BP921483 |
Clone id |
YMU001_000150_D12 |
Library |
YMU01 |
Length |
488 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000150_D12. |
Accession |
BP921483 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1232Contig1 |
Sequence |
CGGTCTTGACTTCAATGCAGAGGTAGAGCAATTTTTTGGGGAGAGTCCAATGGTTGCAGG CCCTTCCAGCAAAGATAGGCATAGGAGAAGGACTCGAGAAAGTACACCAGATAGTTATGC TTGGAGTATGGAAGCTCCAGGCTCAACCTCAAGAACTCGTCGTGCGAGACAAAGTCAAGG TAGATCTTTGAGTACCCCTCCTTTCAACAGAGCTAATGAGGCTCCCTCTACAAGTGAGAT TGAGGCATTCTTTCAAGGTGCTGAACAGCAAGAGCGGCGAAGATTTATTGAAAGGTATAA CTTCGATCCTGCGAATGAGAGACCCTTGAGGGGGAGGTATGAATGGACAAACACATAGCG ACTTCACCTTCAGATCAGACGTTTAGAGCTTTCTGGAACATATATCTCATCCAAATCACC CTCAGGACCTTTTCCTGGAAATTTAACCTGTCTAATTGATTTGTGCAAAGATATTCTGCA AGTTAGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GYJ3 |
Definition |
sp|Q8GYJ3|KRP4_ARATH Cyclin-dependent kinase inhibitor 4 OS=Arabidopsis thaliana |
Align length |
42 |
Score (bit) |
66.6 |
E-value |
6.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4F7P5 |
Definition |
tr|B4F7P5|B4F7P5_ARATH At2g32710 OS=Arabidopsis thaliana |
Align length |
42 |
Score (bit) |
66.6 |
E-value |
6.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921483|Adiantum capillus-veneris mRNA, clone: YMU001_000150_D12. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4F7P5|B4F7P5_ARATH At2g32710 OS=Arabidopsis thaliana PE=2 SV=1 67 6e-10 tr|B7E9X8|B7E9X8_ORYSJ cDNA clone:002-118-F09, full insert seque... 65 1e-09 tr|Q8GT29|Q8GT29_SOLLC P27KIP1-related-protein 1 OS=Solanum lyco... 63 8e-09 tr|A7Q761|A7Q761_VITVI Chromosome chr5 scaffold_58, whole genome... 63 8e-09 tr|A5BIR8|A5BIR8_VITVI Putative uncharacterized protein OS=Vitis... 63 8e-09 tr|B7EMP9|B7EMP9_ORYSJ cDNA clone:J033067M05, full insert sequen... 62 1e-08 tr|B8BHF3|B8BHF3_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|B8AMU0|B8AMU0_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|B6U1V6|B6U1V6_MAIZE Cyclin dependent kinase inhibitor OS=Zea ... 62 1e-08 tr|A3CDC8|A3CDC8_ORYSJ Putative uncharacterized protein OS=Oryza... 62 1e-08 tr|A9PER1|A9PER1_POPTR Putative uncharacterized protein OS=Popul... 61 3e-08 tr|Q8GT28|Q8GT28_SOLLC P27KIP1-related-protein 2 OS=Solanum lyco... 60 7e-08 tr|B6TSE9|B6TSE9_MAIZE Cyclin dependent kinase inhibitor OS=Zea ... 60 7e-08 tr|B4FGI1|B4FGI1_MAIZE Putative uncharacterized protein OS=Zea m... 60 7e-08 tr|Q5PXG5|Q5PXG5_EUPES Cyclin dependent kinase inhibitor OS=Euph... 59 9e-08 tr|A2XCA1|A2XCA1_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|Q1KSC3|Q1KSC3_SORBI Putative cyclin-dependent kinase inhibito... 57 6e-07 tr|O48597|O48597_CHERU Cyclin-dependent kinase inhibitor protein... 53 7e-06 tr|Q52PU9|Q52PU9_MAIZE Cyclin-dependent kinase inhibitor 1 OS=Ze... 53 9e-06 tr|B4F986|B4F986_MAIZE Putative uncharacterized protein OS=Zea m... 53 9e-06 tr|A7QAB2|A7QAB2_VITVI Chromosome undetermined scaffold_70, whol... 52 1e-05 tr|Q3SAT8|Q3SAT8_MEDTR Kip-related protein OS=Medicago truncatul... 52 2e-05 tr|Q6T2Z0|Q6T2Z0_SOYBN Cyclin-dependent kinase inhibitor 2;2 (Fr... 51 3e-05 tr|Q9FS28|Q9FS28_PEA Cyclin dependent kinase inhibitor OS=Pisum ... 50 4e-05 tr|Q8GUA2|Q8GUA2_TOBAC Cyclin-dependent kinase inhibitor OS=Nico... 50 7e-05 tr|Q6T2Z3|Q6T2Z3_SOYBN Cyclin-dependent kinase inhibitor 1;1 OS=... 50 7e-05 tr|B7EU31|B7EU31_ORYSJ cDNA clone:J033118G18, full insert sequen... 50 7e-05 tr|A6QRA0|A6QRA0_ARATH At3g19150 OS=Arabidopsis thaliana PE=2 SV=1 50 7e-05 tr|Q93V92|Q93V92_NICTO CDK/cyclin inhibitor OS=Nicotiana tomento... 49 2e-04 tr|Q6T2Z2|Q6T2Z2_SOYBN Cyclin-dependent kinase inhibitor 1;2 OS=... 48 2e-04
>tr|B4F7P5|B4F7P5_ARATH At2g32710 OS=Arabidopsis thaliana PE=2 SV=1 Length = 289
Score = 66.6 bits (161), Expect = 6e-10 Identities = 25/42 (59%), Positives = 37/42 (88%) Frame = +2
Query: 224 PSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEWT 349 P+T E++ FF GAE++++++FIE+YNFDP NE+PL GR+EWT Sbjct: 244 PTTPEMDEFFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWT 285
>tr|B7E9X8|B7E9X8_ORYSJ cDNA clone:002-118-F09, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 221
Score = 65.5 bits (158), Expect = 1e-09 Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 2/116 (1%) Frame = +2
Query: 8 DFNAEVEQFFGESPMVAGPSSKDRHRRRTRESTPDSYAWSME--APXXXXXXXXXXXXXX 181 +F AEVE FG++ + D R TRE+TP S S E + Sbjct: 108 EFEAEVEVSFGDNVL---DLDGDAMERSTRETTPCSLIRSSEMISTPGSTTKTNTSISSR 164
Query: 182 XXLSTPPFNRANEAPSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEWT 349 + T + PS+ E+E FF AEQQ+ + F ERYNF P N+ PL GRYEWT Sbjct: 165 RRMET---SVCRYVPSSLEMEEFFAAAEQQQHQAFRERYNFCPVNDCPLPGRYEWT 217
>tr|Q8GT29|Q8GT29_SOLLC P27KIP1-related-protein 1 OS=Solanum lycopersicum GN=krp1 PE=2 SV=1 Length = 210
Score = 62.8 bits (151), Expect = 8e-09 Identities = 25/41 (60%), Positives = 34/41 (82%) Frame = +2
Query: 224 PSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 P+ E+E FF AE++++R+FIE+YNFDP NE+PL GRYEW Sbjct: 165 PTDLEMEEFFTRAEKEQQRKFIEKYNFDPVNEKPLPGRYEW 205
>tr|A7Q761|A7Q761_VITVI Chromosome chr5 scaffold_58, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00031701001 PE=4 SV=1 Length = 263
Score = 62.8 bits (151), Expect = 8e-09 Identities = 23/47 (48%), Positives = 36/47 (76%) Frame = +2
Query: 206 NRANEAPSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 +R P+T E++ FFQ AE++++R F ++YNFDP N++PL GR+EW Sbjct: 212 SRQGHVPTTQEMDQFFQSAEEEQQRVFTDKYNFDPVNDKPLSGRFEW 258
>tr|A5BIR8|A5BIR8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012042 PE=4 SV=1 Length = 252
Score = 62.8 bits (151), Expect = 8e-09 Identities = 23/47 (48%), Positives = 36/47 (76%) Frame = +2
Query: 206 NRANEAPSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 +R P+T E++ FFQ AE++++R F ++YNFDP N++PL GR+EW Sbjct: 201 SRQGHVPTTQEMDQFFQSAEEEQQRVFTDKYNFDPVNDKPLSGRFEW 247
>tr|B7EMP9|B7EMP9_ORYSJ cDNA clone:J033067M05, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 194
Score = 62.4 bits (150), Expect = 1e-08 Identities = 38/111 (34%), Positives = 55/111 (49%) Frame = +2
Query: 14 NAEVEQFFGESPMVAGPSSKDRHRRRTRESTPDSYAWSMEAPXXXXXXXXXXXXXXXXLS 193 +AE E FG ++ + R TRE+TP S + Sbjct: 85 SAEAEVSFGGENVL----ELEAMERNTRETTPCSLIRDPDTISTPGSTTRRSHSSSHCKV 140
Query: 194 TPPFNRANEAPSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 P R N P+++E+EAFF EQ++R+ FI++YNFDP N+ PL GR+EW Sbjct: 141 QTPV-RHNIIPASAELEAFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEW 190
>tr|B8BHF3|B8BHF3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34000 PE=4 SV=1 Length = 242
Score = 62.0 bits (149), Expect = 1e-08 Identities = 25/46 (54%), Positives = 36/46 (78%) Frame = +2
Query: 209 RANEAPSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 R N P+++E+EAFF EQ++R+ FI++YNFDP N+ PL GR+EW Sbjct: 193 RHNIIPASAELEAFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEW 238
>tr|B8AMU0|B8AMU0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09906 PE=4 SV=1 Length = 240
Score = 62.0 bits (149), Expect = 1e-08 Identities = 28/45 (62%), Positives = 34/45 (75%) Frame = +2
Query: 221 APSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEWTNT 355 +P +EIEAFF AE ERRRF E+YN+D A +RPL+GRYEW T Sbjct: 183 SPPEAEIEAFFAAAELAERRRFAEKYNYDIALDRPLQGRYEWEPT 227
>tr|B6U1V6|B6U1V6_MAIZE Cyclin dependent kinase inhibitor OS=Zea mays PE=2 SV=1 Length = 212
Score = 62.0 bits (149), Expect = 1e-08 Identities = 43/115 (37%), Positives = 53/115 (46%), Gaps = 6/115 (5%) Frame = +2
Query: 20 EVEQFFGESPMVAGPSSKDRHRRRTRESTPDSYAWSMEAPXXXXXXXXXXXXXXXXLSTP 199 EVE FG++ + D R TRE+TP S + P ST Sbjct: 101 EVEVSFGDNVL-----DLDTMERSTRETTPCSL---IRNPEMISTPGSTTKSKTSSNSTT 152
Query: 200 PFNRANEAPS------TSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEW 346 R E PS + E+E FF AEQQE+ F E+YNF P N+ PL GRYEW Sbjct: 153 SRRRTEETPSCRFIPSSLEMEEFFSAAEQQEQHSFREKYNFCPVNDCPLPGRYEW 207
>tr|A3CDC8|A3CDC8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033300 PE=4 SV=1 Length = 110
Score = 62.0 bits (149), Expect = 1e-08 Identities = 28/45 (62%), Positives = 34/45 (75%) Frame = +2
Query: 221 APSTSEIEAFFQGAEQQERRRFIERYNFDPANERPLRGRYEWTNT 355 +P +EIEAFF AE ERRRF E+YN+D A +RPL+GRYEW T Sbjct: 53 SPPEAEIEAFFAAAELAERRRFAEKYNYDIALDRPLQGRYEWEPT 97
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