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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921478
Clone id YMU001_000150_D07
Library
Length 592
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAAAAAAAAGCAAGCCCACATATACAAGCGCGTAGAAGCTGAGGACGTGACATTATGTA
CGGAATGCCGGATTTTATGTTGGCTGTTGACATGGCAGATTGTACGGATATCCACATTTT
ATGATATCCACGTTTTATGATATCCACGTTCTATGCTGACTGTTGATGTGGCAGGGCTGT
ACAGATTTTCGTAAAACGTGTTGGTAGCTTTTGGATGCAGCGCTTTGGACTAATGCTTTG
AGTTTACTGCTTTTCATGTAATTGCTTTTGAGGCTAAGGACCTAGGGCTCAGTCTCTGGC
ACGCTTCGGTGAGGAGGTGCAGAGTGCGAGTACCGGCATTGTACTGAGTTCAAGTAATTT
AAAGAAATACCGAAAGGGACGCCAAGGTTTGGGACCAGTACTCTTTGGGGTGGAATTCCG
CTATTCTGCGTTGTGTGTGCTCTCTTTTCAGTTCAATTGTTATTGAAGTGCTAAAAGTCT
ATTCAATCTGTTCTTTACCGTTGGCACATGGTGCCATATGGTGCCTGTTTCATGACAAAA
GGAACGTAGGTGCTTCCATTGTTCAGTCGTAGCTTACATGAAAAAGGATTGT
■■Homology search results ■■ -
sp_hit_id Q6QNK2
Definition sp|Q6QNK2|GP133_HUMAN Probable G-protein coupled receptor 133 OS=Homo sapiens
Align length 48
Score (bit) 32.7
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921478|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D07.
         (592 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6QNK2|GP133_HUMAN Probable G-protein coupled receptor 133 OS...    33   1.4  
sp|Q80T32|GP133_MOUSE Probable G-protein coupled receptor 133 OS...    32   2.4  
sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus...    30   7.0  
sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus mus...    30   7.0  
sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sa...    30   7.0  

>sp|Q6QNK2|GP133_HUMAN Probable G-protein coupled receptor 133
           OS=Homo sapiens GN=GPR133 PE=2 SV=1
          Length = 874

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +3

Query: 378 DAKVWDQYSLGWNSAILRCVCSLFSSIVIEVLKVYSICSLPLAHGAIW 521
           D+K    Y +GW   +L C+ SL  S  ++     + C L LA GAIW
Sbjct: 669 DSKHRYYYGMGWGFPLLICIISL--SFAMDSYGTSNNCWLSLASGAIW 714


>sp|Q80T32|GP133_MOUSE Probable G-protein coupled receptor 133
           OS=Mus musculus GN=Gpr133 PE=2 SV=2
          Length = 903

 Score = 32.0 bits (71), Expect = 2.4
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +3

Query: 378 DAKVWDQYSLGWNSAILRCVCSLFSSIVIEVLKVYSICSLPLAHGAIW 521
           D+K    Y +GW   +L C+ S+ SS  ++       C L L  GAIW
Sbjct: 698 DSKHLYYYGIGWGCPLLICIISISSS--MDSYGTSDSCWLALGSGAIW 743


>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus
           laevis GN=mib1 PE=2 SV=1
          Length = 1011

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 118 NVDIRTICHVNSQHKIRHSVHNVTSSASTRLYM 20
           N D+ T+C+   +H +RH  + +T+  S R+ +
Sbjct: 105 NYDLCTVCYHGDKHHLRHRFYRITTPGSERVLL 137


>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus
           musculus GN=Mib1 PE=1 SV=1
          Length = 1006

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 118 NVDIRTICHVNSQHKIRHSVHNVTSSASTRLYM 20
           N D+ T+C+   +H +RH  + +T+  S R+ +
Sbjct: 105 NYDLCTVCYHGDKHHLRHRFYRITTPGSERVLL 137


>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo
           sapiens GN=MIB1 PE=2 SV=1
          Length = 1006

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 118 NVDIRTICHVNSQHKIRHSVHNVTSSASTRLYM 20
           N D+ T+C+   +H +RH  + +T+  S R+ +
Sbjct: 105 NYDLCTVCYHGDKHHLRHRFYRITTPGSERVLL 137
tr_hit_id B6TUY9
Definition tr|B6TUY9|B6TUY9_MAIZE Chaperone protein dnaJ 49 OS=Zea mays
Align length 107
Score (bit) 37.0
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921478|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_D07.
         (592 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6TUY9|B6TUY9_MAIZE Chaperone protein dnaJ 49 OS=Zea mays PE=...    37   0.83 
tr|B4FPY9|B4FPY9_MAIZE Putative uncharacterized protein OS=Zea m...    37   0.83 
tr|Q57YF9|Q57YF9_9TRYP RNA-binding protein, putative OS=Trypanos...    36   1.4  
tr|B6U4D3|B6U4D3_MAIZE Putative uncharacterized protein OS=Zea m...    35   4.1  
tr|Q6ATR5|Q6ATR5_ORYSJ Os03g0810600 protein OS=Oryza sativa subs...    34   5.4  
tr|Q5N9W6|Q5N9W6_ORYSJ Putative mitochondrial Rho 1 OS=Oryza sat...    34   5.4  
tr|Q0JHT9|Q0JHT9_ORYSJ Os01g0843300 protein OS=Oryza sativa subs...    34   5.4  
tr|B8AC22|B8AC22_ORYSI Putative uncharacterized protein OS=Oryza...    34   5.4  
tr|A3ANX5|A3ANX5_ORYSJ Putative uncharacterized protein OS=Oryza...    34   5.4  
tr|A2ZZH7|A2ZZH7_ORYSJ Putative uncharacterized protein OS=Oryza...    34   5.4  
tr|A2XN85|A2XN85_ORYSI Putative uncharacterized protein OS=Oryza...    34   5.4  
tr|Q5CUX5|Q5CUX5_CRYPV P-type ATpase fused to two adenyl cyclase...    33   9.2  
tr|Q5CH29|Q5CH29_CRYHO Guanylyl cyclase-related OS=Cryptosporidi...    33   9.2  

>tr|B6TUY9|B6TUY9_MAIZE Chaperone protein dnaJ 49 OS=Zea mays PE=2
           SV=1
          Length = 367

 Score = 37.0 bits (84), Expect = 0.83
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
 Frame = -3

Query: 440 AHTTQNSGIPPQRVLVPNLGVPFGISLNYLNSVQCRYS--------HSAPPHRSVPETEP 285
           AH TQ++G  P R+L+  L V   + LN+L S +  YS        H     R VP    
Sbjct: 245 AHGTQSTGGSPVRMLIQLLPVLLLLLLNFLPSSEPVYSLSRSYPYEHKFQTPRGVPYYVK 304

Query: 284 *VLSLKSNYMKSSKLKALVQSAASKSYQHVLRKSVQPCHINSQHRTW 144
            + + +  Y   S  +A V+    + Y  ++    Q C +  Q R W
Sbjct: 305 -MSNFEEQYPHQSTERATVERHVERDYYSII---TQNCRVELQRRQW 347


>tr|B4FPY9|B4FPY9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 370

 Score = 37.0 bits (84), Expect = 0.83
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
 Frame = -3

Query: 440 AHTTQNSGIPPQRVLVPNLGVPFGISLNYLNSVQCRYS--------HSAPPHRSVPETEP 285
           AH TQ++G  P R+L+  L V   + LN+L S +  YS        H     R VP    
Sbjct: 248 AHGTQSTGGSPVRMLIQLLPVLLLLLLNFLPSSEPVYSLSRSYPYEHKFQTPRGVPYYVK 307

Query: 284 *VLSLKSNYMKSSKLKALVQSAASKSYQHVLRKSVQPCHINSQHRTW 144
            + + +  Y   S  +A V+    + Y  ++    Q C +  Q R W
Sbjct: 308 -MSNFEEQYPHQSTERATVERHVERDYYSII---TQNCRVELQRRQW 350


>tr|Q57YF9|Q57YF9_9TRYP RNA-binding protein, putative OS=Trypanosoma
            brucei GN=Tb927.8.710 PE=4 SV=1
          Length = 1377

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
 Frame = -3

Query: 452  TEKRAHTTQNSG-----IPPQRVLVPNLGVPFGISLNYLNSVQCRYSHSAPPHRSVPETE 288
            T   A+ T NS        P    V   G P  IS ++  SV+C   HSA P  S+P  +
Sbjct: 916  TPVNANGTSNSSPGLTYTSPSSHRVTTRGEPMDISSSHDVSVECASPHSATP-VSLPHGD 974

Query: 287  P*VLSLKSNYMKSSKLKALVQSAASKSYQHVLRKSVQPCHINSQHRTWIS 138
                S+   +  SS   +L+Q    +  QH L++  Q  H  SQ R  +S
Sbjct: 975  ASTPSMFFRHCGSSAAMSLIQKQVQQQQQH-LQQQQQQQHRASQVRPQLS 1023


>tr|B6U4D3|B6U4D3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 647

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSAP-PHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 572 IPISVKLRDLNNIFCRIVHAAQLPHLSIPETE 603


>tr|Q6ATR5|Q6ATR5_ORYSJ Os03g0810600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0028F23.7 PE=2 SV=1
          Length = 642

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 567 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 598


>tr|Q5N9W6|Q5N9W6_ORYSJ Putative mitochondrial Rho 1 OS=Oryza sativa
           subsp. japonica GN=P0406G08.27 PE=4 SV=1
          Length = 594

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 519 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 550


>tr|Q0JHT9|Q0JHT9_ORYSJ Os01g0843300 protein OS=Oryza sativa subsp.
           japonica GN=Os01g0843300 PE=4 SV=1
          Length = 597

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 522 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 553


>tr|B8AC22|B8AC22_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04400 PE=4 SV=1
          Length = 618

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 543 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 574


>tr|A3ANX5|A3ANX5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012497 PE=4 SV=1
          Length = 609

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 567 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 598


>tr|A2ZZH7|A2ZZH7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003949 PE=4 SV=1
          Length = 634

 Score = 34.3 bits (77), Expect = 5.4
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 380 VPFGISLNYLNSVQCRYSHSA-PPHRSVPETE 288
           +P  + L  LN++ CR  H+A  PH S+PETE
Sbjct: 559 IPISVRLRDLNNIFCRIVHAAQQPHLSIPETE 590