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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921473
Clone id YMU001_000150_D02
Library
Length 455
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCACCAACAAGCCCAATGCCAATACCTACTCCACATGTAGTCTCTGGAGCACCTTCACC
CACAGTGCCAGCTCACTTAGGTGACTTGACAACATTTTCTCAAGCTATTGGTCAAAACAT
TGCTGAAAATATGCGTAACACGCCTAATAGAGAGCCTAGAAGTAAGGTGGTACAAATACC
AAGCTCACACAAAAATTTAGCGGAGACGGGGATGTGAGGAAGCATATCAAAGTGTTTGAA
CAAATATGCAATTTCCTACGAGAACACAATGACTTGCATAATAGTAATGCTTTAAGTGTC
AGGACAAGGGTAGGACCAGTCTCACTGCCAAGGGCCAGGATGGACATGCAGTCAAGGGGG
TCCCTATATTTAGTAGGCCAAGGGCCTATATAGGGCATGGATGGGTGGATATTAGCATGT
TTAGTCCACATGCCCTTTCATTGGTATCAGAGCTC
■■Homology search results ■■ -
sp_hit_id Q7TUT1
Definition sp|Q7TUT1|GLUQ_PROMM Glutamyl-Q tRNA(Asp) synthetase OS=Prochlorococcus marinus (strain MIT 9313)
Align length 59
Score (bit) 30.8
E-value 2.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921473|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D02.
         (455 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7TUT1|GLUQ_PROMM Glutamyl-Q tRNA(Asp) synthetase OS=Prochlor...    31   2.9  
sp|A2C764|GLUQ_PROM3 Glutamyl-Q tRNA(Asp) synthetase OS=Prochlor...    31   2.9  
sp|Q8H8K7|FH4_ORYSJ Formin-like protein 4 OS=Oryza sativa subsp....    30   3.8  
sp|Q2UDY8|PAN1_ASPOR Actin cytoskeleton-regulatory complex prote...    30   6.4  
sp|Q5TKR9|MYST3_RAT Histone acetyltransferase MYST3 OS=Rattus no...    30   6.4  
sp|A7YSY2|SPA5L_BOVIN Spermatogenesis-associated protein 5-like ...    29   8.4  
sp|Q8BZ21|MYST3_MOUSE Histone acetyltransferase MYST3 OS=Mus mus...    29   8.4  
sp|Q4QY64|ATAD5_MOUSE ATPase family AAA domain-containing protei...    29   8.4  

>sp|Q7TUT1|GLUQ_PROMM Glutamyl-Q tRNA(Asp) synthetase
           OS=Prochlorococcus marinus (strain MIT 9313) GN=gluQ
           PE=3 SV=1
          Length = 306

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 50  APSPTVPAHLGDLTT----FSQAIGQNIAENMRNTPNREPRSKVVQIPSSHKNLAETGM 214
           APSPT P HLG+L T    + QA   N A  +R     +PR++V  + S  ++L   G+
Sbjct: 31  APSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESLQQDLHWLGL 89


>sp|A2C764|GLUQ_PROM3 Glutamyl-Q tRNA(Asp) synthetase
           OS=Prochlorococcus marinus (strain MIT 9303) GN=gluQ
           PE=3 SV=1
          Length = 306

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
 Frame = +2

Query: 50  APSPTVPAHLGDLTT----FSQAIGQNIAENMRNTPNREPRSKVVQIPSSHKNLAETGM 214
           APSPT P HLG+L T    + QA   N A  +R     +PR++V  + S  ++L   G+
Sbjct: 31  APSPTGPLHLGNLCTALVSWLQARLANGAWLLRVDDLDQPRNRVGAVESLQQDLHWLGL 89


>sp|Q8H8K7|FH4_ORYSJ Formin-like protein 4 OS=Oryza sativa subsp.
           japonica GN=FH4 PE=3 SV=1
          Length = 849

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +2

Query: 5   PTSPMPIPTPHVVSGAPSPTVPA----HLGDLTTFSQAIGQNIAENMRNTPNREP 157
           PT+P   P P   + AP P  PA         T FS   G  + + M + P+  P
Sbjct: 274 PTTPAAAPVPAPAAAAPPPAPPAPRSRRTPPRTRFSAGSGAEMNKQMASPPSNPP 328


>sp|Q2UDY8|PAN1_ASPOR Actin cytoskeleton-regulatory complex protein
            pan1 OS=Aspergillus oryzae GN=pan1 PE=3 SV=1
          Length = 1473

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 2    APTSPMPIPTPHVVSGAPSPTVP 70
            AP  P P P PH+   AP P +P
Sbjct: 1404 APPPPPPPPVPHMAPSAPPPGIP 1426


>sp|Q5TKR9|MYST3_RAT Histone acetyltransferase MYST3 OS=Rattus
            norvegicus GN=Myst3 PE=2 SV=2
          Length = 1998

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 4/121 (3%)
 Frame = +2

Query: 2    APTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIP 181
            +P S +P      V    SP++PA     T  S   G   A +M+N     P   V  + 
Sbjct: 1474 SPISSIPSHPSQSVRSVSSPSMPALESGYTQISPEQGSLSAPSMQNM-ETSPMMDVPSVS 1532

Query: 182  SSHKNLAETGM--*GSISKCLNKY--AISYENTMTCIIVML*VSGQG*DQSHCQGPGWTC 349
               + + ++G    GSI      Y    SY++TM   I      G    QS C   G + 
Sbjct: 1533 DHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGSSI-----CGNNSSQSSCSYGGLSS 1587

Query: 350  S 352
            S
Sbjct: 1588 S 1588


>sp|A7YSY2|SPA5L_BOVIN Spermatogenesis-associated protein 5-like
           protein 1 OS=Bos taurus GN=SPATA5L1 PE=2 SV=1
          Length = 767

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 5   PTSPMPIPTPHVVSGAPSPTVPAHL 79
           P +P P+   H+VSGAPSP  PA L
Sbjct: 154 PGAPGPVAALHIVSGAPSPN-PAGL 177


>sp|Q8BZ21|MYST3_MOUSE Histone acetyltransferase MYST3 OS=Mus musculus
            GN=Myst3 PE=1 SV=2
          Length = 2003

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 4/121 (3%)
 Frame = +2

Query: 2    APTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIP 181
            +P S +P      V    SP++PA     T  S   G   A +M+N     P   V  + 
Sbjct: 1475 SPISSIPSHPSQSVRSVNSPSMPALESGYTQISPEQGSLSAPSMQNM-ETSPMMDVPSVS 1533

Query: 182  SSHKNLAETGM--*GSISKCLNKY--AISYENTMTCIIVML*VSGQG*DQSHCQGPGWTC 349
               + + ++G    GSI      Y    SY++TM   I      G    QS C   G + 
Sbjct: 1534 DHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGSSI-----CGNNSSQSSCSYGGLSS 1588

Query: 350  S 352
            S
Sbjct: 1589 S 1589


>sp|Q4QY64|ATAD5_MOUSE ATPase family AAA domain-containing protein 5
            OS=Mus musculus GN=Atad5 PE=1 SV=1
          Length = 1826

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
 Frame = +2

Query: 80   GDLTTFSQAIGQNIAENMRNTPNREPRS-----KVVQIPSSHKNLAETGM*GSISKCLNK 244
            G+L + S A   ++ +N+R   N E ++     K   +P   K LAE      +S CLN 
Sbjct: 1571 GELPSLSPAPSLSVEDNIRRDSNPEIKTQNSGFKPHSVPQPPKTLAEKKCCMLVSHCLNS 1630

Query: 245  YAISYEN 265
             +   EN
Sbjct: 1631 LSEFMEN 1637
tr_hit_id B3R258
Definition tr|B3R258|B3R258_CUPTR Putative uncharacterized protein OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
Align length 58
Score (bit) 37.0
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921473|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D02.
         (455 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3R258|B3R258_CUPTR Putative uncharacterized protein OS=Cupri...    37   0.49 
tr|B0E4D0|B0E4D0_LACBS Predicted protein (Fragment) OS=Laccaria ...    36   1.1  
tr|B0DLK3|B0DLK3_LACBS Predicted protein OS=Laccaria bicolor (st...    36   1.1  
tr|A6GPV3|A6GPV3_9BURK Glutamate--tRNA ligase OS=Limnobacter sp....    35   1.4  
tr|B4QL48|B4QL48_DROSI GD14561 OS=Drosophila simulans GN=GD14561...    35   1.9  
tr|Q0CAS6|Q0CAS6_ASPTN Predicted protein OS=Aspergillus terreus ...    35   1.9  
tr|Q75JS0|Q75JS0_DICDI Similar to Dictyostelium discoideum (Slim...    35   2.4  
tr|B4HIH6|B4HIH6_DROSE GM25548 OS=Drosophila sechellia GN=GM2554...    34   3.2  
tr|B3NCY0|B3NCY0_DROER GG13789 OS=Drosophila erecta GN=GG13789 P...    34   3.2  
tr|A8Q0D0|A8Q0D0_BRUMA Putative uncharacterized protein OS=Brugi...    34   3.2  
tr|Q1AZV3|Q1AZV3_RUBXD Diaminopimelate epimerase OS=Rubrobacter ...    34   4.2  
tr|B2T8Y7|B2T8Y7_BURPP Primase 2 OS=Burkholderia phytofirmans (s...    34   4.2  
tr|A0QV97|A0QV97_MYCS2 NAD-binding protein OS=Mycobacterium smeg...    34   4.2  
tr|B7G1E9|B7G1E9_PHATR Predicted protein OS=Phaeodactylum tricor...    33   5.4  
tr|A0ZE37|A0ZE37_NODSP Dihydrolipoamide acetyltransferase OS=Nod...    33   7.1  
tr|A8JAD8|A8JAD8_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   7.1  
tr|B4P0X9|B4P0X9_DROYA GE19060 OS=Drosophila yakuba GN=GE19060 P...    33   7.1  
tr|A0MVX0|A0MVX0_9ACAR Heme lipoprotein OS=Amblyomma americanum ...    33   7.1  
tr|Q55Z81|Q55Z81_CRYNE Putative uncharacterized protein OS=Crypt...    33   7.1  
tr|Q9TYM8|Q9TYM8_CAEEL Putative uncharacterized protein Y37E11B....    33   9.3  
tr|Q86FM2|Q86FM2_CAEEL Putative uncharacterized protein Y37E11B....    33   9.3  
tr|O00879|O00879_PLABE Merozoite surface protein-1 (Fragment) OS...    33   9.3  
tr|Q5A422|Q5A422_CANAL Potential RNA Pol II transcript 3' end fo...    33   9.3  
tr|Q0CKJ6|Q0CKJ6_ASPTN Putative uncharacterized protein OS=Asper...    33   9.3  

>tr|B3R258|B3R258_CUPTR Putative uncharacterized protein
           OS=Cupriavidus taiwanensis (strain R1 / LMG 19424)
           GN=RALTA_A1590 PE=4 SV=1
          Length = 159

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 19/58 (32%), Positives = 29/58 (50%)
 Frame = +2

Query: 41  VSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPSSHKNLAETGM 214
           +SGAP+P+ PAH G LT +    G ++ ++ + T    P S   Q P        TG+
Sbjct: 60  ISGAPAPSAPAHEGSLTDYHYG-GHSVTQDEKLTGRAHPSSDTSQPPPGPHPYQPTGL 116


>tr|B0E4D0|B0E4D0_LACBS Predicted protein (Fragment) OS=Laccaria
           bicolor (strain S238N-H82) GN=LACBIDRAFT_336087 PE=4
           SV=1
          Length = 475

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = +2

Query: 5   PTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPS 184
           PT P  +P+P    GA +PT      +  T SQ +   +     +TP    R   V +PS
Sbjct: 131 PTVPPALPSPTPSEGASTPTAR----ECPTASQPVSYPMPSE-ESTPAASRRPPTVDMPS 185

Query: 185 SHKNLAETGM*GSIS 229
           SH +L +T   G I+
Sbjct: 186 SHTSLPDTFFQGRIT 200


>tr|B0DLK3|B0DLK3_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_330522 PE=4 SV=1
          Length = 625

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 24/75 (32%), Positives = 35/75 (46%)
 Frame = +2

Query: 5   PTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPS 184
           PT P  +P+P    GA +PT      +  T SQ +   +     +TP    R   V +PS
Sbjct: 285 PTVPPALPSPTPSEGASTPTAR----ECPTASQPVSYPMPSE-ESTPAASRRPPTVDMPS 339

Query: 185 SHKNLAETGM*GSIS 229
           SH +L +T   G I+
Sbjct: 340 SHTSLPDTFFQGRIT 354


>tr|A6GPV3|A6GPV3_9BURK Glutamate--tRNA ligase OS=Limnobacter sp.
          MED105 GN=LMED105_08515 PE=4 SV=1
          Length = 302

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 17 MPIPTPHVVSGAPSPTVPAHLGDLTT 94
          MP P P++   APSPT P HLG L T
Sbjct: 1  MPAPAPYIGRFAPSPTGPLHLGSLAT 26


>tr|B4QL48|B4QL48_DROSI GD14561 OS=Drosophila simulans GN=GD14561
           PE=4 SV=1
          Length = 976

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 14  PMPIP-TPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPSSH 190
           P+P P TP     AP  TVP    DLT  +  +    AE ++ T + +    ++++P   
Sbjct: 292 PIPAPETPPPEQEAPPSTVPNDKADLTMINDVVADIAAERVKKTSSSKGNKMIIKLPMPK 351

Query: 191 K 193
           K
Sbjct: 352 K 352


>tr|Q0CAS6|Q0CAS6_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_09208 PE=4 SV=1
          Length = 851

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 16/61 (26%), Positives = 29/61 (47%)
 Frame = +2

Query: 2   APTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIP 181
           +P S +P+   H + G  +  +P    DL  F  AIG    ++     N  P  ++++IP
Sbjct: 791 SPLSTIPVYVSHNIPGDAAMIIPNRPADLDAFLTAIGSEDTKSRCKASNPNPLGRLIEIP 850

Query: 182 S 184
           +
Sbjct: 851 A 851


>tr|Q75JS0|Q75JS0_DICDI Similar to Dictyostelium discoideum (Slime
           mold). Nucleotide exchange factor RasGEF E (C2H2-type Zn
           finger-containing protein) OS=Dictyostelium discoideum
           GN=DDB_0168784 PE=4 SV=1
          Length = 538

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = +2

Query: 5   PTSPMPIPTPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPS 184
           PT P P+P P   S +P    P ++ + TT +     N   N  N   + P  K   +P 
Sbjct: 312 PTPPKPLPPPTASSSSPPKKSPVNISNTTTTTTTTNNNNNNNSSNP--KTPNGKEGGLPD 369

Query: 185 SHKNLAETGM 214
            + N    G+
Sbjct: 370 LNNNCPVCGI 379


>tr|B4HIH6|B4HIH6_DROSE GM25548 OS=Drosophila sechellia GN=GM25548
           PE=4 SV=1
          Length = 983

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +2

Query: 14  PMPIP-TPHVVSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRNTPNREPRSKVVQIPSSH 190
           P+P P TP     AP  TVP    DLT  +  +    AE ++ T + +    ++++P   
Sbjct: 292 PIPAPETPPPEQEAPPSTVPNDKADLTMTNDVVADIAAERVKKTSSSKGNKMIIKLPMPK 351

Query: 191 K 193
           K
Sbjct: 352 K 352


>tr|B3NCY0|B3NCY0_DROER GG13789 OS=Drosophila erecta GN=GG13789 PE=4
           SV=1
          Length = 1014

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +2

Query: 17  MPIPTPHV-VSGAPSPTVPAHLGDLTTFSQAIGQNIAENMRN-TPNREPRSKVVQIPSSH 190
           MP+PTP + +S A SP  P H G  +  S +  +++ +NMR      + R   + +PS++
Sbjct: 540 MPMPTPRISISQAQSPAKPMHQGQKSNISSSSSEHL-DNMRTFDRGADDRGSSISLPSTN 598


>tr|A8Q0D0|A8Q0D0_BRUMA Putative uncharacterized protein OS=Brugia
           malayi GN=Bm1_40120 PE=4 SV=1
          Length = 200

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 17/49 (34%), Positives = 30/49 (61%)
 Frame = +3

Query: 90  QHFLKLLVKTLLKICVTRLIESLEVRWYKYQAHTKI*RRRGCEEAYQSV 236
           Q  +K   +T++++CVT+L ES+  +W+ Y       +RR  EE Y++V
Sbjct: 2   QTIIKQNTETVIQLCVTKL-ESINDKWFTYTQQIVTMKRREEEEKYKTV 49