BP921508
Clone id YMU001_000150_G06
Library
Length 509
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000150_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTACGTGAAATGAATTGCTCTATGTTTTCAAACGAGGACACCCTCAAATACATCC
AGCCGTCCATCTATACAACATACACGGTGCAGCTGACTCCGAGAGAATGAAGCACTGTCA
AAATCTACAAAACATCTTCATGATCTTCTGAAAAAGCGATTGTTGCTTCAACGCAGACGC
ATAACAGCAACATTTATATACTGTGTGATCTTAAGATTAAGAATGTGGAGTATCACCACT
GAAATACTTTTTCCACGGTAGCTAGCTGGTGAAAGGCGCTGCCTCTGGCTTTGTGTGCGC
TTGTATACAATGGTGTGTGCACACAAAAAAAGATTATTCATTAACCACCTTCGGCTTCAT
CAGAACTTCATCCTTCGGCAAATGAATCAATGACAGCAAAACCACTGAAGCATTGCTCAA
ACAAAGATGATCGATTTGTGTGCAAGACTCCCACCCACACCTTCAAGCACGTAGATCATC
ATCTGACTCCGACTCAGATGAAGAGAAGC
■■Homology search results ■■ -
sp_hit_id Q10668
Definition sp|Q10668|SWI2_SCHPO Mating-type switching protein swi2 OS=Schizosaccharomyces pombe
Align length 52
Score (bit) 30.8
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921508|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_G06.
(509 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q10668|SWI2_SCHPO Mating-type switching protein swi2 OS=Schiz... 31 3.9

>sp|Q10668|SWI2_SCHPO Mating-type switching protein swi2
OS=Schizosaccharomyces pombe GN=swi2 PE=1 SV=1
Length = 722

Score = 30.8 bits (68), Expect = 3.9
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3

Query: 306 YNGVCTQKKIIH*P-PSASSELHPSANESMTAKPLKHCSNKDDRFVCKTPTH 458
Y+ VC +I+ PS S +HP N+ + +P K+ + R P H
Sbjct: 518 YSNVCLSTSLINRSLPSLKSTMHPGVNKDLITRPFKNVNKMSVRKALIKPFH 569


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921508|Adiantum capillus-veneris mRNA, clone:
YMU001_000150_G06.
(509 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******