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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921458
Clone id YMU001_000150_B08
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTTTTGGTTGCTAGCAAAAACACAAGAAAGAACAAGGTCAAGAGTTATCCAATGTCATGG
TTGCTAACACCCGTGTCTTGCTTAGCATATCCACTCTTAAAGTTAACCATCAATTTATTT
AGTCTCTCAAGTAAAGAAATAAGTGACTTATATAAATGAGTGACTTACAGGAACTCTCGG
CTATGTGTGTTTTGATAAAGCGCCTCTCATTAACCCGCTCGAAATAGTTCGCTCGGAGTT
TGGGATTCCTCCAAGAAATGTATGGATTTTGATCAGGGAGTCTAGCATGGGTTACGTCAG
GTAACTACATGGGGCTCATAAGATGGAATCTGATGCAAATATAGTGTAGGTCTTACCTCC
AAACTTTATGGTTTGGGCAATGTCTAAACACATACAATTGCGTGTCATCATTTTCTTTTG
GGAGCTTCATTAGGGCCTCTCTCTCTCGCAGGTACTC
■■Homology search results ■■ -
sp_hit_id Q9W2F2
Definition sp|Q9W2F2|VPRBP_DROME VPRBP-like protein OS=Drosophila melanogaster
Align length 53
Score (bit) 29.6
E-value 6.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921458|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B08.
         (457 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9W2F2|VPRBP_DROME VPRBP-like protein OS=Drosophila melanogas...    30   6.6  
sp|P52824|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens...    30   6.6  

>sp|Q9W2F2|VPRBP_DROME VPRBP-like protein OS=Drosophila melanogaster
            GN=CG10080 PE=1 SV=2
          Length = 1544

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -1

Query: 337  CIRFHLMSPM*LPDVTHARLPDQNPYISWRNPKLRANYFERVNERRFIKTHIA 179
            C +F L  P   PD   +RL   N  ++ R+ + +A +     +RR++ TH +
Sbjct: 1091 CPQFDLYEPHKCPDPKPSRLLSSNYNLTSRHARTQAGFNTSRFDRRYVHTHFS 1143


>sp|P52824|DGKQ_HUMAN Diacylglycerol kinase theta OS=Homo sapiens
           GN=DGKQ PE=2 SV=1
          Length = 942

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 340 ICIRFHLMSPM*LPDVTHARL-PDQNPYISWRNPK 239
           + +R  L++ + LPD+ HA+L PD  P + + NPK
Sbjct: 562 MAVRGRLLTALVLPDLLHAKLPPDSCPLLVFVNPK 596
tr_hit_id Q7VQF4
Definition tr|Q7VQF4|Q7VQF4_BLOFL DNA uptake lipoprotein OS=Blochmannia floridanus
Align length 78
Score (bit) 33.9
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921458|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_B08.
         (457 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7VQF4|Q7VQF4_BLOFL DNA uptake lipoprotein OS=Blochmannia flo...    34   4.1  
tr|Q93GD6|Q93GD6_DESAF Dissimilatory sulfite reductase alpha sub...    34   4.1  
tr|A1DWC1|A1DWC1_9BACT Dissimilatory sulfite reductase alpha sub...    34   4.1  
tr|Q5EM17|Q5EM17_9DELT Dissimilatory sulfite reductase alpha sub...    33   5.4  
tr|Q2M459|Q2M459_9BACT Dissimilatory sulfite reductase subunit A...    33   5.4  
tr|A8UHS5|A8UHS5_9FLAO Major facilitator superfamily protein OS=...    33   7.1  
tr|Q18N90|Q18N90_9BACT Dissimilatory sulfite reductase alpha sub...    33   9.2  

>tr|Q7VQF4|Q7VQF4_BLOFL DNA uptake lipoprotein OS=Blochmannia
           floridanus GN=yfiO PE=4 SV=1
          Length = 246

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = -1

Query: 349 LHYICIRFHLMSPM*LPDVTHARLPDQNP---YISWRNPKLRANYFERVNERRFIKTHIA 179
           L YI +  +++  +    ++H ++PDQ+    Y    N  L+ NY E + +  ++K    
Sbjct: 4   LFYIILALNMIMTISCTTISHHKIPDQDTNHLYKIAYNKLLQNNYTEAIQDLLYLKNLYL 63

Query: 178 ESSCKSLIYISHLFLYLR 125
              C   IY+  ++ Y +
Sbjct: 64  FEPCPQQIYLDLIYAYYK 81


>tr|Q93GD6|Q93GD6_DESAF Dissimilatory sulfite reductase alpha
           subunit (Fragment) OS=Desulfovibrio africanus GN=dsrA
           PE=4 SV=1
          Length = 375

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 301 PDVTHARLPDQNPYISWRNPKLRANYFERVNERR 200
           PD  H + P +NPYI W+  ++  N+   + E R
Sbjct: 337 PDARHVKYPRENPYIFWKEEEVGXNWDRPIEEXR 370


>tr|A1DWC1|A1DWC1_9BACT Dissimilatory sulfite reductase alpha
           subunit (Fragment) OS=uncultured sulfate-reducing
           bacterium GN=dsrA PE=4 SV=1
          Length = 375

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 301 PDVTHARLPDQNPYISWRNPKLRANYFERVNERR 200
           PD  H + P  NPYI W+  ++   +   VNE R
Sbjct: 337 PDARHVKEPRSNPYIFWKEDEVEGGWTRDVNEYR 370


>tr|Q5EM17|Q5EM17_9DELT Dissimilatory sulfite reductase alpha
           subunit (Fragment) OS=Desulfovibrio alkalitolerans
           GN=dsrA PE=4 SV=1
          Length = 375

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 301 PDVTHARLPDQNPYISWRNPKLRANYFERVNERR 200
           PD  H + P +NPYI W+  ++   +   +NE R
Sbjct: 337 PDARHVQHPRRNPYIFWKEEEVNGGWDRXINEYR 370


>tr|Q2M459|Q2M459_9BACT Dissimilatory sulfite reductase subunit A
           (Fragment) OS=uncultured sulfate-reducing bacterium
           GN=dsrA PE=4 SV=1
          Length = 380

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -1

Query: 301 PDVTHARLPDQNPYISWRNPKLRANYFERVNERR 200
           PD  H + P  NPYI W+  ++   +   VNE R
Sbjct: 342 PDARHVKEPRSNPYIFWKEEEVEGGWTRDVNEFR 375


>tr|A8UHS5|A8UHS5_9FLAO Major facilitator superfamily protein
           OS=Flavobacteriales bacterium ALC-1 GN=FBALC1_04337 PE=4
           SV=1
          Length = 404

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -3

Query: 152 YKSLISLLERLNKLMVNFKSGYAKQDTGVSNHDIG 48
           Y SLISL+ R   +++ F S Y K D G +  DIG
Sbjct: 21  YLSLISLVNRAGTMVIPFLSLYLKNDLGYTEDDIG 55


>tr|Q18N90|Q18N90_9BACT Dissimilatory sulfite reductase alpha
           subunit (Fragment) OS=uncultured sulfate-reducing
           bacterium GN=dsrA PE=4 SV=1
          Length = 375

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 301 PDVTHARLPDQNPYISWRNPKLRANYFERVNERR 200
           PD  H + P  NPYI W+  ++   +   +NE R
Sbjct: 337 PDARHVQEPRTNPYIFWKEEEVEGGFERDINEYR 370