BP921441
Clone id YMU001_000149_H11
Library
Length 313
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000149_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TAGCATTACAAGCACAAATCTTTCAATTAAGTGGATAAGACCCGAAGACTCCACAATTGA
TGCCCAGGTTTCATGTCACGGCATCAACAACAATCTGTCCGATCCTTGCTCGGACACCAA
AAAATGTCAGATTGATTTATGTACACAGACTGCCATCTCTCTATCTATCTATGAATCTTC
TGATCTGCGCTCTCTCTATTGGCTAAGGTCCTCCCACATGCCCAAAAGACCTTTGATGGG
CAAGGCGACATGTTGCCAGGCCTTTACAGTAACAACAATAAATGCCAGAAAACTCCAAGG
GGTCTACATTATG
■■Homology search results ■■ -
sp_hit_id O07899
Definition sp|O07899|VIBE_VIBCH Vibriobactin-specific 2,3-dihydroxybenzoate-AMP ligase OS=Vibrio cholerae
Align length 55
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921441|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_H11.
(313 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O07899|VIBE_VIBCH Vibriobactin-specific 2,3-dihydroxybenzoate... 31 1.7
sp|Q3UHD3|K0774_MOUSE Uncharacterized protein KIAA0774 OS=Mus mu... 29 8.3

>sp|O07899|VIBE_VIBCH Vibriobactin-specific
2,3-dihydroxybenzoate-AMP ligase OS=Vibrio cholerae
GN=vibE PE=3 SV=1
Length = 543

Score = 31.2 bits (69), Expect = 1.7
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Frame = +3

Query: 9 QAQIFQLSG*DPKTPQLMPRFH------VTASTTICPILARTPKNVRLIYVHRLP 155
Q FQLSG TP+L+PR H VTAS IC T L H P
Sbjct: 187 QIAFFQLSGGTTGTPKLIPRTHNDYAYSVTASVEICRFDQHTRYLCVLPAAHNFP 241


>sp|Q3UHD3|K0774_MOUSE Uncharacterized protein KIAA0774 OS=Mus
musculus GN=Kiaa0774 PE=2 SV=1
Length = 1353

Score = 28.9 bits (63), Expect = 8.3
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +3

Query: 99 PILARTPKNVR---LIYVHRLPSLYLSMNLLICALSIG*GPPTCPKDL*WARRHVARPLQ 269
PIL PK+VR + Y+ R P + + + + PPTC L + +R LQ
Sbjct: 616 PILMPKPKHVRPKIITYIRRNPQALSQGDASLVPVGLPYAPPTCGMPLPQEEKAASRDLQ 675

Query: 270 *QQ*MPENSK 299
M E K
Sbjct: 676 PSANMYEKLK 685


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921441|Adiantum capillus-veneris mRNA, clone:
YMU001_000149_H11.
(313 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******