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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921442
Clone id YMU001_000150_A01
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_A01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCAAAGGAAGGAGACCAACATTCTTGCATAAATGGAATTGGGCAAAAATGTGGTGGCACC
ACAACCATTCATGACTAGACTTCACAATACAGGTCCACTAAGGACATTCAGCAAAGGAAT
TGGCAGAATATGTAAAGGTATCAGTAATAAAATAATTCAATGCAGCCATGTACTTAATGT
GGAACTTTGAGACATATACATGGGTTTGCATGTGTGACTATGTGCAAACATAGGAATGCA
AGGGGCATTCTAATCGTTAATTATACACCTACAAACAAAAGAGTTAATTTCTCCAATGAT
GGGAGAATGAAGGCACTCGCTTAGGTAGTTACAATTTTCTTGGAGGAGATACCTCTTGTA
GTTGAGTAGCAAACAAATCAATTAGCATAAGAAAATTAGACACAACACTCTCAACTCGAC
CATACAAGAATGACAAAAGAAGGAAATAATACCCTAAATTGTTTTCAGTGTGGCTGCCGT
GCATGTATCAAGATCGA
■■Homology search results ■■ -
sp_hit_id Q6P7G9
Definition sp|Q6P7G9|GP146_XENLA Probable G-protein coupled receptor 146 OS=Xenopus laevis
Align length 60
Score (bit) 31.6
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921442|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_A01.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P7G9|GP146_XENLA Probable G-protein coupled receptor 146 OS...    32   2.1  
sp|Q5UPQ4|YL764_MIMIV Putative ankyrin repeat protein L764 OS=Ac...    31   3.6  

>sp|Q6P7G9|GP146_XENLA Probable G-protein coupled receptor 146
           OS=Xenopus laevis GN=gpr146 PE=2 SV=1
          Length = 333

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
 Frame = +2

Query: 59  PQPFMTRLHNT----------GPLRTFSKGIGRICKGISNKIIQCSHVLNVEL*DIYMGL 208
           P+ +M+ ++NT            L +FS  +  IC  +S KII+CS + N E  D  M L
Sbjct: 134 PRTYMSSVYNTKHVCGFIWGGAVLTSFSSLLFYICNHVSTKIIECSKMQNREAADAIMVL 193


>sp|Q5UPQ4|YL764_MIMIV Putative ankyrin repeat protein L764
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L764 PE=4
           SV=1
          Length = 647

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -3

Query: 360 YKRYLLQENCNYLSECLHSPIIGEINSFVCRCIIND 253
           YK  LL  N   L  CL+   I ++N+F+ + I ND
Sbjct: 379 YKNILLTNNVTILDLCLNHCEINDVNNFILKIIEND 414
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921442|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_A01.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******