BP921500
Clone id YMU001_000150_F09
Library
Length 254
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAAAGTGGCCAGACGATTGAAGCCATAAGTTGGGCCTTTAAGAGCGTTCTGTCCATATTC
TAAGCACCTTTGAGGGAGTCATAAACATCTGAGAGGCACCGGGATACTTTATGGGTACAT
GCAATTGTGTAGCATGTATTAGAGTCACTGAACCAACAGAAAGCAAATGGTTGGGGCAGG
AATTACTGGAAATTTGGCCTGGCTTGTGGCATTTGAATAGATACAAGAAAATCATAGTCT
CCTTCCGTGCATTG
■■Homology search results ■■ -
sp_hit_id O34767
Definition sp|O34767|OXDD_BACSU Oxalate decarboxylase oxdD OS=Bacillus subtilis
Align length 61
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921500|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_F09.
(254 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O34767|OXDD_BACSU Oxalate decarboxylase oxdD OS=Bacillus subt... 29 6.3

>sp|O34767|OXDD_BACSU Oxalate decarboxylase oxdD OS=Bacillus
subtilis GN=oxdD PE=1 SV=1
Length = 392

Score = 29.3 bits (64), Expect = 6.3
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Frame = -2

Query: 253 NARKETMIFLYLFKCHKPGQISSNS----CPNHL----LSVGSVTLIHATQLHVP-IKYP 101
N ET+ FL +FK ++ +S N P L L+ GSV L + VP +KYP
Sbjct: 331 NTGTETLWFLEMFKSNRYADVSLNQWMALTPKELVQSNLNAGSVMLDSLRKKKVPVVKYP 390

Query: 100 G 98
G
Sbjct: 391 G 391


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921500|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_F09.
(254 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******