BP921530
Clone id YMU001_000151_B01
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTGAATAGTGTGGTATTGCATGTTCGATATCCTACATACCAAAGCAATTGAGAATTGGA
TTGATCAAGGGTGAATGAGCATAGGAGTGACCTTGAAATTTCAATGCGTTACACAGATAA
AAAGACATATACATCGTCCGTAATGAGGGGGAAAATGGAGAAAATACAAGACTTTCGTGT
ATCCCTGAAAAGCAGCGATCATGGCAGGTTTCTCTTCAGCCACGAAACGGATGGCGTCGC
CCATTTGTCAACAGGAAGATACGAGTCAATGTGTAAGCCATCAATGAAATGTCAATCAAT
ATGAACTCCACCAAAATAGCACCATAATGAAGTACTCTGGTGGGGAGGTGGCTTAGCTTC
TGTCAAGCCTCAAATGAAGAAGCATAATCTTGTAAATCACGAAAGTTCTTTTCTCCCTAT
TCTCCTGGCTT
■■Homology search results ■■ -
sp_hit_id Q6BQV7
Definition sp|Q6BQV7|GRC3_DEBHA Protein GRC3 OS=Debaryomyces hansenii
Align length 48
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921530|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B01.
(417 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6BQV7|GRC3_DEBHA Protein GRC3 OS=Debaryomyces hansenii GN=GR... 32 1.3
sp|P54697|MYOJ_DICDI Myosin IJ heavy chain OS=Dictyostelium disc... 29 6.4
sp|O74380|YNV5_SCHPO Uncharacterized membrane protein C3H7.05c O... 29 8.4
sp|Q0G9R5|NU5C_DAUCA NAD(P)H-quinone oxidoreductase subunit 5, c... 29 8.4
sp|Q9LXD7|MYST2_ARATH MYST-like histone acetyltransferase 2 OS=A... 29 8.4
sp|Q3SIG0|CHEB_THIDA Chemotaxis response regulator protein-gluta... 29 8.4

>sp|Q6BQV7|GRC3_DEBHA Protein GRC3 OS=Debaryomyces hansenii GN=GRC3
PE=3 SV=2
Length = 680

Score = 31.6 bits (70), Expect = 1.3
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2

Query: 203 HDRCFSGIHESLVFSPFSPSLRTMYMSFYLCNALK--FQGHSYAHSPL 66
+ RCF GI+++ +SPF + F+ + LK F H SPL
Sbjct: 426 NSRCFQGIYQTSKYSPFQLRMYNKLSYFHQVDTLKFDFNSHILLRSPL 473


>sp|P54697|MYOJ_DICDI Myosin IJ heavy chain OS=Dictyostelium
discoideum GN=myoJ PE=4 SV=2
Length = 2245

Score = 29.3 bits (64), Expect = 6.4
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +2

Query: 71 VNEHRSDLEISMRYTDKKTYTSSVMRGKMEKIQDFRVSLK 190
+ +H+S L+I ++ T++ ++GK+E+ QD + L+
Sbjct: 1244 LTDHKSKLQIQLQLTEQSNEKIKKLKGKLEEYQDEKKQLQ 1283


>sp|O74380|YNV5_SCHPO Uncharacterized membrane protein C3H7.05c
OS=Schizosaccharomyces pombe GN=SPBC3H7.05c PE=2 SV=1
Length = 357

Score = 28.9 bits (63), Expect = 8.4
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1

Query: 165 IFSIFPLITDDVYVFLSV*RIEISRSLLCSFT--LDQSNSQLLWYVGYRTCNT 13
+F++FPL T V F R +I+ +LLCS T L + +VGY+ +T
Sbjct: 22 LFNLFPLATYLVETFCFFRRWKIACTLLCSITVILAYRMCAVYHHVGYKDVST 74


>sp|Q0G9R5|NU5C_DAUCA NAD(P)H-quinone oxidoreductase subunit 5,
chloroplastic OS=Daucus carota GN=ndhF PE=3 SV=1
Length = 741

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = -1

Query: 282 DGLHIDSYLPVDKWATPSVSWLKRNLP*SLLFRDTRKSCIFSI 154
+G+ +D + KW TPS++ L +NL S+ + + K +FS+
Sbjct: 569 EGVRLDI---LSKWLTPSINLLHKNLNNSIGWYEFLKDALFSV 608


>sp|Q9LXD7|MYST2_ARATH MYST-like histone acetyltransferase 2
OS=Arabidopsis thaliana GN=HAG5 PE=2 SV=1
Length = 445

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3

Query: 166 YFLHFPPHYGRCICLFICVTH*NF 95
YF FPP Y C+ LF C NF
Sbjct: 188 YFSPFPPEYNDCVKLFFCEFCLNF 211


>sp|Q3SIG0|CHEB_THIDA Chemotaxis response regulator
protein-glutamate methylesterase OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=cheB PE=3 SV=1
Length = 356

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2

Query: 149 GKMEKIQDFRVSLKSSDHGRFLFSHETDGVAHLSTGRYESMCKPSMK 289
G E I+DF + L G + H +G R + +CK S+K
Sbjct: 171 GGTEAIKDFLMQLPPDSPGVLITQHMPEGFTRSFANRLDKLCKISVK 217


tr_hit_id Q97CF7
Definition tr|Q97CF7|Q97CF7_THEVO TVG0149603 protein OS=Thermoplasma volcanium
Align length 47
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921530|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B01.
(417 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q97CF7|Q97CF7_THEVO TVG0149603 protein OS=Thermoplasma volcan... 34 4.1
tr|A4HEJ0|A4HEJ0_LEIBR Putative uncharacterized protein OS=Leish... 33 9.2

>tr|Q97CF7|Q97CF7_THEVO TVG0149603 protein OS=Thermoplasma volcanium
GN=TV0144 PE=4 SV=1
Length = 131

Score = 33.9 bits (76), Expect = 4.1
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2

Query: 191 FSGIHESLVFSPFSPSLRTMYMSFYLCNALKFQGHSYAHSPLINPIL 51
+ I++S++F + L +Y+S +L N LK+ GH + P++ P++
Sbjct: 3 YQNIYKSILF--YVVGLALLYLSIFLSNILKYNGHFISALPIVLPLV 47


>tr|A4HEJ0|A4HEJ0_LEIBR Putative uncharacterized protein
OS=Leishmania braziliensis GN=LbrM25_V2.2470 PE=4 SV=1
Length = 1030

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = -2

Query: 164 FSPFSPSLRTMYMSFYLCNALKFQGHSYAHS 72
F+PFSPSL TM NA QGH Y+ S
Sbjct: 362 FAPFSPSLATMMAGNATANAWGGQGHQYSSS 392