BP921527
Clone id YMU001_000151_A08
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGCCCTTTGAAAGGCCTAATTCTATTCTGAAATGATAAGAAAAAGTAAGTCGCCCCTTCC
TTTGTCTTCATAGATCCCAGTTAGTTGTGCATGAGTCTAGCCTAGTTGTAAGAATAGGCA
TGAAACAGATGAGCAGGCTCTTTCAGGACATGAAAATAGTGTGAAATTTCAGAGTTCCAA
ACAATCAATTCCCGATAATGACAATATATAATTGGAATTGAGGGCTAAAATTAATCAGAG
TAGTTAGCGAGGGTTAATAGAATTGTACAGAAATCGGACAATTGTGAAGATGGGCAACGG
GGAAAAATGGGCTGGTGGTACCTGCCCAGCTTAGGGGGAGCAGGTAAACACTGGGCTATC
GCCACTGTAATTTGAGCCGTTGGAGGCAGCTTGCTTCAGCTGGTGGTCGATCTTCTCGTC
GGATCTGGCCTGCTGTTGATCCGTAGCGTGGCTGCAGCTGGAGCTGGCTGGGGGCGGCGA
CGTAAAGTCGAACATGCTCAACA
■■Homology search results ■■ -
sp_hit_id Q7YZH1
Definition sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila melanogaster
Align length 51
Score (bit) 30.0
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921527|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_A08.
(503 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila ... 30 6.4

>sp|Q7YZH1|RNO_DROME PHD finger protein rhinoceros OS=Drosophila
melanogaster GN=rno PE=1 SV=1
Length = 3241

Score = 30.0 bits (66), Expect = 6.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1

Query: 440 INSRPDPTRRSTTS*SKLPPTAQITVAIAQCLPAPPKLGRYHQPIFPRCPS 288
+ +P PT+R PP T A+A+ + P G P+ P C S
Sbjct: 28 VEPQPPPTKRRKGR----PPNGATTAAVAEVTGSGPATGSERVPVLPLCKS 74


tr_hit_id A6TP10
Definition tr|A6TP10|A6TP10_ALKMQ von Willebrand factor, type A OS=Alkaliphilus metalliredigens (strain QYMF)
Align length 113
Score (bit) 34.3
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921527|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_A08.
(503 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6TP10|A6TP10_ALKMQ von Willebrand factor, type A OS=Alkaliph... 34 3.4

>tr|A6TP10|A6TP10_ALKMQ von Willebrand factor, type A
OS=Alkaliphilus metalliredigens (strain QYMF)
GN=Amet_1755 PE=4 SV=1
Length = 551

Score = 34.3 bits (77), Expect = 3.4
Identities = 29/113 (25%), Positives = 51/113 (45%)
Frame = -2

Query: 484 YVAAPSQLQLQPRYGSTAGQIRREDRPPAEASCLQRLKLQWR*PSVYLLPLSWAGTTSPF 305
Y +P+ ++L+ Y + Q + + E+ + LK W + ++ S+AG S
Sbjct: 324 YFYSPTAVELEQIYKTVYDQQKEQYVLTYESQNINSLK-DWHYAMLRVIDESYAGELSKE 382

Query: 304 FPVAHLHNCPISVQFY*PSLTTLINFSPQFQLYIVIIGN*LFGTLKFHTIFMS 146
+ AH +N PI + F S+T PQ +++ N F L +H I S
Sbjct: 383 YIPAHDYNLPIELLF--SSVTASSTLEPQVEIFT----NLRFDYLPYHAIDQS 429