BP921434 |
Clone id |
YMU001_000149_H04 |
Library |
YMU01 |
Length |
506 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_H04. |
Accession |
BP921434 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1951Contig1 |
Sequence |
ATTTTATATCGGCCCTTCCAACAAGGCGAATGCACCTTGTTATTACAGTTCTTGTACAAA CACTTGGGCATGACCCCTGCCTACAAAAATGATCACACTTCGTGGCAAAAGAATTGCTCA TATATACAGAGCTCATCCTACAGAAGAAATCATGAGACAGACATGAATCATCATAGCTCA ATGGTTTGCTGATTGAGAGCTTGATAATGCCAGAGCTCCTGATTAACAAATTGTGGCTCA AGAAATCTACAAACAAACCACCAAAGCCTATACACATCTGAAAAGTTGTTTAGAAACCCC AGTGATACATATAGTACAGGCATCTCGAGTCTTTGCACCGTGTCATCTTTGGAGAGGCAC TTGTAGCCCCCCGACATCTCCATGCACCCGACTAAACGCTCTTCATGGTGTTGATCCATC TTTGATTCCATGCTTAATGTGCCCTCGATGACTCCGGTCCTAATGGAAATGTTGCCCCTA TCGGCAAGCAATTGCACTCTCTTAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q559G8 |
Definition |
sp|Q559G8|MOCOS_DICDI Molybdenum cofactor sulfurase OS=Dictyostelium discoideum |
Align length |
108 |
Score (bit) |
38.5 |
E-value |
0.018 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8B9C3 |
Definition |
tr|B8B9C3|B8B9C3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
108 |
Score (bit) |
79.3 |
E-value |
9.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921434|Adiantum capillus-veneris mRNA, clone: YMU001_000149_H04. (506 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8B9C3|B8B9C3_ORYSI Putative uncharacterized protein OS=Oryza... 79 9e-14 tr|A9REN7|A9REN7_PHYPA Predicted protein OS=Physcomitrella paten... 79 2e-13 tr|Q6ZBH4|Q6ZBH4_ORYSJ Os08g0545000 protein OS=Oryza sativa subs... 78 2e-13 tr|A2YXQ3|A2YXQ3_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|A7R1T5|A7R1T5_VITVI Chromosome undetermined scaffold_376, who... 74 3e-12 tr|A9TR75|A9TR75_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|B8A1Q9|B8A1Q9_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11 tr|B4FNI7|B4FNI7_MAIZE Putative uncharacterized protein OS=Zea m... 72 2e-11 tr|A7QKE0|A7QKE0_VITVI Chromosome chr2 scaffold_112, whole genom... 72 2e-11 tr|A9RG94|A9RG94_PHYPA Predicted protein OS=Physcomitrella paten... 65 1e-09 tr|Q2QMU3|Q2QMU3_ORYSJ Os12g0590900 protein OS=Oryza sativa subs... 58 3e-07 tr|A3CJ02|A3CJ02_ORYSJ Putative uncharacterized protein OS=Oryza... 58 3e-07 tr|A2ZM89|A2ZM89_ORYSI Putative uncharacterized protein OS=Oryza... 58 3e-07 tr|A7R4L8|A7R4L8_VITVI Chromosome undetermined scaffold_741, who... 57 7e-07 tr|A7R4E4|A7R4E4_VITVI Chromosome undetermined scaffold_670, who... 57 7e-07 tr|A5AMA2|A5AMA2_VITVI Putative uncharacterized protein OS=Vitis... 57 7e-07 tr|A9U2B6|A9U2B6_PHYPA Predicted protein OS=Physcomitrella paten... 56 9e-07 tr|Q9FGD5|Q9FGD5_ARATH Emb|CAB16785.1 OS=Arabidopsis thaliana GN... 52 2e-05 tr|Q7Y0C6|Q7Y0C6_ORYSJ Os03g0765800 protein OS=Oryza sativa subs... 52 2e-05 tr|Q10EM3|Q10EM3_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 52 2e-05 tr|A3AN05|A3AN05_ORYSJ Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|A2XMB0|A2XMB0_ORYSI Putative uncharacterized protein OS=Oryza... 52 2e-05 tr|Q9FGL6|Q9FGL6_ARATH Genomic DNA, chromosome 5, P1 clone:MJM18... 50 6e-05 tr|O82746|O82746_ARATH Putative uncharacterized protein F7H19.16... 50 8e-05 tr|O23176|O23176_ARATH Putative uncharacterized protein C7A10.26... 47 5e-04 tr|A7NTN6|A7NTN6_VITVI Chromosome chr18 scaffold_1, whole genome... 44 0.003 tr|A5BXA6|A5BXA6_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004 tr|O80468|O80468_ARATH Putative uncharacterized protein At2g2352... 43 0.008 tr|A6REX3|A6REX3_AJECN Putative uncharacterized protein OS=Ajell... 37 0.71 tr|Q8TPG3|Q8TPG3_METAC Putative uncharacterized protein OS=Metha... 37 0.71
>tr|B8B9C3|B8B9C3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30127 PE=4 SV=1 Length = 897
Score = 79.3 bits (194), Expect = 9e-14 Identities = 45/108 (41%), Positives = 60/108 (55%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 VQ LADR NIS+ G + D++ +R + GG K + D + + Sbjct: 559 VQKLADRHNISLTCGFLRHICFS----DKYDADRAAVLEHIDGGGK---RKDAAGEMGIY 611
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 V+ SLGFL NF D YRLW FV +FL+ FV +E W Y ALNQ+T+EL Sbjct: 612 VVNASLGFLTNFDDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEL 659
>tr|A9REN7|A9REN7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_174193 PE=4 SV=1 Length = 511
Score = 78.6 bits (192), Expect = 2e-13 Identities = 45/106 (42%), Positives = 65/106 (61%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 VQ LADR +IS+ T +++G+ ++E +E G + K DT+ + Sbjct: 410 VQRLADRSSISLGTSILQGSFTLEV------DETSRGISKPKKSEKSRDYKDTLHAGQFS 463
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTI 180 V+ SL FL++F+DVYRL FV FL+ FV++EL+HYQALNQQTI Sbjct: 464 VVCASLCFLSSFTDVYRLLEFVALFLDADFVHKELFHYQALNQQTI 509
>tr|Q6ZBH4|Q6ZBH4_ORYSJ Os08g0545000 protein OS=Oryza sativa subsp. japonica GN=P0623F08.34 PE=2 SV=1 Length = 659
Score = 78.2 bits (191), Expect = 2e-13 Identities = 44/108 (40%), Positives = 60/108 (55%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 VQ LADR NIS+ G + D++ +R + GG K + D + + Sbjct: 559 VQKLADRHNISLTCGFLRHICFS----DKYDADRAAVLEHIDGGGK---RKDAAGEMGIY 611
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 V+ SLGFL NF D YRLW FV +FL+ FV +E W Y ALNQ+T+E+ Sbjct: 612 VVNASLGFLTNFDDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEV 659
>tr|A2YXQ3|A2YXQ3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30126 PE=4 SV=1 Length = 660
Score = 78.2 bits (191), Expect = 2e-13 Identities = 44/108 (40%), Positives = 60/108 (55%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 VQ LADR NIS+ G + D++ +R + GG K + D + + Sbjct: 560 VQKLADRHNISLTCGFLRHICFS----DKYDADRAAVLEHIDGGGK---RKDAAGEMGIY 612
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 V+ SLGFL NF D YRLW FV +FL+ FV +E W Y ALNQ+T+E+ Sbjct: 613 VVNASLGFLTNFDDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEV 660
>tr|A7R1T5|A7R1T5_VITVI Chromosome undetermined scaffold_376, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012400001 PE=4 SV=1 Length = 474
Score = 74.3 bits (181), Expect = 3e-12 Identities = 43/108 (39%), Positives = 61/108 (56%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 +Q LADR NIS+ G + L K + ++R++ E +K L + Sbjct: 369 LQKLADRSNISLSYGFLHH-LWFSDKYEAE-KQRVIERRETEAKGMAQNKRKGKDDLGIT 426
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 V+ +LGFL NF D+YRLW FV +FL+ FV +E W Y ALNQ+TIE+ Sbjct: 427 VVTAALGFLTNFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKTIEV 474
>tr|A9TR75|A9TR75_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_149364 PE=4 SV=1 Length = 637
Score = 72.4 bits (176), Expect = 1e-11 Identities = 44/104 (42%), Positives = 60/104 (57%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRLEMP 318 VQ LAD+ NIS+ G + + E D H RL E GG + K D + LE+P Sbjct: 534 VQRLADKNNISLGLGTLCNIVYPEGSTD-HAGSRLKKRAE-GGGNEAGGKHD--RPLEIP 589
Query: 317 VLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQ 186 V+ +LGF++ F DVYRLW FV +FL+ FV +E W +LNQ+ Sbjct: 590 VVTAALGFVSTFEDVYRLWAFVAKFLDAGFVKREEWQQHSLNQE 633
>tr|B8A1Q9|B8A1Q9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 692
Score = 72.0 bits (175), Expect = 2e-11 Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLS--------KDD 342 VQ LADR NIS+ G + D+H ER V G + KD Sbjct: 581 VQKLADRHNISLTCGFLCNIWFS----DKHEAERAVVLEHRVAGDPVAAGSAGGKRRKDA 636
Query: 341 TVQRLEMPVLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 + + V+ SLGFL+NF D YRLW FV +FL+ FV +E W Y ALNQ+T+E+ Sbjct: 637 GGGDVGILVVNASLGFLSNFEDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEV 692
>tr|B4FNI7|B4FNI7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 278
Score = 72.0 bits (175), Expect = 2e-11 Identities = 46/116 (39%), Positives = 60/116 (51%), Gaps = 8/116 (6%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTLSMESKMDQHHEERLVGCMEMSGGYKCLS--------KDD 342 VQ LADR NIS+ G + D+H ER V G + KD Sbjct: 167 VQKLADRHNISLTCGFLCNIWFS----DKHEAERAVVLEHRVAGDPVAAGSAGGKRRKDA 222
Query: 341 TVQRLEMPVLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 + + V+ SLGFL+NF D YRLW FV +FL+ FV +E W Y ALNQ+T+E+ Sbjct: 223 GGGDVGILVVNASLGFLSNFEDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEV 278
>tr|A7QKE0|A7QKE0_VITVI Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001078001 PE=4 SV=1 Length = 652
Score = 71.6 bits (174), Expect = 2e-11 Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 3/111 (2%) Frame = -1
Query: 497 VQLLADRGNISIRTGVIEGTL---SMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRL 327 VQ LADR NIS+ G ++ E + ++ E R +G +E + G K K + Sbjct: 547 VQKLADRSNISLSHGFLQHIWFSDKYEEEKEKILELRTIG-VEGTLGNKKRDKSSS---- 601
Query: 326 EMPVLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQTIEL 174 + V+ +LG L NF DVY LW FV RFL+ FV +E W Y ALNQ+T+E+ Sbjct: 602 GISVVSAALGLLTNFEDVYNLWAFVSRFLDADFVEKERWRYVALNQKTVEV 652
>tr|A9RG94|A9RG94_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113639 PE=4 SV=1 Length = 574
Score = 65.5 bits (158), Expect = 1e-09 Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 3/107 (2%) Frame = -1
Query: 497 VQLLADRGNISIRTGV---IEGTLSMESKMDQHHEERLVGCMEMSGGYKCLSKDDTVQRL 327 VQ LADR NIS+ G I G+ + K D SK D Sbjct: 479 VQRLADRNNISLGLGTLCNISGSNNAAGKADPPRVSNA-------------SKHDRPS-- 523
Query: 326 EMPVLYVSLGFLNNFSDVYRLWWFVCRFLEPQFVNQELWHYQALNQQ 186 E+PV+ +LGF++ F DVYRLW FV +FL+ FV +E W Y ++NQ+ Sbjct: 524 EIPVVTAALGFVSTFEDVYRLWAFVAKFLDADFVKREEWLYHSINQE 570
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