BP921454
Clone id YMU001_000150_B03
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCCAAAGATTGCTGTAAGGGTTTGCAAATCACCCTTCAAGCTTACGCGTAATCCTGCTTA
ACCGGTTCTTTGCTTCTGGCAGGGCTCAAGCCATCCTCACTTTCTGATATCAGCATAGCC
ATGCCCCCTGCCTTCTTCCGAGCTCGTGCCCATTGTTTCTGTTCCCGGCGTGTAGGTGCC
AGTCTCCACCTATGGCTTGTCTATGTTGAGTGGCCTCATCAGTAGGATTTCCTTCCCGAA
GCGCTTCCACTTGCAATGCAAGCACAGACTTTGGAGGTGTCACA
■■Homology search results ■■ -
sp_hit_id Q6E0U4
Definition sp|Q6E0U4|DMKN_HUMAN Dermokine OS=Homo sapiens
Align length 49
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921454|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B03.
(284 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6E0U4|DMKN_HUMAN Dermokine OS=Homo sapiens GN=DMKN PE=1 SV=2 30 3.7
sp|Q21AM9|MNMA_RHOPB tRNA-specific 2-thiouridylase mnmA OS=Rhodo... 30 4.9
sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus... 29 8.3

>sp|Q6E0U4|DMKN_HUMAN Dermokine OS=Homo sapiens GN=DMKN PE=1 SV=2
Length = 476

Score = 30.0 bits (66), Expect = 3.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -3

Query: 186 ETGTYTPGTETMGTSSEEGRGHGYADIRK*GWLEPCQKQRTG*AGLRVS 40
E G G E+ GT+ E GHG D G + K+ G AG +VS
Sbjct: 20 EAGPLQSGEESTGTNIGEALGHGLGDALSEGVGKAIGKEAGGAAGSKVS 68


>sp|Q21AM9|MNMA_RHOPB tRNA-specific 2-thiouridylase mnmA
OS=Rhodopseudomonas palustris (strain BisB18) GN=mnmA
PE=3 SV=2
Length = 400

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1

Query: 185 RLAPTRREQKQWARARKKAGGMAMLISESEDGLSPARS 72
R+ TRR Q W RA+ GG + + EDG+SP ++
Sbjct: 318 RVRSTRRPQPAWLRAQD--GGYQVELVAGEDGVSPGQA 353


>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus
GN=AP3D1 PE=2 SV=2
Length = 1207

Score = 28.9 bits (63), Expect = 8.3
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -1

Query: 194 HRWRLAPTRREQKQWARARKKAGGMAMLISESEDGLSPARSKEPVKQD 51
HR RL +R++K+ R R+ + L +ES++ ++PA+ + V ++
Sbjct: 733 HRQRLEKDKRKKKKRERERRGTRRHSSLHTESDEDIAPAQRVDIVTEE 780


tr_hit_id B8LMW2
Definition tr|B8LMW2|B8LMW2_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 48
Score (bit) 37.7
E-value 0.0008
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921454|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B03.
(284 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LMW2|B8LMW2_PICSI Putative uncharacterized protein OS=Picea... 38 8e-04
tr|A9T8R3|A9T8R3_PHYPA Predicted protein (Fragment) OS=Physcomit... 42 0.015
tr|Q5QMQ3|Q5QMQ3_ORYSJ cDNA clone:J013110J02, full insert sequen... 41 0.026
tr|Q5QMQ2|Q5QMQ2_ORYSJ Putative uncharacterized protein P0007F06... 41 0.026
tr|A2Z931|A2Z931_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.026
tr|A7PJH4|A7PJH4_VITVI Chromosome chr12 scaffold_18, whole genom... 41 0.034
tr|A5AH71|A5AH71_VITVI Putative uncharacterized protein OS=Vitis... 41 0.034
tr|B7FKN4|B7FKN4_MEDTR Putative uncharacterized protein OS=Medic... 39 0.13
tr|B7FI50|B7FI50_MEDTR Putative uncharacterized protein OS=Medic... 39 0.13
tr|Q8LB58|Q8LB58_ARATH Putative uncharacterized protein OS=Arabi... 39 0.17
tr|O82279|O82279_ARATH Expressed protein (At2g31040/T16B12.15) O... 39 0.17
tr|A7F7E4|A7F7E4_SCLS1 Putative uncharacterized protein OS=Scler... 35 1.9
tr|A9PJP5|A9PJP5_POPJC Putative uncharacterized protein OS=Popul... 35 2.5
tr|A6SKL3|A6SKL3_BOTFB Putative uncharacterized protein OS=Botry... 34 4.2
tr|A9FDM6|A9FDM6_SORC5 Putative uncharacterized protein OS=Soran... 33 7.2

>tr|B8LMW2|B8LMW2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 381

Score = 37.7 bits (86), Expect(2) = 8e-04
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = -1

Query: 191 RWRLAPTRREQKQWARARKKA-GGMAMLI-----SESEDGLSPARSKE 66
RWR+ TRREQ+QW RA K A GG +L+ S + + A+SK+
Sbjct: 199 RWRVISTRREQQQWDRASKAATGGTGLLLRNLNKSREDPAVIAAQSKQ 246



Score = 28.1 bits (61), Expect(2) = 8e-04
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -2

Query: 277 PPKSVLALQVEALREGNPTDEA 212
P SVL QVEA R G PTD+A
Sbjct: 171 PSNSVLERQVEAARLGLPTDQA 192


>tr|A9T8R3|A9T8R3_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_44549 PE=4 SV=1
Length = 313

Score = 42.0 bits (97), Expect = 0.015
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -1

Query: 191 RWRLAPTRREQKQWARARKK-AGGMAMLISESEDG-LSPARSKEPVKQDY 48
+WR APT+RE++QWARA K +GG L+ +SE + P +S ++ Y
Sbjct: 139 KWRFAPTKREEEQWARATKAVSGGSEKLMRDSEKKVVDPVKSAAIARKKY 188


>tr|Q5QMQ3|Q5QMQ3_ORYSJ cDNA clone:J013110J02, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0007F06.35-1 PE=2
SV=1
Length = 364

Score = 41.2 bits (95), Expect = 0.026
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1

Query: 197 SHRWRLAPTRREQKQWARARKKA-GGMAMLISESE 96
S RWRL PTRREQ +W RA K A GG +++ ES+
Sbjct: 180 SPRWRLVPTRREQAKWDRAAKAATGGSDVILRESK 214


>tr|Q5QMQ2|Q5QMQ2_ORYSJ Putative uncharacterized protein
P0007F06.35-2 (Os01g0673800 protein) (Putative
uncharacterized protein P0485G01.25-2) OS=Oryza sativa
subsp. japonica GN=P0007F06.35-2 PE=4 SV=1
Length = 311

Score = 41.2 bits (95), Expect = 0.026
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1

Query: 197 SHRWRLAPTRREQKQWARARKKA-GGMAMLISESE 96
S RWRL PTRREQ +W RA K A GG +++ ES+
Sbjct: 180 SPRWRLVPTRREQAKWDRAAKAATGGSDVILRESK 214


>tr|A2Z931|A2Z931_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_34221 PE=4 SV=1
Length = 364

Score = 41.2 bits (95), Expect = 0.026
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -1

Query: 197 SHRWRLAPTRREQKQWARARKKA-GGMAMLISESE 96
S RWRL PTRREQ +W RA K A GG +++ ES+
Sbjct: 180 SPRWRLVPTRREQAKWDRAAKAATGGSDVILRESK 214


>tr|A7PJH4|A7PJH4_VITVI Chromosome chr12 scaffold_18, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018736001
PE=4 SV=1
Length = 338

Score = 40.8 bits (94), Expect = 0.034
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1

Query: 200 TSHRWRLAPTRREQKQWARARKKAGG 123
TS RW+L PTRREQ++W RA K A G
Sbjct: 153 TSRRWKLVPTRREQEKWDRATKAATG 178


>tr|A5AH71|A5AH71_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018738 PE=4 SV=1
Length = 338

Score = 40.8 bits (94), Expect = 0.034
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -1

Query: 200 TSHRWRLAPTRREQKQWARARKKAGG 123
TS RW+L PTRREQ++W RA K A G
Sbjct: 153 TSRRWKLVPTRREQEKWDRATKAATG 178


>tr|B7FKN4|B7FKN4_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 349

Score = 38.9 bits (89), Expect = 0.13
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -1

Query: 191 RWRLAPTRREQKQWARARKKA-GGMAMLISES 99
RWRLAPTRREQ +W RA K A G +++ ES
Sbjct: 154 RWRLAPTRREQDKWNRAAKAATDGSDVMLRES 185


>tr|B7FI50|B7FI50_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 224

Score = 38.9 bits (89), Expect = 0.13
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -1

Query: 191 RWRLAPTRREQKQWARARKKA-GGMAMLISES 99
RWRLAPTRREQ +W RA K A G +++ ES
Sbjct: 37 RWRLAPTRREQDKWNRAAKAATDGSDVMLRES 68


>tr|Q8LB58|Q8LB58_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana PE=2 SV=1
Length = 350

Score = 38.5 bits (88), Expect = 0.17
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = -1

Query: 197 SHRWRLAPTRREQKQWARARKKAGG 123
S +W+LAPTRREQ++W RA K A G
Sbjct: 158 SPKWKLAPTRREQEKWDRATKAATG 182