S +++ +G S+ GFV + SP++A + Q G K + +
Sbjct: 232 EDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYV 291
Query: 367 PRRNGRMIGRLEME 408
R + +E++
Sbjct: 292 GRAQKKSEREMELK 305
Score = 49.7 bits (117), Expect = 1e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 130 LEKLKDVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
L K N+++K+LD ++D + L + F G+++S K+ G S+G GFV Y E A
Sbjct: 122 LRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAA 181
Query: 310 R 312
+
Sbjct: 182 Q 182
>tr|A2YYH2|A2YYH2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_30396 PE=4 SV=1
Length = 662
Score = 104 bits (259), Expect(2) = 7e-39
Identities = 49/104 (47%), Positives = 74/104 (71%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
+AV+ LNGK D+KEWYV RAQKKSERE+ LKE+ E ++ +K ++ N+Y+K+LD +V
Sbjct: 274 QAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLDDSV 333
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
D+ L+E F+ +G + S K+++ G SRG GFV + S E+A +
Sbjct: 334 DDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASR 377
Score = 79.7 bits (195), Expect(2) = 7e-39
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 10/104 (9%)
Frame = +3
Query: 306 SQKAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGP-PPMYHPGA 458
+ +A+AEMN +GSK L+VA AQRK+DR+ R + P +GP PM+ PG
Sbjct: 375 ASRALAEMNSKMVGSKPLYVALAQRKEDRKARLQAQFSQLRPVPLAPSVGPRMPMFPPGV 434
Query: 459 V-LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
+GQQ FYG P P + Q GF +QQP+MPGM G +PN+
Sbjct: 435 PGVGQQLFYGQPPPAFINTQP-GFGFQQPLMPGMRPGAGPMPNF 477
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/134 (27%), Positives = 65/134 (48%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG +++K+ YV +K ER+ + ++K NVYVK+L
Sbjct: 184 AIDKLNGMLMNDKKVYVGPFIRKQERD------------NSPGQVKFNNVYVKNLSENTT 231
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARKL*QR*MG*SLGAKLYLL 366
E LKE F G + S +++ +G S+ GFV + SP++A + Q G K + +
Sbjct: 232 EDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPDDAAQAVQELNGKKFDDKEWYV 291
Query: 367 PRRNGRMIGRLEME 408
R + +E++
Sbjct: 292 GRAQKKSEREMELK 305
Score = 49.7 bits (117), Expect = 1e-04
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +1
Query: 130 LEKLKDVNVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEA 309
L K N+++K+LD ++D + L + F G+++S K+ G S+G GFV Y E A
Sbjct: 122 LRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDASGESKGYGFVQYERDEAA 181
Query: 310 R 312
+
Sbjct: 182 Q 182
>tr|Q9FXA2|Q9FXA2_ARATH Putative Poly-A Binding Protein
OS=Arabidopsis thaliana GN=At1g49760/F14J22.3 PE=2 SV=1
Length = 671
Score = 107 bits (268), Expect(2) = 1e-38
Identities = 51/104 (49%), Positives = 74/104 (71%)
Frame = +1
Query: 4 RAVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTV 183
RAV+ LNGKT D+KEW+V +AQKKSERE LK++ E ++ +K + N+YVK+LD +V
Sbjct: 279 RAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESV 338
Query: 184 DERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ L+E F+ G + S K+++ P G SRG GFV +S+PEEA +
Sbjct: 339 TDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATR 382
Score = 75.5 bits (184), Expect(2) = 1e-38
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQVR--------DGIVSGPRIGPPPMYHP--GAV 461
+AI EMNG + +K L+VA AQRK+DR+ R + P +GP +P G
Sbjct: 382 RAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPP 441
Query: 462 LGQQFFYGPPLPGLMPQQANGFNYQQPVMPGMGTGGIHLPNY 587
+GQQ FYG P ++PQ GF YQQ ++PGM GG +PN+
Sbjct: 442 MGQQLFYGQGPPAMIPQP--GFGYQQQLVPGMRPGGSPMPNF 481
Score = 53.1 bits (126), Expect(2) = 5e-08
Identities = 31/103 (30%), Positives = 54/103 (52%)
Frame = +1
Query: 7 AVEGLNGKTIDEKEWYVCRAQKKSERELALKEQHELIARDRLEKLKDVNVYVKHLDSTVD 186
A++ LNG +++K+ YV K +R+ + EK+K NVYVK+L ++
Sbjct: 189 AIDKLNGMLLNDKQVYVGPFVHKLQRDPSG------------EKVKFTNVYVKNLSESLS 236
Query: 187 ERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEARK 315
+ L + F G S I++ EG S+G GFV + + ++A +
Sbjct: 237 DEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAAR 279
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 312 KAIAEMNGVKLGSKALFVAKAQRKDDRQ 395
+A+ +NG K FV KAQ+K +R+
Sbjct: 279 RAVDALNGKTFDDKEWFVGKAQKKSERE 306
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIKTPEGNSRGIGFVTYSSPEEAR 312
N+++K+LD ++D + L E FSA G ++S K+ P G S+G GFV Y + E A+
Sbjct: 134 NIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQ 187
Score = 38.5 bits (88), Expect = 0.28
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 151 NVYVKHLDSTVDERTLKEWFSAHGHVVSTKIIK-TPEGNSRGIGFVTYSSPEEARK 315
++YV LD+TV + L E F+ G VVS ++ + S G G+V Y++P++A +
Sbjct: 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASR 101
|