BP921468 |
Clone id |
YMU001_000150_C08 |
Library |
YMU01 |
Length |
627 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000150_C08. |
Accession |
BP921468 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1074Contig1 |
Sequence |
TTTGAACTCTTCAAGTAGCTTTAAGAAGCTGAGGTATGAGGGCAATGGTTCAATTAGTGC CGATACGTTCTAACAACTTGTTCAATCCGACGTCGACAAAGGGGACAGTTGGAAAGCTGA GTGGAACACGATGTACAAGAGCACATATGGCCACAAGGTACAAAAACAGCATTGTATTCT TGCTCCAGGCATATGACACAAAGGTCGGGAACTACAGAATCCATCTTTGGCTCAAAGATA TCATCCTCCAAGTGACCATCTCGTCCATCAATTTCTCCTGCACGAACTTGCTGCTGGCGC TCTCGCCTCTGTGCTGCAGCTTCCATTACTCTTCTATTTAAAGCAGCTCTTCTCCGCCTT TCAAAAAAGTATTTGATTGCATGTGTCGTCATGAGGTAAAGTCCAAACACTGTAAACCCA AGTGACATGAACTTGTACCACCTTGACCACTTCCCAAGATTGATGATTAGCTCATCAATG CTTTTGGGGGAGACATAGAAAGGACCTTTGTGAGGCTTCTGGATCCGGAGTGTACCCAAA TCATCTTGAACAGNCTCACCCACAACAGTCAGAGTAGTGCCTACAGGCAACACTCTCTCT ACCCGCTTTACTCCGAGCATCTTAAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8WY64 |
Definition |
sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens |
Align length |
47 |
Score (bit) |
65.9 |
E-value |
2.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PU46 |
Definition |
tr|A7PU46|A7PU46_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
190 |
Score (bit) |
211.0 |
E-value |
2.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921468|Adiantum capillus-veneris mRNA, clone: YMU001_000150_C08. (613 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PU46|A7PU46_VITVI Chromosome chr7 scaffold_31, whole genome... 211 2e-53 tr|A9RJ34|A9RJ34_PHYPA Predicted protein OS=Physcomitrella paten... 210 5e-53 tr|A9PFT8|A9PFT8_POPTR Putative uncharacterized protein OS=Popul... 209 8e-53 tr|Q1RSJ8|Q1RSJ8_MEDTR Zinc finger, RING-type OS=Medicago trunca... 194 3e-48 tr|B8B5A5|B8B5A5_ORYSI Putative uncharacterized protein OS=Oryza... 192 2e-47 tr|Q8L7N4|Q8L7N4_ARATH Putative RING zinc finger protein (Putati... 190 5e-47 tr|A9T6Y2|A9T6Y2_PHYPA Predicted protein OS=Physcomitrella paten... 188 2e-46 tr|A5BV53|A5BV53_VITVI Putative uncharacterized protein OS=Vitis... 180 7e-44 tr|B4FE21|B4FE21_MAIZE Putative uncharacterized protein OS=Zea m... 166 8e-40 tr|Q9SLU0|Q9SLU0_ARATH ZCF61 protein OS=Arabidopsis thaliana GN=... 137 6e-31 tr|Q9LQ59|Q9LQ59_ARATH T30E16.12 OS=Arabidopsis thaliana PE=4 SV=1 137 6e-31 tr|Q94HV7|Q94HV7_ARATH Putative uncharacterized protein T4M14.12... 137 6e-31 tr|A3BMV1|A3BMV1_ORYSJ Putative uncharacterized protein OS=Oryza... 132 2e-29 tr|B7ZXM7|B7ZXM7_MAIZE Putative uncharacterized protein OS=Zea m... 124 3e-27 tr|Q9CAK3|Q9CAK3_ARATH Putative RING zinc finger protein; 22238-... 114 5e-24 tr|Q0D437|Q0D437_ORYSJ Os07g0647800 protein OS=Oryza sativa subs... 107 7e-22 tr|Q8VX96|Q8VX96_PINPS Putative RING zinc finger protein (Fragme... 102 2e-20 tr|Q1RSJ6|Q1RSJ6_MEDTR T30E16.12, related OS=Medicago truncatula... 72 3e-11 tr|Q1RPW2|Q1RPW2_CIOIN Zinc finger protein OS=Ciona intestinalis... 68 5e-10 tr|A6R5H9|A6R5H9_AJECN Predicted protein OS=Ajellomyces capsulat... 67 6e-10 tr|B6HHQ4|B6HHQ4_PENCH Pc21g14320 protein OS=Penicillium chrysog... 67 8e-10 tr|Q1RPV6|Q1RPV6_CIOIN Zinc finger protein OS=Ciona intestinalis... 67 1e-09 tr|Q1RSJ7|Q1RSJ7_MEDTR Putative uncharacterized protein OS=Medic... 66 1e-09 tr|A2CF42|A2CF42_DANRE Novel protein similar to vertebrate leuci... 66 2e-09 tr|A0CS68|A0CS68_PARTE Chromosome undetermined scaffold_26, whol... 66 2e-09 tr|Q5TIA5|Q5TIA5_HUMAN Myosin regulatory light chain interacting... 66 2e-09 tr|Q5TIA4|Q5TIA4_HUMAN Myosin regulatory light chain interacting... 66 2e-09 tr|B2RBG2|B2RBG2_HUMAN cDNA, FLJ95492, highly similar to Homo sa... 66 2e-09 tr|Q8WRD9|Q8WRD9_AEDTR Inhibitor of apotosis protein 1-like prot... 65 2e-09 tr|Q4WE48|Q4WE48_ASPFU MATH and UCH domain protein, putaitve OS=... 65 3e-09
>tr|A7PU46|A7PU46_VITVI Chromosome chr7 scaffold_31, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00023653001 PE=4 SV=1 Length = 343
Score = 211 bits (538), Expect = 2e-53 Identities = 105/190 (55%), Positives = 127/190 (66%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR+ER ++DD+GT+RIQ+PHKGPFYVSPKSID L+ NLGKW Sbjct: 161 LKMLGVKRIERVLPTGTPLTVVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDHLVANLGKW 220
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 +RWY++ SLGFTVFG+YL+ AI+Y E + D Sbjct: 221 ARWYRYASLGFTVFGVYLIAKSAIQYVMERKRCWELRKRVLAAASKKSGQDSE----DPD 276
Query: 252 GRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRR 73 +D + D+ K D ++PDLCVICLEQEYNAVFVPCGHMC CT CS+QL+NCPLCRRR Sbjct: 277 EKDENGSDN---TKRDRLMPDLCVICLEQEYNAVFVPCGHMCCCTMCSSQLTNCPLCRRR 333
Query: 72 IEQVVRTYRH 43 IEQVVRT+RH Sbjct: 334 IEQVVRTFRH 343
>tr|A9RJ34|A9RJ34_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175369 PE=4 SV=1 Length = 352
Score = 210 bits (535), Expect = 5e-53 Identities = 102/192 (53%), Positives = 125/192 (65%), Gaps = 2/192 (1%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKRVER VQDD G +RIQKP+KGPFYV+PKS+D+L+ NLG+W Sbjct: 161 LKMLGVKRVERVLPTGTNLTVVGEAVQDDRGLIRIQKPNKGPFYVTPKSLDQLVANLGRW 220
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 SRWYK+MSLGFT+ G+Y +T+HAIK+F E G++ Sbjct: 221 SRWYKYMSLGFTIVGIYFITSHAIKHFMERRRREALHRRVMEAAALRQASQREGGDGDMG 280
Query: 252 GRDGHLEDDIFE--PKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCR 79 H DD + K D PDLCVICLEQ+YNAVF+PCGHMC CTSCS QL++CPLCR Sbjct: 281 DVTSHPLDDSVDTSQKKDRGTPDLCVICLEQDYNAVFLPCGHMCCCTSCSAQLTSCPLCR 340
Query: 78 RRIEQVVRTYRH 43 R I++ V+TYRH Sbjct: 341 RHIDKFVKTYRH 352
>tr|A9PFT8|A9PFT8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 238
Score = 209 bits (533), Expect = 8e-53 Identities = 104/190 (54%), Positives = 122/190 (64%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR+ER V+DD+GT+RIQ+PHKGPFYVSPKSIDELI NLGKW Sbjct: 57 LKMLGVKRIERVLPTGTSLTVVGEAVKDDIGTVRIQRPHKGPFYVSPKSIDELIGNLGKW 116
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 +RWYK+ SLG TVFG +L+T H I+Y E + Sbjct: 117 ARWYKYASLGLTVFGAFLITKHVIRYIMERRRRWELQSRVLAAAKRSGQDNEGSNDKAEN 176
Query: 252 GRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRR 73 G DG K + +PDLCVICLEQEYNAVF+PCGHMC C +C +QLSNCPLCRRR Sbjct: 177 GSDG--------AKRERPIPDLCVICLEQEYNAVFLPCGHMCCCITCCSQLSNCPLCRRR 228
Query: 72 IEQVVRTYRH 43 IEQVV+T+RH Sbjct: 229 IEQVVKTFRH 238
>tr|Q1RSJ8|Q1RSJ8_MEDTR Zinc finger, RING-type OS=Medicago truncatula GN=MtrDRAFT_AC161864g30v2 PE=4 SV=2 Length = 341
Score = 194 bits (493), Expect = 3e-48 Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 3/193 (1%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR+ER +DD+GT+RIQ+P KGPFYVSPK+IDELI N+G+W Sbjct: 161 LKMLGVKRIERVLPVGTSLTVVGEAAKDDVGTIRIQRPSKGPFYVSPKTIDELIANIGRW 220
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 +RWYK+ S G TV +Y++ HA++Y E A +I Sbjct: 221 ARWYKYASAGLTVLSVYMIANHAVRYILE------------RRRRNELEKRVLAAAAKIS 268
Query: 252 GRD--GHLEDDIFE-PKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLC 82 G+D G ++D + + K + +P+LCVICLEQEYN+VFVPCGHMC CT+CS+ L++CPLC Sbjct: 269 GQDNGGEMDDSLSDGAKRERAMPNLCVICLEQEYNSVFVPCGHMCCCTACSSHLTSCPLC 328
Query: 81 RRRIEQVVRTYRH 43 RR+IE+ V+T+RH Sbjct: 329 RRQIEKAVKTFRH 341
>tr|B8B5A5|B8B5A5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_27112 PE=4 SV=1 Length = 343
Score = 192 bits (487), Expect = 2e-47 Identities = 95/190 (50%), Positives = 122/190 (64%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR ER ++DD+GT+RIQ+PHKGPFYVSPKSID+LI+NLGKW Sbjct: 162 LKMLGVKRTERVLPTGTSLTVVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDQLIMNLGKW 221
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 ++ Y+ S+GF FG++L+ A+++F E E + Sbjct: 222 AKLYQLASMGFAAFGVFLLAKRALQHFLERKRRHELQKRVHAAAAQRQAR-------EAE 274
Query: 252 GRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRR 73 G +G + D K D +V D+CVICLEQEYNAVFVPCGHMC C +CS+ L+NCPLCRRR Sbjct: 275 GGNGTSDVD-SNNKKDQLVLDICVICLEQEYNAVFVPCGHMCCCMNCSSHLTNCPLCRRR 333
Query: 72 IEQVVRTYRH 43 I+Q VRT+RH Sbjct: 334 IDQAVRTFRH 343
>tr|Q8L7N4|Q8L7N4_ARATH Putative RING zinc finger protein (Putative uncharacterized protein At1g63890) OS=Arabidopsis thaliana GN=At1g63890 PE=2 SV=1 Length = 343
Score = 190 bits (483), Expect = 5e-47 Identities = 97/190 (51%), Positives = 117/190 (61%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR+ER V+DD+G RIQKP +GPFYVS KS+D+LI NLGKW Sbjct: 161 LKMLGVKRIERVLPTGIPLTIVGEAVKDDIGEFRIQKPDRGPFYVSSKSLDQLISNLGKW 220
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 SR YK+ S+GFTV G++L+T H I E E + Sbjct: 221 SRLYKYASMGFTVLGVFLITKHVIDSVLERRRRRQLQKRVLDAAAKRAEL-------ESE 273
Query: 252 GRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRR 73 G +G E K + VPDLCVICLEQEYNAVFVPCGHMC CT+CS+ L++CPLCRRR Sbjct: 274 GSNGTRESISDSTKKEDAVPDLCVICLEQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRR 333
Query: 72 IEQVVRTYRH 43 I+ V+TYRH Sbjct: 334 IDLAVKTYRH 343
>tr|A9T6Y2|A9T6Y2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219493 PE=4 SV=1 Length = 352
Score = 188 bits (478), Expect = 2e-46 Identities = 98/192 (51%), Positives = 116/192 (60%), Gaps = 2/192 (1%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKRVER VQDD G +RIQKP KGPFYV+P+S D+LI NLG+W Sbjct: 161 LKMLGVKRVERVLPTGTNLTVVGEAVQDDRGLIRIQKPDKGPFYVTPQSQDQLIENLGRW 220
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 SRW ++MS G T+ G+Y +T+ AIK+ E E D Sbjct: 221 SRWCQYMSFGLTLVGIYFITSRAIKHMLERWRREALLTRVMEAAALRKALQQEGVDEESD 280
Query: 252 GRDGHLEDDIFE--PKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCR 79 G DD K D +P LCVICLEQ+YNAV VPCGHMC CTSCS+QLS CPLCR Sbjct: 281 GVTAFPHDDNAHTAQKKDGGMPSLCVICLEQDYNAVLVPCGHMCCCTSCSSQLSLCPLCR 340
Query: 78 RRIEQVVRTYRH 43 R I+QVV+T+RH Sbjct: 341 RHIDQVVKTFRH 352
>tr|A5BV53|A5BV53_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014293 PE=4 SV=1 Length = 558
Score = 180 bits (456), Expect = 7e-44 Identities = 88/162 (54%), Positives = 107/162 (66%), Gaps = 5/162 (3%) Frame = -2
Query: 534 QDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKWSRWYKFMSLGFTVFGLYLMTTHAIKY 355 +DD+GT+RIQ+PHKGPFYVSPKSID L+ NLGKW+RWY++ SLGFTVFG+YL+ AI+Y Sbjct: 102 KDDVGTIRIQRPHKGPFYVSPKSIDHLVANLGKWARWYRYASLGFTVFGVYLIAKSAIQY 161
Query: 354 FFEXXXXXXXXXXXXXXXXXXXXXXXXXXAG-----EIDGRDGHLEDDIFEPKMDSVVPD 190 E + D +D + D+ K D ++PD Sbjct: 162 VMERKRCWELRKRVLAAASKKSGQDSEVFRSCKCFPDPDEKDENGSDN---TKRDRLMPD 218
Query: 189 LCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRRIEQ 64 LCVICLEQEYNAVFVPCGHMC CT CS+QL+NC LCRRRIEQ Sbjct: 219 LCVICLEQEYNAVFVPCGHMCCCTMCSSQLTNCXLCRRRIEQ 260
>tr|B4FE21|B4FE21_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 331
Score = 166 bits (421), Expect = 8e-40 Identities = 85/190 (44%), Positives = 107/190 (56%) Frame = -2
Query: 612 LKMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKW 433 LKMLGVKR ER T+ ++PHKGPFY S KSID+LI+NLGKW Sbjct: 162 LKMLGVKRTERVLPTGTSL------------TVVGERPHKGPFYASSKSIDQLIVNLGKW 209
Query: 432 SRWYKFMSLGFTVFGLYLMTTHAIKYFFEXXXXXXXXXXXXXXXXXXXXXXXXXXAGEID 253 ++ Y+ S+GF FG++L+ A+++F E G D Sbjct: 210 AKLYRIASMGFATFGVFLLAKRALQHFLERRRRHELQKRVLNAAAQRQAREAEGSKGTSD 269
Query: 252 GRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCRRR 73 K D +V D+CVICLEQEYNAVFVPCGHMC C +CS+ L+NCPLCRRR Sbjct: 270 AEP--------NSKKDQLVLDICVICLEQEYNAVFVPCGHMCCCVACSSHLTNCPLCRRR 321
Query: 72 IEQVVRTYRH 43 I+Q VRT+RH Sbjct: 322 IDQAVRTFRH 331
>tr|Q9SLU0|Q9SLU0_ARATH ZCF61 protein OS=Arabidopsis thaliana GN=ZCF61 PE=2 SV=1 Length = 237
Score = 137 bits (344), Expect = 6e-31 Identities = 76/192 (39%), Positives = 98/192 (51%), Gaps = 3/192 (1%) Frame = -2
Query: 609 KMLGVKRVERXXXXXXXXXXXXXXVQDDLGTLRIQKPHKGPFYVSPKSIDELIINLGKWS 430 K+LGV+ VER V+D +G +RIQKP +GPFYV+ +D+LI LG S Sbjct: 59 KILGVRHVERVVPIGTPLTVVGEAVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLS 118
Query: 429 RWYKFMSLGFTVFGLYLMTTHAIKYFF---EXXXXXXXXXXXXXXXXXXXXXXXXXXAGE 259 R +K+ S+G TV G+ L++ I+Y E G Sbjct: 119 RRFKYASMGLTVLGVILISKPVIEYILKRIEDTLERRRRQFALKRVVDAAARRAKPVTGG 178
Query: 258 IDGRDGHLEDDIFEPKMDSVVPDLCVICLEQEYNAVFVPCGHMCSCTSCSTQLSNCPLCR 79 RDG PDLCV+CL+Q+YN FV CGHMC CT CS QL CPLCR Sbjct: 179 GTSRDGD-------------TPDLCVVCLDQKYNTAFVECGHMCCCTPCSLQLRTCPLCR 225
Query: 78 RRIEQVVRTYRH 43 RI+QV++ YRH Sbjct: 226 ERIQQVLKIYRH 237
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