BP921493 |
Clone id |
YMU001_000150_F01 |
Library |
YMU01 |
Length |
334 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000150_F01. |
Accession |
BP921493 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL501Contig1 |
Sequence |
ACACTCCATTGCCCCCCTCACGCCATCCTAGGTGTGCCTTTTGATATCTCCTTAGGTGTG CAAAAGCTCACAGCCCTCATTCAAGAAATAGATTTCTCTGTCGTAGATTCGACTGGTTTC ATTTTATCTGGAGCACATAGTGATAGCATACATATTCTTCCTTACGCCAAGAATGTCATC TCATGCAAGCTGGTTCCTATTGTTTCTGGCCCCCAACAACTCCCTCAATTTAACCTTATT GCCAAGCGTTATAATGCTGGCTTCCAGCAGTCACTTGCCTGCATACAAATCTTCGTCTTT CCATCATCAATGGCACAGACAAAACCCCTCAAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
B2RXC1 |
Definition |
sp|B2RXC1|CD041_MOUSE UPF0636 protein C4orf41 homolog OS=Mus musculus |
Align length |
65 |
Score (bit) |
44.3 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B032 |
Definition |
tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
100 |
Score (bit) |
111.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921493|Adiantum capillus-veneris mRNA, clone: YMU001_000150_F01. (334 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-23 tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein OJ1479_B... 102 7e-21 tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza... 102 7e-21 tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza... 102 7e-21 tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A1... 99 1e-19 tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g6595... 97 4e-19 tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimar... 64 4e-09 tr|B6PH91|B6PH91_BRAFL Putative uncharacterized protein OS=Branc... 51 3e-05 tr|Q54KR2|Q54KR2_DICDI DUF1683 family protein OS=Dictyostelium d... 50 7e-05 tr|Q013M6|Q013M6_OSTTA [S] KOG4386 Uncharacterized conserved pro... 47 5e-04 tr|Q6T3U9|Q6T3U9_CTEID Putative uncharacterized protein (Fragmen... 43 0.007 tr|Q5C3C8|Q5C3C8_SCHJA SJCHGC08892 protein (Fragment) OS=Schisto... 43 0.007 tr|B3DLV7|B3DLV7_XENTR LOC100170554 protein OS=Xenopus tropicali... 43 0.009 tr|B3KU05|B3KU05_HUMAN cDNA FLJ39026 fis, clone NT2RP7005675 OS=... 43 0.009 tr|Q4SVC2|Q4SVC2_TETNG Chromosome undetermined SCAF13766, whole ... 40 0.059 tr|Q4R661|Q4R661_MACFA Testis cDNA, clone: QtsA-19059, similar t... 40 0.059 tr|B3S6B6|B3S6B6_TRIAD Putative uncharacterized protein OS=Trich... 37 0.65
>tr|A5B032|A5B032_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007638 PE=4 SV=1 Length = 962
Score = 111 bits (277), Expect = 2e-23 Identities = 52/100 (52%), Positives = 72/100 (72%) Frame = +1
Query: 4 LHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVIS 183 L CPPHAILGVPF + +Q T L+QEI FS+ DS F+LSG+H+D+I ++P ++ +S Sbjct: 858 LECPPHAILGVPFTYIIKIQNQTHLLQEIKFSLGDSPSFVLSGSHNDTIFVIPKTEHSLS 917
Query: 184 CKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFP 303 LVP+ SG QQLP+ + + RY+AGFQ ++A IFVFP Sbjct: 918 YMLVPLASGSQQLPRVTVTSVRYSAGFQPTIAASTIFVFP 957
>tr|Q69VK3|Q69VK3_ORYSJ Putative uncharacterized protein OJ1479_B12.25-2 (Putative uncharacterized protein OJ1191_G08.1-2) OS=Oryza sativa subsp. japonica GN=OJ1479_B12.25-2 PE=4 SV=1 Length = 723
Score = 102 bits (255), Expect = 7e-21 Identities = 46/102 (45%), Positives = 70/102 (68%) Frame = +1
Query: 1 TLHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVI 180 T+ CPP+AILG+PF + + T+L+QEI +S+VDS F+ SGAH+ + ILP ++++ Sbjct: 604 TMECPPYAILGIPFTFHVKIYNSTSLLQEIKYSLVDSQNFVFSGAHNHAASILPKTEHIV 663
Query: 181 SCKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFPS 306 S KLVP+ SG QQLP+ + + RY+A S + +FV+PS Sbjct: 664 SHKLVPLGSGSQQLPRITITSVRYSAALTPSASAATVFVYPS 705
>tr|A3AAP1|A3AAP1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_007863 PE=4 SV=1 Length = 1177
Score = 102 bits (255), Expect = 7e-21 Identities = 46/102 (45%), Positives = 70/102 (68%) Frame = +1
Query: 1 TLHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVI 180 T+ CPP+AILG+PF + + T+L+QEI +S+VDS F+ SGAH+ + ILP ++++ Sbjct: 1058 TMECPPYAILGIPFTFHVKIYNSTSLLQEIKYSLVDSQNFVFSGAHNHAASILPKTEHIV 1117
Query: 181 SCKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFPS 306 S KLVP+ SG QQLP+ + + RY+A S + +FV+PS Sbjct: 1118 SHKLVPLGSGSQQLPRITITSVRYSAALTPSASAATVFVYPS 1159
>tr|A2X8W8|A2X8W8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08680 PE=4 SV=1 Length = 1177
Score = 102 bits (255), Expect = 7e-21 Identities = 46/102 (45%), Positives = 70/102 (68%) Frame = +1
Query: 1 TLHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVI 180 T+ CPP+AILG+PF + + T+L+QEI +S+VDS F+ SGAH+ + ILP ++++ Sbjct: 1058 TMECPPYAILGIPFTFHVKIYNSTSLLQEIKYSLVDSQNFVFSGAHNHAASILPKTEHIV 1117
Query: 181 SCKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFPS 306 S KLVP+ SG QQLP+ + + RY+A S + +FV+PS Sbjct: 1118 SHKLVPLGSGSQQLPRITITSVRYSAALTPSASAATVFVYPS 1159
>tr|Q9FKY7|Q9FKY7_ARATH Genomic DNA, chromosome 5, TAC clone:K2A18 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1194
Score = 98.6 bits (244), Expect = 1e-19 Identities = 47/110 (42%), Positives = 71/110 (64%) Frame = +1
Query: 1 TLHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVI 180 +L PP+AILG PF ++ + T L+QE F + D+ F+LSG+HS+++ +LP +++V+ Sbjct: 1081 SLDSPPYAILGEPFTYAVRICNQTQLLQEAKFGLADAQSFVLSGSHSNTVSVLPKSEHVL 1140
Query: 181 SCKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFPSSMAQTKPL 330 S KLVP+ G QQLP+ L + RY A FQ S +FVFPS+ K + Sbjct: 1141 SYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVASSVFVFPSAPQAEKAI 1190
>tr|Q8L614|Q8L614_ARATH Putative uncharacterized protein At5g65950 OS=Arabidopsis thaliana GN=At5g65950 PE=2 SV=1 Length = 865
Score = 97.1 bits (240), Expect = 4e-19 Identities = 46/110 (41%), Positives = 70/110 (63%) Frame = +1
Query: 1 TLHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVI 180 +L PP+ ILG PF ++ + T L+QE F + D+ F+LSG+HS+++ +LP +++V+ Sbjct: 752 SLDSPPYVILGEPFTYAVRICNQTQLLQEAKFGLADAQSFVLSGSHSNTVSVLPKSEHVL 811
Query: 181 SCKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFPSSMAQTKPL 330 S KLVP+ G QQLP+ L + RY A FQ S +FVFPS+ K + Sbjct: 812 SYKLVPLTCGEQQLPKITLTSARYAAEFQPSAVASSVFVFPSAPQAEKAI 861
>tr|A4S1A2|A4S1A2_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_87978 PE=4 SV=1 Length = 1092
Score = 63.9 bits (154), Expect = 4e-09 Identities = 34/100 (34%), Positives = 53/100 (53%) Frame = +1
Query: 4 LHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVIS 183 L CPP +G PF + V T +I SV DSTGF+ +G ++++ P + Sbjct: 991 LRCPPKLFVGDPFTYEVRVSNATTANYDIKISVTDSTGFVFAGIKRGTMYVPPLSTASFY 1050
Query: 184 CKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACIQIFVFP 303 LVPIV+G LP+ +L A+R++A F + ++ V P Sbjct: 1051 FLLVPIVTGSAILPELSLGAERFSATFVPPIESRRVIVRP 1090
>tr|B6PH91|B6PH91_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_106924 PE=4 SV=1 Length = 1136
Score = 50.8 bits (120), Expect = 3e-05 Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%) Frame = +1
Query: 4 LHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVIS 183 + P H + P I+ + T+ +QE++ + S F+ SG +LPY K+V++ Sbjct: 1021 MELPAHGRVREPLGITYTLHNRTSTVQEMEVMMEPSEAFMFSGHKQVHFRLLPYGKHVLT 1080
Query: 184 CKLVPIVSGPQQLPQFNLIAKRYNAGFQQSLACI---QIFVFPS 306 L P++SG LP+ ++ RY Q ++ + +F+ P+ Sbjct: 1081 YNLYPLLSGHMVLPRLHVNMLRYPGTTDQIISKMMPTHVFIMPT 1124
>tr|Q54KR2|Q54KR2_DICDI DUF1683 family protein OS=Dictyostelium discoideum GN=DDB_0187312 PE=4 SV=1 Length = 1524
Score = 49.7 bits (117), Expect = 7e-05 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Frame = +1
Query: 4 LHCPPHAILGVPFDISLGVQKLTALIQEIDFSVVDSTG-------FILSGAHSDSIHILP 162 +H P I+G P S+ ++ T +QE D V++ F SG + I P Sbjct: 1411 VHVPSFGIVGQPLTQSIIIKNNTNFLQEFDLQVINPPSYGNSDIPFFFSGDKQSTFSIHP 1470
Query: 163 YAKNVISCKLVPIVSGPQQLPQFNLIAKRYN 255 + + I L+P+V+G LP F +I+KR+N Sbjct: 1471 DSTHEIKHILLPLVAGKLNLPHFKIISKRFN 1501
>tr|Q013M6|Q013M6_OSTTA [S] KOG4386 Uncharacterized conserved protein OS=Ostreococcus tauri GN=Ot08g01640 PE=4 SV=1 Length = 1475
Score = 47.0 bits (110), Expect = 5e-04 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +1
Query: 49 SLGVQKLTALIQEIDFSVVDSTGFILSGAHSDSIHILPYAKNVISCKLVPIVSGPQQLPQ 228 S+ V T L +I +V DS GF+ SG ++++ P + + LVP+ +G LP+ Sbjct: 981 SIRVTNTTTLNHDIKIAVTDSAGFVFSGYRRTTMYVPPLSNASLYLLLVPVSTGEMMLPE 1040
Query: 229 FNLIAKRYNAGF 264 L A+R +A F Sbjct: 1041 LALSAERLSAKF 1052
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