BP921506
Clone id YMU001_000150_G04
Library
Length 508
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGAACAGAAAAACTACAGGTTCCATTTGATCAGGATAGAACACACATTCGCAGCACCACA
TGCTGGGAAAGCCCTTGGTGGAGTATTCCTTACAAGGGTTCATCCAAATACGTAAACAAA
TAAGAGAAAATTGGTGCATTTTTGCACCACAATCAAGCCATTGTTCCACTGTCAGGCATT
CACACTCTGTTTAAGGGCATGTAACTTCTATAAGCCCTTTTAAAAAACAGCACATTTTGT
ACAGCTCTTACAAGACCAATGTACAGCCTTGGGTTTGAGTAACCTTACAAGAACCTTCTT
TACCCTTTAAAAAATATAGGCATCACACCTCAACCTTTGAAACTGCCTTGCAAACAGAAG
AGCTAGCAACGGCCCCCACATTGGAGATCAGATTCTTTTATCGAATGCGAGAGAGCATTC
TCTCCATCAAGGGCTAATTGGGAATGTAGCTAAATAACAGAATTGTGGGATACGTGAGTG
ATGCTAGTAACTATAAAATGATACCTGA
■■Homology search results ■■ -
sp_hit_id Q3E7D1
Definition sp|Q3E7D1|FB131_ARATH F-box protein At2g40925 OS=Arabidopsis thaliana
Align length 33
Score (bit) 26.2
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921506|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_G04.
(508 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3E7D1|FB131_ARATH F-box protein At2g40925 OS=Arabidopsis tha... 26 1.0
sp|A6L1Z3|META_BACV8 Homoserine O-succinyltransferase OS=Bactero... 32 2.3
sp|P07772|BEND_ACIAD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxyl... 30 8.6

>sp|Q3E7D1|FB131_ARATH F-box protein At2g40925 OS=Arabidopsis
thaliana GN=At2g40925 PE=2 SV=1
Length = 403

Score = 26.2 bits (56), Expect(2) = 1.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2

Query: 219 KGL*KLHALKQSVNA*QWNNGLIVVQKCTNFLL 121
+GL +L LK + +W+N ++V+Q C L+
Sbjct: 297 EGLVELWVLKDAAGKKKWSNMILVLQPCQRHLV 329



Score = 25.4 bits (54), Expect(2) = 1.0
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -1

Query: 133 QFSLICLRIWMNPCKEYSTKGFPSMWC-CECVF---YPDQMEPVVFL 5
QF ++C + N ++ G P +W EC F + D+ E ++L
Sbjct: 355 QFYILCYDVQNNDLRKVEITGVPRLWLHKECNFDLKFMDESESFIYL 401


>sp|A6L1Z3|META_BACV8 Homoserine O-succinyltransferase
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=metA PE=3 SV=1
Length = 305

Score = 31.6 bits (70), Expect = 2.3
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1

Query: 7 EKLQVPFDQDRTHIRSTT--CWESPWWSIPYKGSSKYVNK*EKIGAFLHH 150
+++ FD RTH+ ST CW + + G KY K + G F HH
Sbjct: 122 DEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPLKQKMFGIFRHH 171


>sp|P07772|BEND_ACIAD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate
dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=benD
PE=3 SV=2
Length = 261

Score = 29.6 bits (65), Expect = 8.6
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 9/32 (28%)
Frame = -1

Query: 109 IWMNPCKEYSTKG---------FPSMWCCECV 41
IWM P +E+S + FP++WCC V
Sbjct: 97 IWMKPFQEFSEEEIIQEVHRSLFPALWCCRAV 128


tr_hit_id A7RIY7
Definition tr|A7RIY7|A7RIY7_NEMVE Predicted protein OS=Nematostella vectensis
Align length 52
Score (bit) 33.5
E-value 6.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921506|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_G04.
(508 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7RIY7|A7RIY7_NEMVE Predicted protein OS=Nematostella vectens... 33 6.1

>tr|A7RIY7|A7RIY7_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g238642 PE=4 SV=1
Length = 294

Score = 33.5 bits (75), Expect = 6.1
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1

Query: 34 DRTHIRSTTCW----ESPWWSIPYKGSSKYVNK*EKIGAFLHHNQAIVPLSG 177
D THI S CW +SPW ++ Y + +V K AF H +Q I P G
Sbjct: 124 DLTHIFSIACWYKVTDSPWVAVSYPDKTFFVRKGT---AFPHGSQQIRPRPG 172