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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP921495
Clone id YMU001_000150_F03
Library
Length 440
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATGTGAGCATCATCAGCATTATTTTATGACGAAATAATACCCAAGCTGTCTTTCTATGTG
TAAGCCAAACCAAACCTATCGGGGCTATTTTGTCAAAGTTTTTTAAACAACCCAATTGTA
AATTTCCATCCTGTGGCTCATCTGCTTCAAAGTTACAGAATTAATAGAAAAAATTATGTA
CGCTTGCAGGAGAATGATGAATGAAATTTACGCTTGCAGAAGAATAAATATCAGCATTCT
CCTGCCTTGAGTTTCCTTCTCTCAACTCACTTGCGAGTTTTCATCTCCATTTTCCCCCAG
ATTCAGTTCTTTCATTTGCTGGTCCACACTCACAAAACCCGTCTCGGCAACAAACCAGCT
TAGCAAAGCAAATAGTGTCCCCGCGAGACCAATCAAAAGAACAACATGTGTGAGAAGTAC
AAAACTGGTTGATCCCATCG
■■Homology search results ■■ -
sp_hit_id Q92152
Definition sp|Q92152|PA23_TRIOK Phospholipase A2 homolog PLA2-03 OS=Trimeresurus okinavensis
Align length 55
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921495|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_F03.
         (440 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q92152|PA23_TRIOK Phospholipase A2 homolog PLA2-03 OS=Trimere...    31   2.6  
sp|Q9Z7F1|Y755_CHLPN UPF0242 protein CPn_0755/CP_1117/CPj0755/Cp...    29   7.5  
sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protei...    29   7.5  
sp|P23785|GRN_RAT Granulins OS=Rattus norvegicus GN=Grn PE=1 SV=3      29   7.5  

>sp|Q92152|PA23_TRIOK Phospholipase A2 homolog PLA2-03
           OS=Trimeresurus okinavensis PE=2 SV=1
          Length = 137

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
 Frame = -2

Query: 439 DGINQFCTSHTCC--------------SFDWSRGDTICFAKLVCCRDGFCECGPA 317
           D  ++ C+ H CC              S+ W  GD +C     C ++  CEC  A
Sbjct: 54  DATDRCCSVHKCCYKKLTDCDPKTDRYSYSWENGDIVCGGDDPCTKE-VCECDKA 107


>sp|Q9Z7F1|Y755_CHLPN UPF0242 protein
           CPn_0755/CP_1117/CPj0755/CpB0783 OS=Chlamydia pneumoniae
           GN=CPn_0755 PE=3 SV=1
          Length = 401

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -2

Query: 322 PANERTESGGKWR*KLASELREGNSRQENADIYSSASVNFIHHSPASVHNF 170
           P+ E     G    +L+SEL++   + EN +  SS + +   H+  SVHN+
Sbjct: 232 PSQESNAVTGNISLQLSSELKKIAFKAENIEAASSLTASRYLHTDTSVHNY 282


>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic OS=Arabidopsis thaliana
           GN=MEE40 PE=2 SV=1
          Length = 754

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
 Frame = +3

Query: 240 SCLEF-PSLNSLA------SFHLHF-PPDSVLSFAGPHSQNPSRQQTSLAKQIVSPRDQS 395
           SCL+F P   S A      SF L+  PP S +SFA PHS   S     L   + S  D S
Sbjct: 5   SCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDS 64


>sp|P23785|GRN_RAT Granulins OS=Rattus norvegicus GN=Grn PE=1 SV=3
          Length = 588

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 436 GINQFCTSHTCCSFDWSRGDTIC-FAKLVCCRDG 338
           G   FC  +  C  D   G   C + K VCCRDG
Sbjct: 517 GAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDG 550
tr_hit_id Q9FZ98
Definition tr|Q9FZ98|Q9FZ98_ARATH F3H9.10 protein (Putative uncharacterized protein At1g28250) (Putative uncharacterized protein) (Putative uncharacterized protein At1g28250/F3H9_23) OS=Arabidopsis thaliana
Align length 44
Score (bit) 53.5
E-value 5.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP921495|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_F03.
         (440 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FZ98|Q9FZ98_ARATH F3H9.10 protein (Putative uncharacterized...    54   5e-06
tr|Q6YSW1|Q6YSW1_ORYSJ Putative uncharacterized protein B1032F05...    50   4e-05
tr|A3AD42|A3AD42_ORYSJ Putative uncharacterized protein OS=Oryza...    50   4e-05
tr|A2YKF3|A2YKF3_ORYSI Putative uncharacterized protein OS=Oryza...    50   4e-05
tr|B6U618|B6U618_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|A9TUH4|A9TUH4_PHYPA Predicted protein OS=Physcomitrella paten...    49   1e-04
tr|A5URJ6|A5URJ6_ROSS1 Putative uncharacterized protein OS=Rosei...    35   1.9  
tr|Q6P8A4|Q6P8A4_XENTR RGM domain family, member B OS=Xenopus tr...    34   3.2  
tr|A5TSU9|A5TSU9_FUSNP Possible TPS family two-partner secretion...    33   5.4  

>tr|Q9FZ98|Q9FZ98_ARATH F3H9.10 protein (Putative uncharacterized
           protein At1g28250) (Putative uncharacterized protein)
           (Putative uncharacterized protein At1g28250/F3H9_23)
           OS=Arabidopsis thaliana GN=At1g28250/F3H9_23 PE=2 SV=1
          Length = 102

 Score = 53.5 bits (127), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -3

Query: 420 VLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNLGEN 289
           +LL HV  LI +A TLF LL+WF+A+TG V V+ QM+ELNL  N
Sbjct: 55  MLLVHVGFLIVIASTLFILLNWFLAQTGLVQVETQMQELNLLPN 98


>tr|Q6YSW1|Q6YSW1_ORYSJ Putative uncharacterized protein B1032F05.18
           OS=Oryza sativa subsp. japonica GN=B1032F05.18 PE=4 SV=1
          Length = 109

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = -3

Query: 432 STSFVLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNL 298
           S+ F+++ HV+LL+ +   LF LL+ F+AETG V V+QQMKE+ +
Sbjct: 53  SSDFMIIAHVLLLVTIGTVLFVLLNRFLAETGLVPVEQQMKEMGI 97


>tr|A3AD42|A3AD42_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008714 PE=4 SV=1
          Length = 84

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = -3

Query: 432 STSFVLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNL 298
           S+ F+++ HV+LL+ +   LF LL+ F+AETG V V+QQMKE+ +
Sbjct: 28  SSDFMIIAHVLLLVTIGTVLFVLLNRFLAETGLVPVEQQMKEMGI 72


>tr|A2YKF3|A2YKF3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25700 PE=4 SV=1
          Length = 109

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = -3

Query: 432 STSFVLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNL 298
           S+ F+++ HV+LL+ +   LF LL+ F+AETG V V+QQMKE+ +
Sbjct: 53  SSDFMIIAHVLLLVTIGTVLFVLLNRFLAETGLVPVEQQMKEMGI 97


>tr|B6U618|B6U618_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 109

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 22/45 (48%), Positives = 33/45 (73%)
 Frame = -3

Query: 432 STSFVLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNL 298
           S +FV++ HV+LL+ +   LF LL+ F+AE G V V+QQMKE+ +
Sbjct: 53  SKNFVIVAHVLLLVTIGTVLFVLLNRFLAEVGLVPVEQQMKEMGI 97


>tr|A9TUH4|A9TUH4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172029 PE=4 SV=1
          Length = 306

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 24/47 (51%), Positives = 34/47 (72%)
 Frame = -3

Query: 429 TSFVLLTHVVLLIGLAGTLFALLSWFVAETGFVSVDQQMKELNLGEN 289
           + F  L HV +LI +A TLF LL+WF++E G V V++QM ELNL ++
Sbjct: 250 SGFGPLLHVFVLILVAITLFLLLNWFISEIGIVPVEEQMAELNLTDS 296


>tr|A5URJ6|A5URJ6_ROSS1 Putative uncharacterized protein
           OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_0835 PE=4
           SV=1
          Length = 297

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 421 CTSHTCCSFDWSRGDTICFAKLVCCRDGFCECG 323
           C   TC    W + +  CFA   CC  G CECG
Sbjct: 263 CECGTCSDSTWVQNEC-CFASECCCNMGICECG 294


>tr|Q6P8A4|Q6P8A4_XENTR RGM domain family, member B OS=Xenopus
           tropicalis GN=rgmb PE=2 SV=1
          Length = 430

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 23/100 (23%), Positives = 38/100 (38%)
 Frame = -2

Query: 322 PANERTESGGKWR*KLASELREGNSRQENADIYSSASVNFIHHSPASVHNFFY*FCNFEA 143
           P +ER + GG  R  +        S  + A +Y+  S N   H    V + ++  C F+ 
Sbjct: 312 PTSERIDEGGHLRLPVTVSSTHDGSTVQTASLYTLESANEKCHEKIQVKHIYFHSCVFDL 371

Query: 142 DEPQDGNLQLGCLKNFDKIAPIGLVWLTHRKTAWVLFRHK 23
               D N        ++ +       L  RK  W +F +K
Sbjct: 372 LTTGDANFTAAAFSAWEDVET-----LHPRKERWQIFPNK 406


>tr|A5TSU9|A5TSU9_FUSNP Possible TPS family two-partner secretion
            family protein TpsA OS=Fusobacterium nucleatum subsp.
            polymorphum ATCC 10953 GN=tpsA2 PE=4 SV=1
          Length = 2751

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +1

Query: 103  LNNPIVNFHPVAHLLQSYRINRKNYVRLQENDE*NLRLQKNKYQHSPALSFLLSTHL 273
            +N  +V  +P  ++     I+ K Y+ L +ND+   R+ KN   + P  S+L+ T++
Sbjct: 1296 INVGVVTLNP-KNISPKKEIDTKEYINLPKNDKGLFRINKNNIGNKPGFSYLVETNI 1351