BP921435 |
Clone id |
YMU001_000149_H05 |
Library |
YMU01 |
Length |
459 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000149_H05. |
Accession |
BP921435 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1710Contig1 |
Sequence |
GACTTCTTCTTCCAGCAGCTGCTTTCTTTCTACATCCGCATTTAGTACACATTGAAGTAT AGTTATGTCATCACTAACCACCTCCTGCTCAACGTGTAAAATCTGGCAGTTGTTTGGTAT GCCATCAATACTATGCATAGCCATGTGCTTCGGGAATGTGGTTTTACCTGTTCCATTCCT CCCAACAAGACCATAGTGTCTGCCATAGGCAAGGGTAACAGATGCTTCTGAGATCAGTTC CCTCCCACCAACAGAAATACTAAAATTATCCATTCTAATATCCCTAGGGGCAGTTCCTTC ATCCCTGTTCCAGTGATTAACAACAGCTTGAGGCATGTTAGCTTCCAAAGCCTCAACAGC AGCCAAGTGTGCCTCATACTGAACCTGTCTCTGACGATCATCTTTTCGCTTTTTCCGGTC TATCTTTGCCTTGTCTCTTTCAGATAGGAAAAAGGGAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8H0V6 |
Definition |
sp|Q8H0V6|GCN3_ARATH GCN20-type ATP-binding cassette protein GCN3 OS=Arabidopsis thaliana |
Align length |
129 |
Score (bit) |
162.0 |
E-value |
6.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S4D8 |
Definition |
tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 OS=Physcomitrella patens subsp. patens |
Align length |
111 |
Score (bit) |
173.0 |
E-value |
4.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921435|Adiantum capillus-veneris mRNA, clone: YMU001_000149_H05. (459 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfami... 173 4e-42 tr|Q6K7R4|Q6K7R4_ORYSJ Os02g0826500 protein OS=Oryza sativa subs... 166 7e-40 tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza... 166 7e-40 tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genom... 165 9e-40 tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza... 160 3e-38 tr|Q8W1S2|Q8W1S2_SOYBN ABC transporter-like protein OS=Glycine m... 155 9e-37 tr|Q8T6B8|Q8T6B8_DICDI Non-transporter ABC protein AbcF1 (ABC tr... 106 5e-22 tr|A7EH59|A7EH59_SCLS1 Putative uncharacterized protein OS=Scler... 102 7e-21 tr|A6RI52|A6RI52_BOTFB Putative uncharacterized protein OS=Botry... 102 7e-21 tr|Q5B565|Q5B565_EMENI Putative uncharacterized protein OS=Emeri... 102 1e-20 tr|A1CY12|A1CY12_NEOFI Translation initiation regulator (Gcn20),... 102 1e-20 tr|A1CGR7|A1CGR7_ASPCL Translation initiation regulator (Gcn20),... 102 1e-20 tr|Q4WNK5|Q4WNK5_ASPFU Translation initiation regulator (Gcn20),... 101 2e-20 tr|B0Y5F1|B0Y5F1_ASPFC Translation initiation regulator (Gcn20),... 101 2e-20 tr|A9VDL9|A9VDL9_MONBE Predicted protein OS=Monosiga brevicollis... 101 2e-20 tr|Q6BIM3|Q6BIM3_DEBHA DEHA2G09218p OS=Debaryomyces hansenii GN=... 101 2e-20 tr|B8NA96|B8NA96_ASPFL Translation initiation regulator (Gcn20),... 100 4e-20 tr|B8LTR3|B8LTR3_9EURO Translation initiation regulator (Gcn20),... 100 4e-20 tr|A3GFD8|A3GFD8_PICST ATP-binding cassette (ABC) family, regula... 100 4e-20 tr|A6RH16|A6RH16_AJECN Putative uncharacterized protein OS=Ajell... 100 5e-20 tr|A5DVU4|A5DVU4_LODEL Protein GCN20 OS=Lodderomyces elongisporu... 100 5e-20 tr|Q0CHL8|Q0CHL8_ASPTN Protein GCN20 OS=Aspergillus terreus (str... 100 6e-20 tr|Q22KG9|Q22KG9_TETTH ABC transporter family protein OS=Tetrahy... 99 8e-20 tr|B7PJP5|B7PJP5_IXOSC eIF2-interacting protein ABC50, putative ... 99 1e-19 tr|B6HF25|B6HF25_PENCH Pc20g00140 protein OS=Penicillium chrysog... 99 1e-19 tr|Q5ABB0|Q5ABB0_CANAL ATP-binding cassette protein OS=Candida a... 99 1e-19 tr|B6Q2M9|B6Q2M9_PENMA Translation initiation regulator (Gcn20),... 99 1e-19 tr|A2R524|A2R524_ASPNC Putative frameshift OS=Aspergillus niger ... 99 1e-19 tr|A8Q5M2|A8Q5M2_MALGO Putative uncharacterized protein OS=Malas... 98 2e-19 tr|Q1DZP5|Q1DZP5_COCIM Putative uncharacterized protein OS=Cocci... 98 2e-19
>tr|A9S4D8|A9S4D8_PHYPA ATP-binding cassette transporter, subfamily F, member 1 protein PpABCF1 OS=Physcomitrella patens subsp. patens GN=ppabcf1 PE=3 SV=1 Length = 726
Score = 173 bits (438), Expect = 4e-42 Identities = 83/111 (74%), Positives = 95/111 (85%) Frame = -1
Query: 336 MPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTT 157 MP +VNH EG +DIRM+NFSIS+GGRELI+EA+VTLA+GR YGLVGRNGTGKTT Sbjct: 162 MPAVMVNHGGVGEGAVAKDIRMENFSISMGGRELINEATVTLAHGRRYGLVGRNGTGKTT 221
Query: 156 FPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVERKQLLEEE 4 KHMAMH+IDGIP NCQILHVEQEVV DD T+LQCVL++DVERK L+EEE Sbjct: 222 LLKHMAMHAIDGIPRNCQILHVEQEVVGDDTTVLQCVLDSDVERKLLMEEE 272
>tr|Q6K7R4|Q6K7R4_ORYSJ Os02g0826500 protein OS=Oryza sativa subsp. japonica GN=P0452F04.18-1 PE=3 SV=1 Length = 692
Score = 166 bits (419), Expect = 7e-40 Identities = 83/128 (64%), Positives = 96/128 (75%) Frame = -1
Query: 387 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 208 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 207 YGRHYGLVGRNGTGKTTFPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVE 28 +GRHYGLVGRNGTGKT+F + MAMH+IDGIP NCQILHVEQEVV DD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 27 RKQLLEEE 4 R QLL+EE Sbjct: 266 RVQLLQEE 273
>tr|A3ACW9|A3ACW9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_008641 PE=3 SV=1 Length = 691
Score = 166 bits (419), Expect = 7e-40 Identities = 83/128 (64%), Positives = 96/128 (75%) Frame = -1
Query: 387 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 208 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 207 YGRHYGLVGRNGTGKTTFPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVE 28 +GRHYGLVGRNGTGKT+F + MAMH+IDGIP NCQILHVEQEVV DD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 27 RKQLLEEE 4 R QLL+EE Sbjct: 266 RVQLLQEE 273
>tr|A7QU38|A7QU38_VITVI Chromosome chr2 scaffold_176, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006684001 PE=3 SV=1 Length = 716
Score = 165 bits (418), Expect = 9e-40 Identities = 80/111 (72%), Positives = 93/111 (83%) Frame = -1
Query: 336 MPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTT 157 MP VNH N G A +DI ++NF+IS+GGR+LI + SVTL+YGRHYGLVGRNGTGKTT Sbjct: 157 MPVVCVNHDN-SSGPAIKDIHLENFNISIGGRDLIVDGSVTLSYGRHYGLVGRNGTGKTT 215
Query: 156 FPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVERKQLLEEE 4 F ++MAMH+IDGIP NCQILHVEQEVV DDI+ LQCVLN D+ER QLLEEE Sbjct: 216 FLRYMAMHAIDGIPKNCQILHVEQEVVGDDISALQCVLNTDIERTQLLEEE 266
>tr|B8AF60|B8AF60_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09528 PE=4 SV=1 Length = 708
Score = 160 bits (405), Expect = 3e-38 Identities = 80/124 (64%), Positives = 92/124 (74%) Frame = -1
Query: 387 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 208 + QY A MP VNH N G A RDI M+NFS++VGGR+LI + +VTLA Sbjct: 147 EAQYQTHVAEMEALRAGMPPVFVNH-NNSGGPAVRDIHMENFSVTVGGRDLIQDCTVTLA 205
Query: 207 YGRHYGLVGRNGTGKTTFPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVE 28 +GRHYGLVGRNGTGKT+F + MAMH+IDGIP NCQILHVEQEVV DD T LQCVLNAD+E Sbjct: 206 FGRHYGLVGRNGTGKTSFLRAMAMHAIDGIPKNCQILHVEQEVVGDDTTALQCVLNADIE 265
Query: 27 RKQL 16 RK L Sbjct: 266 RKDL 269
>tr|Q8W1S2|Q8W1S2_SOYBN ABC transporter-like protein OS=Glycine max PE=2 SV=1 Length = 636
Score = 155 bits (392), Expect = 9e-37 Identities = 78/128 (60%), Positives = 92/128 (71%) Frame = -1
Query: 387 QVQYXXXXXXXXXXXANMPQAVVNHWNRDEGTAPRDIRMDNFSISVGGRELISEASVTLA 208 + QY A MP V H N G +DI M+NF+ISVGGR+LI + VTL+ Sbjct: 140 EAQYQMHLAEMEAARAGMPVVCVRHDNSG-GPNVKDIHMENFNISVGGRDLIVDGCVTLS 198
Query: 207 YGRHYGLVGRNGTGKTTFPKHMAMHSIDGIPNNCQILHVEQEVVSDDITILQCVLNADVE 28 +GRHYGLVGRNGTGKTTF +HMAMH+IDG+P NCQILHVEQEV D T LQCVLN+D+E Sbjct: 199 FGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDATTALQCVLNSDIE 258
Query: 27 RKQLLEEE 4 R QLL+EE Sbjct: 259 RTQLLDEE 266
>tr|Q8T6B8|Q8T6B8_DICDI Non-transporter ABC protein AbcF1 (ABC transporter-related protein) OS=Dictyostelium discoideum GN=abcF1 PE=3 SV=1 Length = 708
Score = 106 bits (265), Expect = 5e-22 Identities = 52/94 (55%), Positives = 69/94 (73%) Frame = -1
Query: 285 RDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFPKHMAMHSIDGIPNNC 106 RDI +D F+++ G +LI + + L YGR YGL+GRNGTGKTT +H+A I GI NN Sbjct: 180 RDIHVDAFNVTYGKNDLIINSDLNLNYGRKYGLIGRNGTGKTTLLRHIASREI-GIDNNL 238
Query: 105 QILHVEQEVVSDDITILQCVLNADVERKQLLEEE 4 ILHVEQEV ++ T+++CVL ADVER +LL+EE Sbjct: 239 SILHVEQEVNGNETTVIECVLEADVERDRLLKEE 272
>tr|A7EH59|A7EH59_SCLS1 Putative uncharacterized protein OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_04651 PE=3 SV=1 Length = 748
Score = 102 bits (255), Expect = 7e-21 Identities = 49/100 (49%), Positives = 70/100 (70%) Frame = -1
Query: 300 EGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFPKHMAMHSIDG 121 + T +DI++DN +S+GG ++S+ ++TLAYGR YGLVG+NG GK+T + +A + Sbjct: 189 QSTKSKDIKVDNIDVSIGGLRILSDTNLTLAYGRRYGLVGQNGIGKSTLLRALARREL-A 247
Query: 120 IPNNCQILHVEQEVVSDDITILQCVLNADVERKQLLEEEV 1 +P + ILHVEQE+ DD LQ VL+ADV RK LL E+V Sbjct: 248 VPTHISILHVEQEISGDDTPALQAVLDADVWRKHLLAEQV 287
>tr|A6RI52|A6RI52_BOTFB Putative uncharacterized protein OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_00123 PE=3 SV=1 Length = 748
Score = 102 bits (255), Expect = 7e-21 Identities = 49/100 (49%), Positives = 70/100 (70%) Frame = -1
Query: 300 EGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFPKHMAMHSIDG 121 + T +DI++DN +S+GG ++S+ ++TLAYGR YGLVG+NG GK+T + +A + Sbjct: 189 QSTKSKDIKVDNIDVSIGGLRILSDTNLTLAYGRRYGLVGQNGIGKSTLLRALARREL-A 247
Query: 120 IPNNCQILHVEQEVVSDDITILQCVLNADVERKQLLEEEV 1 +P + ILHVEQE+ DD LQ VL+ADV RK LL E+V Sbjct: 248 VPTHISILHVEQEISGDDTPALQAVLDADVWRKHLLAEQV 287
>tr|Q5B565|Q5B565_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN4315.2 PE=3 SV=1 Length = 751
Score = 102 bits (253), Expect = 1e-20 Identities = 50/100 (50%), Positives = 70/100 (70%) Frame = -1
Query: 303 DEGTAPRDIRMDNFSISVGGRELISEASVTLAYGRHYGLVGRNGTGKTTFPKHMAMHSID 124 D +DI+++ ISVGG ++SEAS+TLAYGR YGLVG+NG GK+T + ++ + Sbjct: 191 DSQAKSKDIKLEGIDISVGGHRILSEASLTLAYGRRYGLVGQNGIGKSTLLRALSRREV- 249
Query: 123 GIPNNCQILHVEQEVVSDDITILQCVLNADVERKQLLEEE 4 IP++ ILHVEQE+ DD LQ VL+ADV RK+LL ++ Sbjct: 250 AIPSHISILHVEQEITGDDTPALQAVLDADVWRKRLLADQ 289
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