BP921490
Clone id YMU001_000150_E09
Library
Length 495
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CCTGAAGCATTATCAGTTCAGAACCAAATCCTTATTGCCTTGCTCCAACTCTTGTGGTAG
TTATCCTGGGGCATGTGATGATTTCTGCCTGGCTTTTGAATGATTTTCTAGAGTTCCCTC
ACCTTTCTCGTAGTCACTGGTATCGTCAGGCATTTGCAAGCGATGGAGTCGCTCTTGTAT
CATCATCAAACCAACAGCGTGATGAGCATCATAACACAAGGTTTCGATGATTTTGAACCC
TTGAGTTATGGATTGATCAAATGCCAAAAGGGCACACATTTGGATAGCCATAAGGTAATT
CACAATTAGATACCTTCACCACGACGAGATGATCTCAGAGCATCTGTACTATCAATGGCC
CCTCTCAAGATGGGCAAAGACTCATCCAATAAATGATCAGTTCCCAAGGTCATCACACCC
ATGCTCTGCCTTTTCTTCTGGACCCCTTTTCCAACAGCATCATCCAAGATAGTACAATGT
GGCCCCAAATTCCTC
■■Homology search results ■■ -
sp_hit_id Q9TXQ1
Definition sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans
Align length 65
Score (bit) 32.0
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921490|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_E09.
(495 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenor... 32 1.6
sp|Q0IHV1|INF2_XENTR Inverted formin-2 OS=Xenopus tropicalis GN=... 32 2.1
sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 OS=Ictalurus punc... 30 4.6
sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio GN... 30 4.6
sp|O15197|EPHB6_HUMAN Ephrin type-B receptor 6 OS=Homo sapiens G... 30 4.6
sp|P0C0K7|EPHB6_RAT Ephrin type-B receptor 6 OS=Rattus norvegicu... 30 6.0
sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsi... 30 6.1

>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5
OS=Caenorhabditis elegans GN=pme-5 PE=2 SV=1
Length = 2276

Score = 32.0 bits (71), Expect = 1.6
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +3

Query: 12 ISSEPNPYCLAPTLVVVILGHVMISAWLLNDFLEFPHLSRSHWYRQAFASDGVALVSSSN 191
I SEPN + L P V + GH I WL LE PH +++ A ++G L+S+
Sbjct: 591 ILSEPNDWQLYPLSVAYLKGHYGIVTWL----LEGPHKDKAN--INAKDNNGATLLSNLL 644

Query: 192 QQRDE 206
DE
Sbjct: 645 SYADE 649


>sp|Q0IHV1|INF2_XENTR Inverted formin-2 OS=Xenopus tropicalis GN=inf2
PE=2 SV=1
Length = 1380

Score = 31.6 bits (70), Expect = 2.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = -1

Query: 273 ALLAFDQSITQGFKIIETLC----YDAHHAVGLMMIQERLHRLQMPDDTSDYEKGEGTLE 106
AL D ++T+G ++ E C Y H +G + H + + D +K +
Sbjct: 1291 ALQTRDTTVTEGSQVEEDKCNDEGYPEHKTMGEHPLNSSSHSTTLQQSSEDGQKVKRGSS 1350

Query: 105 NHSKARQKSSH 73
H K R+ S H
Sbjct: 1351 KHKKKRRSSKH 1361


>sp|Q90YV5|RL13_ICTPU 60S ribosomal protein L13 OS=Ictalurus
punctatus GN=rpl13 PE=2 SV=3
Length = 211

Score = 30.4 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2

Query: 92 PGRNHHMPQDNYHKSWSKAIRIWF 21
P RN + ++HK W K +R WF
Sbjct: 3 PSRNGMILNPHFHKDWQKRVRTWF 26


>sp|Q90Z10|RL13_DANRE 60S ribosomal protein L13 OS=Danio rerio
GN=rpl13 PE=2 SV=3
Length = 211

Score = 30.4 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2

Query: 92 PGRNHHMPQDNYHKSWSKAIRIWF 21
P RN + ++HK W K +R WF
Sbjct: 3 PSRNGMILNPHFHKDWQKRVRTWF 26


>sp|O15197|EPHB6_HUMAN Ephrin type-B receptor 6 OS=Homo sapiens
GN=EPHB6 PE=1 SV=2
Length = 1021

Score = 30.4 bits (67), Expect = 4.6
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2

Query: 299 FTIRYLHHDEMISEHLYYQWPLSRWAKTHPI--NDQFPRSSHPCSAFSS 439
FT+ Y +E S W L RW K I ++ FP SS S+ SS
Sbjct: 128 FTLYYRQAEEPDSPDSVSSWHLKRWTKVDTIAADESFPSSSSSSSSSSS 176


>sp|P0C0K7|EPHB6_RAT Ephrin type-B receptor 6 OS=Rattus norvegicus
GN=Ephb6 PE=2 SV=1
Length = 1013

Score = 30.0 bits (66), Expect = 6.0
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2

Query: 299 FTIRYLHHDEMISEHLYYQWPLSRWAKTHPI--NDQFPRSSHPCSAFSSGP 445
FT+ Y DE S W L RW K I ++ FP SS S+++ GP
Sbjct: 128 FTLYYRQADEPDSPDSISAWHLKRWTKVDTIAADESFPASS-SSSSWAVGP 177


>sp|O65649|FPP5_ARATH Filament-like plant protein 5 OS=Arabidopsis
thaliana GN=FPP5 PE=2 SV=2
Length = 996

Score = 30.0 bits (66), Expect = 6.1
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1

Query: 181 HHQTNSVMSIITQGFDDFEPLSYGLIKCQKGTHLDSHKV 297
HH SV S+ GFD+ S +C T LDSHKV
Sbjct: 432 HHYPPSVTSVSEDGFDEEGSSS----ECGPATSLDSHKV 466


tr_hit_id B0XHZ0
Definition tr|B0XHZ0|B0XHZ0_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length 83
Score (bit) 36.2
E-value 0.86
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921490|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_E09.
(495 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0XHZ0|B0XHZ0_CULQU Putative uncharacterized protein OS=Culex... 36 0.86
tr|B0Z9L7|B0Z9L7_9BILA 60S ribosomal protein L13 OS=Lineus virid... 34 3.3
tr|Q3A8Q8|Q3A8Q8_CARHZ Putative adenylylsulfate reductase, alpha... 34 4.3
tr|B4LI26|B4LI26_DROVI GJ12786 OS=Drosophila virilis GN=GJ12786 ... 33 5.6
tr|B2YHY9|B2YHY9_9BILA Putative 60S ribosomal protein RPL13 (Fra... 33 7.3
tr|A6GDM3|A6GDM3_9DELT Metalloendopeptidase, putative, glycoprot... 33 9.5

>tr|B0XHZ0|B0XHZ0_CULQU Putative uncharacterized protein OS=Culex
quinquefasciatus GN=CpipJ_CPIJ018914 PE=4 SV=1
Length = 516

Score = 36.2 bits (82), Expect = 0.86
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = -2

Query: 452 GKGVQKKRQSMGVMTLGTDHLLDESLPILRGAIDSTDALRSSRRGEGI*L*ITLWLSKCV 273
GK +R++ V TL T + +L I+ GA RGEG+ LW ++
Sbjct: 431 GKSGNHRRRTSTVRTLATLAYITFNLLIMIGAEFGPTG---GGRGEGL-----LWRAEYP 482

Query: 272 PFWHLINP*LKGSKSSKPCVMML 204
PFWHL + + + S PC ++L
Sbjct: 483 PFWHLFSTMMARACPSMPCDVLL 505


>tr|B0Z9L7|B0Z9L7_9BILA 60S ribosomal protein L13 OS=Lineus
viridis PE=2 SV=1
Length = 207

Score = 34.3 bits (77), Expect = 3.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2

Query: 92 PGRNHHMPQDNYHKSWSKAIRIWF 21
P RN+ +P ++HK W K +R WF
Sbjct: 3 PKRNNMVPNGHFHKEWQKYVRTWF 26


>tr|Q3A8Q8|Q3A8Q8_CARHZ Putative adenylylsulfate reductase, alpha
subunit OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=CHY_2691 PE=4 SV=1
Length = 532

Score = 33.9 bits (76), Expect = 4.3
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2

Query: 2 LKHYQFRTKSLLPCSNSCGSYPG-ACDDFCL 91
+KH FRT+S LPC G YPG A +D+ L
Sbjct: 476 IKHMAFRTESRLPCYQERGDYPGKAPEDYLL 506


>tr|B4LI26|B4LI26_DROVI GJ12786 OS=Drosophila virilis GN=GJ12786
PE=4 SV=1
Length = 1201

Score = 33.5 bits (75), Expect = 5.6
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +2

Query: 305 IRYLHHDEMISEH--LYYQWPLSRWAKTHPINDQFPRSSHP---CSAFSSGPLFQQHHPR 469
+++ HHDE +EH +++ S H N +P +SH S F S + QHH R
Sbjct: 777 VQHYHHDEHHTEHHAVHHAELHSEAPFDHSFNSIYPETSHSDFGSSGFGSYGDYSQHHER 836

Query: 470 *YNVA 484
NV+
Sbjct: 837 SVNVS 841


>tr|B2YHY9|B2YHY9_9BILA Putative 60S ribosomal protein RPL13
(Fragment) OS=Novocrania anomala PE=2 SV=1
Length = 134

Score = 33.1 bits (74), Expect = 7.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2

Query: 92 PGRNHHMPQDNYHKSWSKAIRIWF 21
P RN+ +P ++HK W + +R WF
Sbjct: 3 PKRNNMVPNGHFHKDWQRYVRTWF 26


>tr|A6GDM3|A6GDM3_9DELT Metalloendopeptidase, putative,
glycoprotease family protein OS=Plesiocystis pacifica
SIR-1 GN=PPSIR1_32814 PE=4 SV=1
Length = 366

Score = 32.7 bits (73), Expect = 9.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -2

Query: 476 CTILDDAVGKGVQKKRQSMGVMT-LGTDHLLDESLPILRGAIDSTDALRSSRRGEGI 309
CT+L V V+ + GV+ L + H LD P+LRGA++ LR GE +
Sbjct: 28 CTVLSSVVASQVEVHARFGGVVPELASRHHLDALAPVLRGAVEQA-GLRFDELGESL 83