BP921509 [AcEST]

BP921509
Clone id	YMU001_000150_G07
Library	YMU01
Length	592
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000150_G07.
Accession	BP921509
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	CACGAGAACAGAAGTATCATATATATTCAATTCAAAAATGCGGGCTTCCATCTAGAGGAA GCAATGGTTGCACTAAAAACTAGATAGGGAGGGATAACAAGAGGCTAGAATTGGAGAATC CATTAAGGCAAGTGCAAAACTGGGGGTAGCAAAGACCGCGAGATGTTGTCAAGGGAGGAT GATATTTATGAGGTGGGGCTTTGGATGCAACTGCAAGGAACAATTATGGAGAGCTTATAA TAATGTCGCATTCCAGAGCCTTGGCGGGAGGGCAAATGTGCTCTGCAAAATGTGGCCGGA GAGGGACGTTAACTATATTGTCGGTTAGCGCTGTTACGGGTTATGGTCTCAATGGGGCAG CTGCCAATATTCATGTGTAGCACAGGCTGCTGACCTCCACTGCATAAAATGGCTCCAAAA ATTTCAAGGATAGGGTTAGGCTCCGCTAAACCTAGTTAGCCGATCACCTGCTACAACTCT TCTCCCCTGAAGCACGGACTCGAAGCGAGCTTTAGATGGGCTCCAGCAGGAGCCGAAGCT TGAGCTACAGAAGAGTAGAGCGCTAAGCAGGCAGCCGGGGCCAGATCCGGGG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921509\|Adiantum capillus-veneris mRNA, clone: YMU001_000150_G07. (592 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B5KM05
Definition	tr\|B5KM05\|B5KM05_9FLAV Polyprotein (Fragment) OS=Barkedji virus
Align length	49
Score (bit)	33.5
E-value	9.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP921509\|Adiantum capillus-veneris mRNA, clone: YMU001_000150_G07. (592 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B5KM05\|B5KM05_9FLAV Polyprotein (Fragment) OS=Barkedji virus ... 33 9.4 >tr\|B5KM05\|B5KM05_9FLAV Polyprotein (Fragment) OS=Barkedji virus PE=4 SV=1 Length = 3418 Score = 33.5 bits (75), Expect = 9.4 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +2 Query: 236 YNNVAFQSLGGRANVLCKM---WPERDVNYIVG*RCYGLWS---QWGSC 364 YNNV+ S+G A++L M WP ++ +V G WS QW C Sbjct: 2322 YNNVSIASMGQHASILFTMSNGWPALEMTAVVPMVLMGAWSHVDQWAMC 2370