BP921485 |
Clone id |
YMU001_000150_E02 |
Library |
YMU01 |
Length |
505 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000150_E02. |
Accession |
BP921485 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCAGCAACTCCTGCCGAGTGGAATCTTGCACAAGGTATCTTACTTGCAATGTGATAGGCC AACATTTCAGGATTTCTGACCATGTTGTATATGGTTGGAAGCTGAACCACTTGCTGCCAT AAATCTGCTGCACGTTGAGCAAGATAATAGGCATCATGCATCCGGTATACCCAATGGGGC CATGCAGAACATTGTGGCATAGATAGGCACTTAGATGCATCCAGCACCCACCTTTTCCGA AACCCCCCTCTTCTGTCAAAACTGCTCTCCTCTCTCTGAGAGCAGTCGTGGATGGGATAA TCATCGTTATCATGTGTTTGCCTTGCATGGGCTGCTCTGTGGTCTGTTTTCTCTTGTCTT GGCCTGTAATGCTGGGCTTCAACCTCTCCTTGAACAACCCCAATGCCCCAATTCTCCCCA GCATGATGGACACCCCTCAAACATTGCGTAGCTTCATGAGCCACAGAATTGAGCTCTCTC AAGTGTTTAGGTTCTTCTCTCTTCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8IV16 |
Definition |
sp|Q8IV16|HDBP1_HUMAN Glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 OS=Homo sapiens |
Align length |
58 |
Score (bit) |
32.7 |
E-value |
0.98 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NXX2 |
Definition |
tr|A9NXX2|A9NXX2_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
95 |
Score (bit) |
94.7 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921485|Adiantum capillus-veneris mRNA, clone: YMU001_000150_E02. (505 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NXX2|A9NXX2_PICSI Putative uncharacterized protein OS=Picea... 95 2e-18 tr|A9SL34|A9SL34_PHYPA Predicted protein OS=Physcomitrella paten... 85 9e-16 tr|A9T7Y8|A9T7Y8_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15 tr|A9TFB0|A9TFB0_PHYPA Predicted protein OS=Physcomitrella paten... 84 3e-15 tr|A9SCP9|A9SCP9_PHYPA Predicted protein (Fragment) OS=Physcomit... 82 6e-15 tr|A7P4B8|A7P4B8_VITVI Chromosome chr4 scaffold_6, whole genome ... 75 2e-12 tr|Q8VXV2|Q8VXV2_ARATH At2g5740/F3N11.19 OS=Arabidopsis thaliana... 74 3e-12 tr|Q5E916|Q5E916_ARATH At2g25740 OS=Arabidopsis thaliana PE=2 SV=1 74 3e-12 tr|Q5JKW4|Q5JKW4_ORYSJ cDNA clone:J033090F18, full insert sequen... 72 2e-11 tr|B8A9D9|B8A9D9_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|A2ZXQ3|A2ZXQ3_ORYSJ Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|O82323|O82323_ARATH Putative uncharacterized protein At2g2574... 70 4e-11 tr|B4FF98|B4FF98_MAIZE Putative uncharacterized protein OS=Zea m... 70 4e-11 tr|A9TB63|A9TB63_PHYPA Predicted protein (Fragment) OS=Physcomit... 69 9e-11 tr|Q53WM9|Q53WM9_ORYSJ Os05g0521500 protein OS=Oryza sativa subs... 68 3e-10 tr|B8B010|B8B010_ORYSI Putative uncharacterized protein OS=Oryza... 68 3e-10 tr|A3B5Z1|A3B5Z1_ORYSJ Putative uncharacterized protein OS=Oryza... 68 3e-10 tr|A9TEK0|A9TEK0_PHYPA Predicted protein OS=Physcomitrella paten... 65 1e-09 tr|B8A1E4|B8A1E4_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|Q2HB65|Q2HB65_CHAGB Putative uncharacterized protein OS=Chaet... 35 1.5 tr|A2DAQ7|A2DAQ7_TRIVA Clan SB, family S8, subtilisin-like serin... 35 1.6 tr|Q2CFC7|Q2CFC7_9RHOB Probable aminotransferase OS=Oceanicola g... 35 2.1 tr|Q6TYQ7|Q6TYQ7_MIOTA Sperm ion channel (Fragment) OS=Miopithec... 35 2.6 tr|A8JAV9|A8JAV9_CHLRE Predicted protein OS=Chlamydomonas reinha... 34 3.4 tr|A9GI63|A9GI63_SORC5 Alpha amylase, catalytic region OS=Sorang... 34 4.5 tr|A1ZW22|A1ZW22_9SPHI Protein tyrosine kinase OS=Microscilla ma... 33 5.8 tr|Q9W7A6|Q9W7A6_COTJA Fast troponin T isoform (Fragment) OS=Cot... 33 7.6 tr|A8P7V8|A8P7V8_COPC7 Putative uncharacterized protein OS=Copri... 33 7.6 tr|A8N5E8|A8N5E8_COPC7 Putative uncharacterized protein OS=Copri... 33 7.6 tr|A7L4I9|A7L4I9_HBV S protein OS=Hepatitis B virus GN=S PE=4 SV=1 33 7.8
>tr|A9NXX2|A9NXX2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 475
Score = 94.7 bits (234), Expect = 2e-18 Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%) Frame = -3
Query: 314 HDNDDYPIHDCSQREESSFDRR-GGFRKRWVLDASKCLSMPQCSAWPHWVYRMHDAYYLA 138 +DN D +R++SS D GG K W D SK + QCSAWPHWVYRM+DAY LA Sbjct: 342 NDNRDGGDSPLLERKQSSNDGGWGGAGKAWAADESKWIYRAQCSAWPHWVYRMYDAYNLA 401
Query: 137 QRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 +RAAD+ +Q+++L + ++V PE+L+++IASKIP Sbjct: 402 RRAADMCRQMLELHIMDDLVNKPELLSFYIASKIP 436
>tr|A9SL34|A9SL34_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_131517 PE=4 SV=1 Length = 502
Score = 84.7 bits (208), Expect(2) = 9e-16 Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 10/102 (9%) Frame = -3
Query: 308 NDDYPIHDCSQREESSF-------DRRGGFR---KRWVLDASKCLSMPQCSAWPHWVYRM 159 N D P+H C + R GG+ K W DA K QC+AWPHWVYR Sbjct: 264 NVDQPMHSCESSAVGNGLVTGVKRPREGGWGAACKAWATDARKWRHKAQCTAWPHWVYRQ 323
Query: 158 HDAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 DAY LA+RAAD+ +Q+ LP + MV P L+Y+IAS +P Sbjct: 324 FDAYDLARRAADMLRQMADLPRMEAMVHTPSQLSYYIASNMP 365
Score = 21.6 bits (44), Expect(2) = 9e-16 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1
Query: 31 VQDSTRQELL 2 +QDSTRQELL Sbjct: 366 LQDSTRQELL 375
>tr|A9T7Y8|A9T7Y8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141639 PE=4 SV=1 Length = 493
Score = 84.3 bits (207), Expect(2) = 3e-15 Identities = 39/73 (53%), Positives = 50/73 (68%) Frame = -3
Query: 251 RGGFRKRWVLDASKCLSMPQCSAWPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRN 72 RGG K W DA K Q SAWP+WVYR DAY LA+RAAD+ +Q+ +LP + MVR Sbjct: 284 RGGCWKAWAADAGKWRCKAQRSAWPYWVYRQFDAYDLARRAADMLRQMAELPRVEAMVRT 343
Query: 71 PEMLAYHIASKIP 33 P +L+Y+IAS +P Sbjct: 344 PSLLSYYIASNMP 356
Score = 20.4 bits (41), Expect(2) = 3e-15 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1
Query: 31 VQDSTRQELL 2 +QD+TRQELL Sbjct: 357 LQDATRQELL 366
>tr|A9TFB0|A9TFB0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_144690 PE=4 SV=1 Length = 468
Score = 84.3 bits (207), Expect(2) = 3e-15 Identities = 40/73 (54%), Positives = 50/73 (68%) Frame = -3
Query: 251 RGGFRKRWVLDASKCLSMPQCSAWPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRN 72 RGG K W DA K Q SAWPHWVYR DAY LA+RAAD+ +Q+ +LP + MVR Sbjct: 259 RGGCCKAWGTDAGKWRYRAQRSAWPHWVYRQFDAYDLARRAADMLRQMAELPRMEAMVRT 318
Query: 71 PEMLAYHIASKIP 33 P +L+Y+IAS +P Sbjct: 319 PSLLSYYIASNMP 331
Score = 20.4 bits (41), Expect(2) = 3e-15 Identities = 8/10 (80%), Positives = 10/10 (100%) Frame = -1
Query: 31 VQDSTRQELL 2 +QD+TRQELL Sbjct: 332 LQDATRQELL 341
>tr|A9SCP9|A9SCP9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42418 PE=4 SV=1 Length = 461
Score = 82.0 bits (201), Expect(2) = 6e-15 Identities = 42/110 (38%), Positives = 58/110 (52%) Frame = -3
Query: 362 PRQEKTDHRAAHARQTHDNDDYPIHDCSQREESSFDRRGGFRKRWVLDASKCLSMPQCSA 183 P E+ D ++A QT + + + G K W DA K QC+ Sbjct: 216 PEDERMDALLSNADQTMHGGESSGGQVAGVKRPREGGWGAACKAWATDAGKWRHRAQCTP 275
Query: 182 WPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 WPHWVYR DAY LA+RAAD+ +Q+ +LP + MV P L+Y+IAS +P Sbjct: 276 WPHWVYRQFDAYDLARRAADMLRQMAELPRMETMVHTPSQLSYYIASNMP 325
Score = 21.6 bits (44), Expect(2) = 6e-15 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = -1
Query: 31 VQDSTRQELL 2 +QDSTRQELL Sbjct: 326 LQDSTRQELL 335
>tr|A7P4B8|A7P4B8_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032093001 PE=4 SV=1 Length = 548
Score = 75.1 bits (183), Expect = 2e-12 Identities = 28/50 (56%), Positives = 43/50 (86%) Frame = -3
Query: 182 WPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 WP+WVYRM+D+Y+LAQRAA +W+Q+V P++ +V+ P++L++HI SKIP Sbjct: 362 WPYWVYRMYDSYHLAQRAAGMWKQIVGAPSMDELVKKPDLLSFHIGSKIP 411
>tr|Q8VXV2|Q8VXV2_ARATH At2g5740/F3N11.19 OS=Arabidopsis thaliana PE=2 SV=1 Length = 547
Score = 74.3 bits (181), Expect = 3e-12 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%) Frame = -3
Query: 317 THDNDDYPIHDC------SQREESSFDRRGGFRKRWVLDASKCLSMPQCSAWPHWVYRMH 156 +HDN++ SQ + +R FR+ D S+ P+ + WP W YRM Sbjct: 313 SHDNENEDEQSAIGKTPVSQEKYQKQNRLASFRQN--TDLSRFRMTPR-AFWPFWAYRMF 369
Query: 155 DAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 D+YYLAQRA DLW+Q+V +P + V P++L++ IASKIP Sbjct: 370 DSYYLAQRAVDLWKQIVGVPNMEAFVNKPDILSFSIASKIP 410
>tr|Q5E916|Q5E916_ARATH At2g25740 OS=Arabidopsis thaliana PE=2 SV=1 Length = 547
Score = 74.3 bits (181), Expect = 3e-12 Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 6/101 (5%) Frame = -3
Query: 317 THDNDDYPIHDC------SQREESSFDRRGGFRKRWVLDASKCLSMPQCSAWPHWVYRMH 156 +HDN++ SQ + +R FR+ D S+ P+ + WP W YRM Sbjct: 313 SHDNENEDEQSAIGKTPVSQEKYQKQNRLASFRQN--TDLSRFRMTPR-AFWPFWAYRMF 369
Query: 155 DAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASKIP 33 D+YYLAQRA DLW+Q+V +P + V P++L++ IASKIP Sbjct: 370 DSYYLAQRAVDLWKQIVGVPNMEAFVNKPDILSFSIASKIP 410
>tr|Q5JKW4|Q5JKW4_ORYSJ cDNA clone:J033090F18, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.35 PE=2 SV=1 Length = 535
Score = 71.6 bits (174), Expect = 2e-11 Identities = 30/62 (48%), Positives = 43/62 (69%) Frame = -3
Query: 218 ASKCLSMPQCSAWPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASK 39 +SK S WP W Y M+D+Y LA+R ADLW+Q+V P++ + VR P++L+YHI SK Sbjct: 340 SSKLALQAPLSFWPRWAYEMYDSYSLARRVADLWRQIVVNPSMDDYVRKPDILSYHIGSK 399
Query: 38 IP 33 +P Sbjct: 400 LP 401
>tr|B8A9D9|B8A9D9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03699 PE=4 SV=1 Length = 535
Score = 71.6 bits (174), Expect = 2e-11 Identities = 30/62 (48%), Positives = 43/62 (69%) Frame = -3
Query: 218 ASKCLSMPQCSAWPHWVYRMHDAYYLAQRAADLWQQVVQLPTIYNMVRNPEMLAYHIASK 39 +SK S WP W Y M+D+Y LA+R ADLW+Q+V P++ + VR P++L+YHI SK Sbjct: 340 SSKLALQAPLSFWPRWAYEMYDSYSLARRVADLWRQIVVNPSMDDYVRKPDILSYHIGSK 399
Query: 38 IP 33 +P Sbjct: 400 LP 401
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