BP921475
Clone id YMU001_000150_D04
Library
Length 402
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAAGAGTAAGCGGGGGCCCTGATCCCTCCTGTGTGGAGTCGTGGACTACGGGACAAAGA
ATCCCATCTGACTAGTAAGGGCACGTTAAACACATTCTTCCAAAAGAGAGGAACAACCTT
CACACAAACCAGCGGCAATGAGCCGCAAAGATTGAAACAGGCAACAAAGCTGTCTACAAT
ACTTTGGGCGCTAAATTCTTCCTGCCCCTGTGCGTTGGTGGGCAGTGGGTTGCTTTTGAC
TCGCTTTTCTGTGCAATCCTTCCTAACTAGACAATCACAAAGACTGTCATTCCCCACGCT
CTCCAGCTATTGCCATACTGGTGTACCCACCGGTTTGTCGCTCCACCGCTTTGTGCGGCG
GCTTGTAATCTTCCCTATGACGTCCAAGCTATTATCCTCTCC
■■Homology search results ■■ -
sp_hit_id O35902
Definition sp|O35902|DSG3_MOUSE Desmoglein-3 OS=Mus musculus
Align length 103
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921475|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D04.
(402 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O35902|DSG3_MOUSE Desmoglein-3 OS=Mus musculus GN=Dsg3 PE=2 SV=1 31 2.2
sp|Q29IL2|POMT2_DROPS Protein O-mannosyl-transferase 2 OS=Drosop... 30 4.8

>sp|O35902|DSG3_MOUSE Desmoglein-3 OS=Mus musculus GN=Dsg3 PE=2 SV=1
Length = 993

Score = 30.8 bits (68), Expect = 2.2
Identities = 32/103 (31%), Positives = 42/103 (40%)
Frame = +2

Query: 2 KE*AGALIPPVWSRGLRDKESHLTSKGTLNTFFQKRGTTFTQTSGNEPQRLKQATKLSTI 181
KE +PPV + G ES S+ NT+ GT SG E TKL
Sbjct: 679 KEITNICVPPVTTNGADFMES---SEVCTNTY--AGGTMVEGASGME-----MITKLGGA 728

Query: 182 LWALNSSCPCALVGSGLLLTRFSVQSFLTRQSQRLSFPTLSSY 310
A + PC+L SG + TR S L + ++ L SY
Sbjct: 729 TGATAALGPCSLGYSGTMRTRHSTGGTLKDYAAPVNMTFLGSY 771


>sp|Q29IL2|POMT2_DROPS Protein O-mannosyl-transferase 2
OS=Drosophila pseudoobscura pseudoobscura GN=tw PE=3
SV=1
Length = 749

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1

Query: 199 FLPLCVGGQWVAFDSLFCAILPN*TITKTVIPHALQLLPYWCTH 330
+LP G+ + F F A++ N +T + H +Q LP W H
Sbjct: 659 YLPFWAMGRVLYFHHYFPALIFNSLLTGVMFHHIIQSLPRWIQH 702


tr_hit_id A9HWN0
Definition tr|A9HWN0|A9HWN0_9RHOB Putative uncharacterized protein OS=Roseobacter litoralis Och 149
Align length 68
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921475|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D04.
(402 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9HWN0|A9HWN0_9RHOB Putative uncharacterized protein OS=Roseo... 36 0.85
tr|B0W2V9|B0W2V9_CULQU Putative uncharacterized protein OS=Culex... 35 1.8
tr|Q7Q3N4|Q7Q3N4_ANOGA AGAP007961-PA OS=Anopheles gambiae GN=AGA... 33 5.4
tr|Q5B8Q6|Q5B8Q6_EMENI Putative uncharacterized protein OS=Emeri... 33 5.4
tr|Q1LHV1|Q1LHV1_RALME Major facilitator superfamily MFS_1 OS=Ra... 33 7.0

>tr|A9HWN0|A9HWN0_9RHOB Putative uncharacterized protein
OS=Roseobacter litoralis Och 149 GN=RLO149_07254 PE=4
SV=1
Length = 320

Score = 36.2 bits (82), Expect = 0.85
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = -1

Query: 345 WSDKPVGTPV----WQ*LES--VGNDSLCDCLVRKDCTEKRVKSNPLPTNAQGQEEFSAQ 184
+SD PVG+PV WQ + +G + +C C+ R+D ++ V + T + QE F A
Sbjct: 133 YSDLPVGSPVVETFWQDADHHRIGRNGVCFCIARRDGSKIGVSFSTQDTANKVQEIFYAN 192

Query: 183 SIVDSFVA 160
S +F+A
Sbjct: 193 SYDMNFIA 200


>tr|B0W2V9|B0W2V9_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ001559 PE=4 SV=1
Length = 1805

Score = 35.0 bits (79), Expect = 1.8
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +2

Query: 56 KESHLTSKGTLNTFFQKRGTTFTQTSGN--EPQRLKQATKLSTILWALNSSC-PCALVGS 226
K+ HL L + Q RG G E + L+ A L L L+ P L
Sbjct: 888 KDKHLKQGHLLLSAVQVRGHAMFSNEGRALEEETLEYAWLLEVQLGKLSGKMTPPQLFN- 946

Query: 227 GLLLTRFSVQSFLTRQSQR-LSFPTLSSYCHTGVPTGLSLH 346
++T +FLT S+ L P + YCH G+PT + H
Sbjct: 947 --VITGLETLAFLTLDSENDLKSPKTTRYCHHGIPTNICSH 985


>tr|Q7Q3N4|Q7Q3N4_ANOGA AGAP007961-PA OS=Anopheles gambiae
GN=AGAP007961 PE=4 SV=4
Length = 1727

Score = 33.5 bits (75), Expect = 5.4
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = +2

Query: 56 KESHLTSKGTLNTFFQKRGTTFTQTSGN--EPQRLKQATKLSTILWALNSSCPCALVGSG 229
K+ HL L + Q RG G E + L+ A L L L+ + + +
Sbjct: 860 KDKHLRQGHLLLSAVQVRGHAMFSNEGRQLEEETLEYAWLLEVQLGKLSGKMTLSQLAN- 918

Query: 230 LLLTRFSVQSFLTRQSQR-LSFPTLSSYCHTGVPTGLSLH 346
++T +FLT S+ L P YCH GVP+ H
Sbjct: 919 -VVTGLETLAFLTMDSENELKSPKTVRYCHHGVPSSTCPH 957


>tr|Q5B8Q6|Q5B8Q6_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN3074.2 PE=4 SV=1
Length = 595

Score = 33.5 bits (75), Expect = 5.4
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2

Query: 185 WALN--SSCPCALVGSGLLLTRFSVQSFLTRQSQRLSFPTLSSYC-HTGVPTGLSLHRFV 355
W +N C L L+L R + +FLT + L FPT+ S+C +P LSLH+F
Sbjct: 19 WGVNYHKLCVVGLAPPALILAR--ILTFLTFSTLLLFFPTVISFCLPHPLPPELSLHQFS 76

Query: 356 R 358
R
Sbjct: 77 R 77


>tr|Q1LHV1|Q1LHV1_RALME Major facilitator superfamily MFS_1
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=Rmet_3403 PE=4 SV=1
Length = 461

Score = 33.1 bits (74), Expect = 7.0
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = +2

Query: 68 LTSKGTLNTFFQKRGTTFTQTSGNEPQRLKQATKLSTILWALNSSCPCALVGSGLLLTRF 247
+ SKG+LN R + T TS NE L +AT+ I+ A +G+GL F
Sbjct: 13 VASKGSLNIII--RAMSVTATSANE---LSKATRRRAII--------AATIGNGLEWFDF 59

Query: 248 SVQSFLTRQSQRLSFPT 298
+V SF +L FPT
Sbjct: 60 TVYSFFAVIIAKLFFPT 76