BP921531
Clone id YMU001_000151_B02
Library
Length 410
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATACCTGCTTTGGAGTACTAACGCACGGAGACGACAAATCTCATGTGAGGAAAATCGAT
GCCACCATGCCAACAGAACGAGCTTTTGATGCATGTGTGACAGTCGGTGCTTGTTCCGGA
AGCTTCATGATATACATAGTGCCAGCTTCAGCTCATTGGAGAAGCTACTATAATATGTAG
CTTTTAGGTGCTTGGCTAGCTGGTTGCAGGCTGATCAGCTTCTTCTTTTACATTCCCATG
CAAAGAAGGCCAAGTGACCAATGTTAACAGAGTGAATGGGGCATGTTGCATTGTGTAGGG
GTAGAGCAAACTGCATAGCAAACTGTGGCAGGCCGCTTCTTGAACCCAACACCTACTTGA
ATGCTTTGCACGAACCACAGCCTTTAGCTTGAACTCCGACGCTCACTCCT
■■Homology search results ■■ -
sp_hit_id Q9FEL8
Definition sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1 OS=Medicago truncatula
Align length 22
Score (bit) 29.6
E-value 5.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921531|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B02.
(410 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1 OS=Medicag... 30 5.0
sp|Q8CBA2|SLFN5_MOUSE Schlafen family member 5 OS=Mus musculus G... 29 6.5
sp|Q29P71|MYO7A_DROPS Myosin-VIIa OS=Drosophila pseudoobscura ps... 29 6.5
sp|Q9V3Z6|MYO7A_DROME Myosin-VIIa OS=Drosophila melanogaster GN=... 29 6.5

>sp|Q9FEL8|LAX1_MEDTR Auxin transporter-like protein 1 OS=Medicago
truncatula GN=LAX1 PE=2 SV=1
Length = 479

Score = 29.6 bits (65), Expect = 5.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1

Query: 103 VGACSGSFMIYIVPASAHWRSY 168
VGA SF +Y++PASAH +Y
Sbjct: 379 VGALLVSFTVYVIPASAHMLTY 400


>sp|Q8CBA2|SLFN5_MOUSE Schlafen family member 5 OS=Mus musculus
GN=Slfn5 PE=2 SV=2
Length = 884

Score = 29.3 bits (64), Expect = 6.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -1

Query: 380 LWFVQSIQVGVGFKKRPATVCYAVCSTPTQCNMPHSLC*HWSLG 249
L F S V +G ++R +C A+ +P + +++C W LG
Sbjct: 415 LIFSHSWAVDLGLQRRQDVICDALLISPNNVPILYTICNKWDLG 458


>sp|Q29P71|MYO7A_DROPS Myosin-VIIa OS=Drosophila pseudoobscura
pseudoobscura GN=ck PE=3 SV=1
Length = 2168

Score = 29.3 bits (64), Expect = 6.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2

Query: 118 RNKHRLSHMHQKLV-LLAWWHRFSSHEICRLRALVLQSRY 2
RN + H HQ+L LL +H+ S E +L ALV + R+
Sbjct: 1961 RNADLIFHYHQELPKLLRGYHKCSREEAAKLAALVFRVRF 2000


>sp|Q9V3Z6|MYO7A_DROME Myosin-VIIa OS=Drosophila melanogaster GN=ck
PE=1 SV=1
Length = 2167

Score = 29.3 bits (64), Expect = 6.5
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2

Query: 118 RNKHRLSHMHQKLV-LLAWWHRFSSHEICRLRALVLQSRY 2
RN + H HQ+L LL +H+ S E +L ALV + R+
Sbjct: 1960 RNADLIFHYHQELPKLLRGYHKCSREEAAKLAALVFRVRF 1999


tr_hit_id B1YGN5
Definition tr|B1YGN5|B1YGN5_EXIS2 ABC transporter related OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
Align length 22
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921531|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B02.
(410 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1YGN5|B1YGN5_EXIS2 ABC transporter related OS=Exiguobacteriu... 33 9.3
tr|Q17Q00|Q17Q00_AEDAE DNA replication helicase dna2 (Fragment) ... 33 9.3

>tr|B1YGN5|B1YGN5_EXIS2 ABC transporter related OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=Exig_1583 PE=4 SV=1
Length = 519

Score = 32.7 bits (73), Expect = 9.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3

Query: 327 HSLLCSLLYPYTMQHAPFTLLT 262
H ++C LLYPYT++ P T+ T
Sbjct: 226 HGIMCPLLYPYTLETIPLTIAT 247


>tr|Q17Q00|Q17Q00_AEDAE DNA replication helicase dna2 (Fragment)
OS=Aedes aegypti GN=AAEL000201 PE=4 SV=1
Length = 1097

Score = 32.7 bits (73), Expect = 9.3
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Frame = -1

Query: 308 CSTPTQCNMPHSLC*HWSLGLLCMGM*KKKLIS-------LQPASQAPKSYIL**LLQ*A 150
CSTP + ++ H +G+ C+G L+ + A+Q +S ++ LL
Sbjct: 721 CSTPEELAAVYNS--HQIVGVTCLGADHPMLVQRTFDFCIVDEATQVFQSAVIRPLLS-- 776

Query: 149 EAGTMYIMKLPEQAPTVTHASKARSVGMVASIFLT*DLSSPCVSTPKQ 6
+ ++ P+Q P V + KA+ +G S+F D C P Q
Sbjct: 777 -SDKFVLIGDPDQLPPVIKSRKAKDLGADESLFFRLDAEQSCCVLPTQ 823