BP921515 |
Clone id |
YMU001_000150_H04 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000150_H04. |
Accession |
BP921515 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3363Contig1 |
Sequence |
GTACTCGAGCTGTCCCCCAAGTGAATCCAAGTATATCGGCATTGTCAATATGAACAAGAG GAAATGGATTTGCAAGCCAGAGTGTACCTACGTCTGTCAACCATATATTGTAACCAGAGT GCGTAATCATTGTTACTGCTTGAATAACAGTGAGAGCTCTTTCAATGTACACGATCTTAT CTTTGAGAGTTGGGTGTTTGAGAGTTCGGCGAATTTCTTTCTCAAGCAATTCGGGAGCAA GATGCATAACTGCATGGCCTTGGCGTAAAAGAGATTTTTCAAGCTCACGATCTTGAATGA GAATCACGAAGTTTCTGATGCTCAACTTGCTAAATTGGCAAAGCCAATTTCTTATGACTT CTCCACGAAAGCCCACTGCATCGACAAGAATAACTGTGCCGTTTTCTTCAAATGACGGTA CAATTGTTTTCACACCCTGAGCATTCTCTATAAGCCTACCCTGTTTGACCTCGTGGAAAC AAAAATCATACCTCTTCAATTGGTCCAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8NCL4 |
Definition |
sp|Q8NCL4|GALT6_HUMAN Polypeptide N-acetylgalactosaminyltransferase 6 OS=Homo sapiens |
Align length |
70 |
Score (bit) |
30.8 |
E-value |
3.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FMN8 |
Definition |
tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 (At5g12260/MXC9_22) OS=Arabidopsis thaliana |
Align length |
136 |
Score (bit) |
80.1 |
E-value |
6.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP921515|Adiantum capillus-veneris mRNA, clone: YMU001_000150_H04. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 ... 80 6e-14 tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genom... 78 3e-13 tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago... 70 8e-11 tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza... 67 4e-10 tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative unchara... 67 5e-10 tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment) OS=Physcomit... 65 2e-09 tr|A7QXY4|A7QXY4_VITVI Chromosome undetermined scaffold_235, who... 48 3e-04 tr|Q9S7C7|Q9S7C7_ARATH Putative uncharacterized protein F24J13.2... 45 0.002 tr|Q68Y53|Q68Y53_ORYSJ Putative uncharacterized protein P0022D06... 43 0.008 tr|A3B5T2|A3B5T2_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.008 tr|A5BSI0|A5BSI0_VITVI Putative uncharacterized protein OS=Vitis... 43 0.010 tr|B8AZY8|B8AZY8_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.013 tr|Q01C16|Q01C16_OSTTA Homology to unknown gene (Fragment) OS=Os... 40 0.085 tr|A9T1N3|A9T1N3_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.085 tr|A7QKM2|A7QKM2_VITVI Chromosome chr2 scaffold_113, whole genom... 38 0.32 tr|A5BQK3|A5BQK3_VITVI Putative uncharacterized protein OS=Vitis... 38 0.32 tr|A4S708|A4S708_OSTLU Predicted protein (Fragment) OS=Ostreococ... 38 0.32 tr|Q8VXZ5|Q8VXZ5_ARATH Putative uncharacterized protein At2g3561... 37 0.72 tr|A7PI01|A7PI01_VITVI Chromosome chr13 scaffold_17, whole genom... 36 0.94 tr|O49424|O49424_ARATH Putative uncharacterized protein AT4g1997... 35 1.6 tr|B6SWU4|B6SWU4_MAIZE Putative uncharacterized protein OS=Zea m... 35 2.7 tr|Q6A297|Q6A297_HAEIN DNA topoisomerase OS=Haemophilus influenz... 34 3.6 tr|Q8LFS2|Q8LFS2_ARATH Regulatory protein OS=Arabidopsis thalian... 34 3.6 tr|B1V6S1|B1V6S1_CLOPE Sortase family protein OS=Clostridium per... 34 4.7 tr|B4FJ90|B4FJ90_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.7 tr|A4RV30|A4RV30_OSTLU Predicted protein (Fragment) OS=Ostreococ... 34 4.7 tr|A2FGD6|A2FGD6_TRIVA Putative uncharacterized protein OS=Trich... 34 4.7 tr|Q147R7|Q147R7_ARATH At5g44820 OS=Arabidopsis thaliana PE=2 SV=1 33 6.1 tr|Q236J8|Q236J8_TETTH Calpain family cysteine protease containi... 33 6.1 tr|A1ZJY7|A1ZJY7_9SPHI Putative uncharacterized protein OS=Micro... 33 8.0
>tr|Q9FMN8|Q9FMN8_ARATH Genomic DNA, chromosome 5, P1 clone:MXC9 (At5g12260/MXC9_22) OS=Arabidopsis thaliana GN=At5g12260 PE=2 SV=1 Length = 624
Score = 80.1 bits (196), Expect = 6e-14 Identities = 50/136 (36%), Positives = 67/136 (49%) Frame = -2
Query: 508 LDQLKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFS 329 L LK YDFCF EV GR++ N + TI+PS + T+ILV G IRN LC F Sbjct: 354 LSNLKWYDFCFSEVVPGRVVRNLNELGTILPSVQREKTIILVSLYGADKMFIRNLLCHFE 413
Query: 328 KLSIRNFVILIQDRELEKSLLRQGHAVMHLAPELLEKEIRRTLKHPTLKDKIVYIERALT 149 KL+I+N + + EL L R+GH V+ A L K I+ +P ++ AL Sbjct: 414 KLNIQNHIFIGPSSELFHDLSRRGHPVID-ADMFLNKLIKSKTSYPN------SVKEALG 466
Query: 148 VIQAVTMITHSGYNIW 101 V GY+ W Sbjct: 467 NSYVVKKCLELGYSTW 482
>tr|A7PS85|A7PS85_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022805001 PE=4 SV=1 Length = 633
Score = 77.8 bits (190), Expect = 3e-13 Identities = 47/151 (31%), Positives = 80/151 (52%), Gaps = 2/151 (1%) Frame = -2
Query: 508 LDQLKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFS 329 L +LK YDFCF EV G ++ + + + +++ S ++ T+ILV G VIRN LC F Sbjct: 343 LTKLKWYDFCFKEVHPGTVVRSFEELGSVLHSVQKQDTIILVSLFGASERVIRNLLCHFE 402
Query: 328 KLSIRNFVILIQDRELEKSLLRQGHAVMHLAPELLEKEIRRTLKHPTLKDKIVYIERALT 149 +I+N++ + + + L R+GH V+ + L R K +L+D + +++ + Sbjct: 403 SFNIQNYIFMGLNSDFLLDLARRGHPVIDVDQFLSSV---RAHKMKSLQDSDMEVKKYIL 459
Query: 148 V-IQAVTMITHSGYNIWLTDVGTLWL-ANPF 62 V + SGYN W+ D L+L + PF Sbjct: 460 VKAYVIQKCLESGYNSWVVDGNMLFLRSTPF 490
>tr|A4Q7Q3|A4Q7Q3_MEDTR Sugar transporter superfamily OS=Medicago truncatula GN=MtrDRAFT_AC183502g15v2 PE=4 SV=1 Length = 622
Score = 69.7 bits (169), Expect = 8e-11 Identities = 32/90 (35%), Positives = 54/90 (60%) Frame = -2
Query: 508 LDQLKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFS 329 L LK +DFCF EV GR + N + + ++ S ++ +V LV+ +G V RN LC F Sbjct: 338 LSSLKWFDFCFREVLPGRFVRNLEELGALLHSMQKQDSVFLVNLLGVSDAVARNLLCHFE 397
Query: 328 KLSIRNFVILIQDRELEKSLLRQGHAVMHL 239 +L+IRN++++ + L R+GH V+++ Sbjct: 398 RLNIRNYILMAPPSDSLFDLARRGHPVINV 427
>tr|A2WNJ8|A2WNJ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01427 PE=4 SV=1 Length = 609
Score = 67.4 bits (163), Expect = 4e-10 Identities = 38/147 (25%), Positives = 71/147 (48%) Frame = -2
Query: 508 LDQLKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFS 329 L++LK YDFCF EV GR+I + +++ S + V+L+ + RN +C Sbjct: 324 LNKLKWYDFCFAEVLPGRVIRKFSELGSVLKSVQLENNVVLISLYSLEQRIARNLICHLE 383
Query: 328 KLSIRNFVILIQDRELEKSLLRQGHAVMHLAPELLEKEIRRTLKHPTLKDKIVYIERALT 149 K +RN++ L+ + E L +GH V+ L ++ ++ +IV +A Sbjct: 384 KSGMRNYIFLVDNTEFLDDLAHRGHPVIDAISLLQSIKMSSSIYSDDFVKEIVV--KAYV 441
Query: 148 VIQAVTMITHSGYNIWLTDVGTLWLAN 68 + + + GYN+W+ + T+ L + Sbjct: 442 IKNCLDL----GYNLWVLNGNTISLGS 464
>tr|Q9ARZ1|Q9ARZ1_ORYSJ OSJNBa0004B13.7 protein (Putative uncharacterized protein) (Os01g0283000 protein) (Putative uncharacterized protein P0581F09.17) OS=Oryza sativa subsp. japonica GN=OSJNBa0004B13.7 PE=4 SV=1 Length = 609
Score = 67.0 bits (162), Expect = 5e-10 Identities = 38/147 (25%), Positives = 71/147 (48%) Frame = -2
Query: 508 LDQLKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFS 329 L++LK YDFCF EV GR+I + +++ S + V+L+ + RN +C Sbjct: 324 LNKLKWYDFCFAEVLPGRVIRKFSELGSVLKSVQLENNVVLISLYSLEQRIARNLICYLE 383
Query: 328 KLSIRNFVILIQDRELEKSLLRQGHAVMHLAPELLEKEIRRTLKHPTLKDKIVYIERALT 149 K +RN++ L+ + E L +GH V+ L ++ ++ +IV +A Sbjct: 384 KSGMRNYIFLVDNTEFLDDLAHRGHPVIDAISLLQSIKMSSSIYSDDFVKEIVV--KAYV 441
Query: 148 VIQAVTMITHSGYNIWLTDVGTLWLAN 68 + + + GYN+W+ + T+ L + Sbjct: 442 IKNCLDL----GYNLWVLNGNTISLGS 464
>tr|A9TT64|A9TT64_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_2298 PE=4 SV=1 Length = 379
Score = 65.1 bits (157), Expect = 2e-09 Identities = 27/85 (31%), Positives = 50/85 (58%) Frame = -2
Query: 499 LKRYDFCFHEVKQGRLIENAQGVKTIVPSFEENGTVILVDAVGFRGEVIRNWLCQFSKLS 320 L ++DFCF ++ + + + ++ + E N +V+LV+ +G ++RNWLC +L Sbjct: 290 LPQFDFCFRGMQSWSVATSLAELSPMLAAMEMNMSVLLVNTIGVNAVLVRNWLCHMERLG 349
Query: 319 IRNFVILIQDRELEKSLLRQGHAVM 245 +R F+IL D E + L R+G+A + Sbjct: 350 LRKFIILGDDNEFSRDLARRGYATV 374
>tr|A7QXY4|A7QXY4_VITVI Chromosome undetermined scaffold_235, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009460001 PE=4 SV=1 Length = 663
Score = 47.8 bits (112), Expect = 3e-04 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%) Frame = -2
Query: 409 EENGTVILVDAVGFRGEVIRNWLCQFSKLSIRNFVILIQDRELEKSLLRQGHAVMH--LA 236 ++N T++L A +++ +W+C+ L I NFV+ D ++ + L QG V LA Sbjct: 384 DKNKTIVLAVAGYSYKDMLMSWVCRLRSLLITNFVVCALDHDVYQFSLLQGLPVFEDPLA 443
Query: 235 PELLEKEIRRTLKHPTLKDKIVYIERALTVIQAVTMITHSGYNIWLTDVGTLWLANPFPL 56 P + + T + V ++ V+Q + + GYN+ ++DV W NP PL Sbjct: 444 PSDISFD---DCHFGTKCFQRVTKSKSRLVLQILKL----GYNVLMSDVDVYWFKNPLPL 496
Query: 55 VH 50 ++ Sbjct: 497 LY 498
>tr|Q9S7C7|Q9S7C7_ARATH Putative uncharacterized protein F24J13.20 (Putative uncharacterized protein F5A18.19) OS=Arabidopsis thaliana GN=F5A18.19 PE=4 SV=1 Length = 535
Score = 45.4 bits (106), Expect = 0.002 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 1/128 (0%) Frame = -2
Query: 409 EENGTVILVDAVGFRGEVIRNWLCQFSKLSIRNFVILIQDRELEKSLLRQGHAVMHLAPE 230 ++N TV+L A +++ +W+C+ +L + NF++ D E + + QG P Sbjct: 268 DKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLVCALDDETYQFSILQG------LPV 321
Query: 229 LLEKEIRRTLKHPTLKDKIVYIERALTV-IQAVTMITHSGYNIWLTDVGTLWLANPFPLV 53 + + + +R V + V I GYN+ L+DV W NP PL+ Sbjct: 322 FFDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGYNVLLSDVDVYWFRNPLPLL 381
Query: 52 HIDNADIL 29 +L Sbjct: 382 QSFGPSVL 389
>tr|Q68Y53|Q68Y53_ORYSJ Putative uncharacterized protein P0022D06.1 OS=Oryza sativa subsp. japonica GN=P0022D06.1 PE=4 SV=1 Length = 765
Score = 43.1 bits (100), Expect = 0.008 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 6/126 (4%) Frame = -2
Query: 409 EENGTVILVDAVGFRGEVIRNWLCQFSKLSIRNFVILIQDRELEKSLLRQGHAVMHLAPE 230 ++N +V+L A +++ +W+C+ +L + NFV+ D+E + + QG V Sbjct: 476 DKNRSVVLAVAGASYRDMLMSWVCRLRRLRVTNFVVCALDQETYEFSVLQGMPVS----- 530
Query: 229 LLEKEIRRTLKHPTLKDKIVYIE----RALTVIQA--VTMITHSGYNIWLTDVGTLWLAN 68 R TL + + + +T +++ V I GYN+ L+DV W N Sbjct: 531 ------RDTLSPNNVSFDDCHFGTQCFQQVTKVKSRIVLKILRLGYNVLLSDVDVYWFHN 584
Query: 67 PFPLVH 50 P +H Sbjct: 585 PVSFLH 590
>tr|A3B5T2|A3B5T2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_018404 PE=4 SV=1 Length = 695
Score = 43.1 bits (100), Expect = 0.008 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 6/126 (4%) Frame = -2
Query: 409 EENGTVILVDAVGFRGEVIRNWLCQFSKLSIRNFVILIQDRELEKSLLRQGHAVMHLAPE 230 ++N +V+L A +++ +W+C+ +L + NFV+ D+E + + QG V Sbjct: 406 DKNRSVVLAVAGASYRDMLMSWVCRLRRLRVTNFVVCALDQETYEFSVLQGMPVS----- 460
Query: 229 LLEKEIRRTLKHPTLKDKIVYIE----RALTVIQA--VTMITHSGYNIWLTDVGTLWLAN 68 R TL + + + +T +++ V I GYN+ L+DV W N Sbjct: 461 ------RDTLSPNNVSFDDCHFGTQCFQQVTKVKSRIVLKILRLGYNVLLSDVDVYWFHN 514
Query: 67 PFPLVH 50 P +H Sbjct: 515 PVSFLH 520
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