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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921488
Clone id YMU001_000150_E07
Library
Length 471
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGAAAAGGCTGGACCCCTT
GCATGGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTTCCACGGCAGCGGCTACT
ACGATGGGCGGTACTGGGTGATGTGGAAGCTGCACATGTTTGGCTGCCAAGATGCCGCTG
CTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGC
TGGGCTTTGACGCTAAGAGGCAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTG
TCTAAACTTTCTTAAAGCAAGCCAATTTAGTTGGCATGAATGCCTGCTTCCCATTTCCCA
CTGGCGCCTAACAAGCTTGCTCTTATGAGCTTTTGTGTCCCAGCCACTTTGCATACATAA
TGAAACAACTTCCCAGTGGTGGCTTCACTGCTTAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 99
Score (bit) 138.0
E-value 1.0e-32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921488|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_E07.
         (453 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   138   1e-32
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   136   5e-32
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   134   2e-31
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   133   3e-31
sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chai...   133   3e-31
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   133   3e-31
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   133   3e-31
sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small cha...   133   4e-31
sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small cha...   133   4e-31
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   132   5e-31
sp|P07398|RBS3_WHEAT Ribulose bisphosphate carboxylase small cha...   132   5e-31
sp|O24634|RBS1_FRIAG Ribulose bisphosphate carboxylase small cha...   132   9e-31
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   132   9e-31
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   131   2e-30
sp|P18566|RBS2_ORYSJ Ribulose bisphosphate carboxylase small cha...   130   2e-30
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   130   2e-30
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   130   2e-30
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   130   3e-30
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   130   3e-30
sp|O22645|RBS5_FRIAG Ribulose bisphosphate carboxylase small cha...   130   3e-30
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   130   3e-30
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   130   3e-30
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   130   3e-30
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   129   6e-30
sp|Q39745|RBS3_FLAPR Ribulose bisphosphate carboxylase small cha...   129   6e-30

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  138 bits (347), Expect = 1e-32
 Identities = 59/99 (59%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFD-KIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAA 179
           S E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKL MFGC D+A
Sbjct: 79  SDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSA 138

Query: 180 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
            V++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 139 QVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
          Length = 182

 Score =  136 bits (342), Expect = 5e-32
 Identities = 60/99 (60%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFD-KIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAA 179
           SSEQ+AK+VD+++RK   PC+EF+ + G VYREH    GYYDGRYW MWKL MFGC D++
Sbjct: 81  SSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSS 140

Query: 180 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
            VL+E+ EC K YP AFIR++GFD KRQVQ+  F+  KP
Sbjct: 141 QVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  134 bits (337), Expect = 2e-31
 Identities = 55/96 (57%), Positives = 73/96 (76%)
 Frame = +3

Query: 9   EQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAAVL 188
           EQ+ ++VD+++R GW PC+EF K+G VYRE+ +  GYYDGRYW MWKL MFGC D++ VL
Sbjct: 80  EQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVL 139

Query: 189 REIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           +E+ EC+K YP+ F R++GFD  RQVQ   FL  KP
Sbjct: 140 KEVDECSKAYPDYFNRIIGFDNTRQVQCISFLTYKP 175


>sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small chain
           PWS4.3, chloroplastic OS=Triticum aestivum PE=3 SV=2
          Length = 174

 Score =  134 bits (336), Expect = 2e-31
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S+E ++KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MWKL MFGC DA  
Sbjct: 68  STEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQ 127

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 128 VLNEVEEVKKEYPDAYVRVIGFDNLRQVQCVSFIAFRP 165


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  133 bits (335), Expect = 3e-31
 Identities = 55/98 (56%), Positives = 71/98 (72%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S+E + KQVD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKL MFGC DA  
Sbjct: 68  STEALLKQVDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQ 127

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VL E+ E  KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 128 VLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P08474|RBS_CUCSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Cucumis sativus GN=RBCS PE=2 SV=1
          Length = 189

 Score =  133 bits (335), Expect = 3e-31
 Identities = 62/106 (58%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGS--VYREHFHGSGYYDGRYWVMWKLHMFGCQDA 176
           S+EQ++K+ D+++R GW PC+EFD IGS  VYRE+    G+YDGRYW MWKL MFGC D+
Sbjct: 81  SNEQLSKECDYLLRNGWVPCVEFD-IGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDS 139

Query: 177 AAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV*TFL 314
           + V++EI E  KEYP+AFIRV+GFD  RQVQ   F+  KP V  FL
Sbjct: 140 SQVIQEIEEAKKEYPDAFIRVIGFDNVRQVQCISFIAYKPQVLLFL 185


>sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small chain
           PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1
          Length = 175

 Score =  133 bits (335), Expect = 3e-31
 Identities = 56/98 (57%), Positives = 71/98 (72%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S+E + KQVD+++R  W PC+EF K+G V+REH    GYYDGRYW MWKL MFGC DA  
Sbjct: 69  STEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQ 128

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VL E+ E  KEYP+A++RV+GFD  RQVQ   F+  +P
Sbjct: 129 VLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRP 166


>sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1
          Length = 180

 Score =  133 bits (335), Expect = 3e-31
 Identities = 57/100 (57%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKI-GSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAA 179
           +++Q+A+QVD+++   W PC+EF+   G VYREH +  GYYDGRYW MWKL MFGC D A
Sbjct: 79  TTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPA 138

Query: 180 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
            VL E+ EC KEYP AFIR++GFD+ RQVQ   F+  KP+
Sbjct: 139 QVLNELEECKKEYPNAFIRIIGFDSNRQVQCVSFIAYKPA 178


>sp|O22573|RBS3_FRIAG Ribulose bisphosphate carboxylase small chain
           3, chloroplastic OS=Fritillaria agrestis GN=RBCS3 PE=2
           SV=1
          Length = 179

 Score =  133 bits (334), Expect = 4e-31
 Identities = 58/98 (59%), Positives = 72/98 (73%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKL MFGC DAA 
Sbjct: 81  SVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQ 140

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           V++E AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 141 VVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178


>sp|O22572|RBS2_FRIAG Ribulose bisphosphate carboxylase small chain
           2, chloroplastic OS=Fritillaria agrestis GN=RBCS2 PE=2
           SV=1
          Length = 179

 Score =  133 bits (334), Expect = 4e-31
 Identities = 58/98 (59%), Positives = 72/98 (73%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S E + KQ+++++R GW PC+EF   G V R++    GYYDGRYW MWKL MFGC DAA 
Sbjct: 81  SVESLLKQIEYLIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQ 140

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           V++E AEC KEYP AFIRV+GFD  RQVQ   F+V+KP
Sbjct: 141 VVKEAAECKKEYPAAFIRVIGFDNVRQVQCVSFIVEKP 178
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 99
Score (bit) 186.0
E-value 4.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921488|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_E07.
         (453 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   186   4e-46
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   140   3e-32
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   139   9e-32
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   139   9e-32
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   138   2e-31
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   137   2e-31
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza...   137   3e-31
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A3A381|A3A381_ORYSJ Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   135   8e-31
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   135   1e-30
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q9ZRS6|Q9ZRS6_SECCE Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   134   2e-30
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   134   3e-30
tr|O20253|O20253_SPIOL Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c...   133   4e-30
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWH1|Q9ZWH1_AEGSE Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWG8|Q9ZWG8_TRITU Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWG7|Q9ZWG7_SECCE Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWG5|Q9ZWG5_9POAL Ribulose bisphosphate carboxylase small c...   133   5e-30
tr|Q9ZWG4|Q9ZWG4_AVESA Ribulose bisphosphate carboxylase small c...   133   5e-30

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  186 bits (473), Expect = 4e-46
 Identities = 83/99 (83%), Positives = 94/99 (94%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           +++QIAKQV++MVRKGWTPC+EFD IGSVYREHFHGSGYYDGRYW+MWKL MFGC D+ +
Sbjct: 75  TNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGS 134

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
           VLREIAECAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS
Sbjct: 135 VLREIAECAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  140 bits (353), Expect = 3e-32
 Identities = 59/99 (59%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFD-KIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAA 179
           S E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKL MFGC D+A
Sbjct: 79  SDEALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSA 138

Query: 180 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
            V++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 139 QVMKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  139 bits (349), Expect = 9e-32
 Identities = 62/102 (60%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHG---SGYYDGRYWVMWKLHMFGCQD 173
           + +QIAKQVDFM+++   PC+EFD +GSV R +F G   SGYYDGRYW MWKL MFGC D
Sbjct: 78  TDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTD 137

Query: 174 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
           +A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 138 SAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  139 bits (349), Expect = 9e-32
 Identities = 62/102 (60%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHG---SGYYDGRYWVMWKLHMFGCQD 173
           + +QIAKQVDFM+++   PC+EFD +GSV R +F G   SGYYDGRYW MWKL MFGC D
Sbjct: 78  TDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTD 137

Query: 174 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
           +A VLREI EC + +P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 138 SAQVLREIQECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  138 bits (347), Expect = 2e-31
 Identities = 58/99 (58%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFD-KIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAA 179
           + EQ++K+VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKL MFGC D++
Sbjct: 80  TQEQLSKEVDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSS 139

Query: 180 AVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
            VL+E+ EC KEYP A+IR++GFD  RQVQ   F+  KP
Sbjct: 140 QVLKEVEECKKEYPNAYIRIIGFDNVRQVQCISFIAFKP 178


>tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small
           chain OS=Populus trichocarpa PE=2 SV=1
          Length = 170

 Score =  137 bits (346), Expect = 2e-31
 Identities = 58/98 (59%), Positives = 74/98 (75%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S + IAK++D+M++KGW PC+EFD++GSV REH    GYYDGRYW +WKL MFGC D++ 
Sbjct: 71  SEDSIAKEIDYMMKKGWIPCLEFDEVGSVRREHSRMPGYYDGRYWTLWKLPMFGCTDSSQ 130

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VL EI EC K YP+A+IR L FD K Q Q   F++QKP
Sbjct: 131 VLEEIHECKKAYPDAYIRCLAFDNKHQGQCMAFVIQKP 168


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  137 bits (345), Expect = 3e-31
 Identities = 60/102 (58%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHG---SGYYDGRYWVMWKLHMFGCQD 173
           + +QIAKQVD+M+++   PC+EFD +GSV R +F G   SGYYDGRYW MWKL MFGC D
Sbjct: 113 TDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTD 172

Query: 174 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
           ++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 173 SSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q67IU5|Q67IU5_ORYSJ Ribulose bisphosphate carboxylase small
           chain OS=Oryza sativa subsp. japonica GN=P0463E12.1 PE=3
           SV=1
          Length = 183

 Score =  137 bits (345), Expect = 3e-31
 Identities = 56/98 (57%), Positives = 76/98 (77%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKL MFGC DAAA
Sbjct: 72  SAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAA 131

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VLRE+ EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 132 VLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|B8AHT7|B8AHT7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05882 PE=4 SV=1
          Length = 183

 Score =  137 bits (345), Expect = 3e-31
 Identities = 56/98 (57%), Positives = 76/98 (77%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHGSGYYDGRYWVMWKLHMFGCQDAAA 182
           S++ I+K+++F++ KGW PC+EFDK G ++R +    GYYDGRYW +WKL MFGC DAAA
Sbjct: 72  SAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAA 131

Query: 183 VLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 296
           VLRE+ EC +EYP+AFIR++ FD+ RQ Q   F+V KP
Sbjct: 132 VLREVEECRREYPDAFIRLIAFDSSRQCQCMSFVVHKP 169


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  137 bits (345), Expect = 3e-31
 Identities = 60/102 (58%), Positives = 80/102 (78%), Gaps = 3/102 (2%)
 Frame = +3

Query: 3   SSEQIAKQVDFMVRKGWTPCMEFDKIGSVYREHFHG---SGYYDGRYWVMWKLHMFGCQD 173
           + +QIAKQVD+M+++   PC+EFD +GSV R +F G   SGYYDGRYW MWKL MFGC D
Sbjct: 83  TDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTD 142

Query: 174 AAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 299
           ++ VLREI EC  ++P  ++RVLGFD+K+QVQ+ GFLV +P+
Sbjct: 143 SSQVLREIQECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184