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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921456
Clone id YMU001_000150_B05
Library
Length 458
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GACAGTCAAAGAGCCAATGGGAGCCTATAAATACGGCTCATTAGTTCAATTGTCAGGGGT
TGTTGTGTGGATTTCGATACCATATACTAGCTTAGAGCTCTACATACCTTTGTAATTCTA
ATTGAGCTGAAGACATATTTGTAGTACTGATTACACTTGTACACACTTGTTTGGTCTGAA
TATACGAGTCTAGTTTCAGTTTCCATTTCTGGTGTCACTATCTTTTCAGTTTTAGTGTTC
AATATTAGTTTCTAGTTTTGGTCTGGTCACAGTCTTATCTTTTAGTTTATGTTTAGTGTG
ATCTGAAGTCTCATACGTGGTCTAACTAACTCTAACTACCAACCTGGGATAGCTGTCTAA
AAGCATCCAGTTCATTCCAGTTTGGCGATCACGGTGGCTTGAGCAGAGTTGCTCTAGACA
AAATGAACTATCTCCCAACTGGTGTAAGAGCTATCACG
■■Homology search results ■■ -
sp_hit_id Q38931
Definition sp|Q38931|FKB70_ARATH 70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana
Align length 38
Score (bit) 30.0
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921456|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B05.
         (458 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q38931|FKB70_ARATH 70 kDa peptidyl-prolyl isomerase OS=Arabid...    30   5.0  

>sp|Q38931|FKB70_ARATH 70 kDa peptidyl-prolyl isomerase
           OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2
          Length = 551

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -2

Query: 202 KLKLDSYIQTKQVCTSV--ISTTNMSSAQLELQRYVEL 95
           KLKL  Y Q +++CT V  + +TN+ +     Q Y+EL
Sbjct: 459 KLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYMEL 496
tr_hit_id B7FZI1
Definition tr|B7FZI1|B7FZI1_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1
Align length 30
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921456|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B05.
         (458 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7FZI1|B7FZI1_PHATR Predicted protein OS=Phaeodactylum tricor...    34   4.1  

>tr|B7FZI1|B7FZI1_PHATR Predicted protein OS=Phaeodactylum
           tricornutum CCAP 1055/1 GN=PHATRDRAFT_46012 PE=4 SV=1
          Length = 2229

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 429 SSFCLEQLCSSHRDRQTGMNWMLLDSYPRL 340
           ++FCLEQ   SHRDR+  M+  LL++  RL
Sbjct: 445 AAFCLEQHIKSHRDRRASMSQSLLENLHRL 474