BP921532
Clone id YMU001_000151_B03
Library
Length 357
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000151_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATCGTGTGCCAGTTTTTATGTTACTTCTCACAAGGAATGATTCTCTAATTATGCTTCCAC
ATGTAGTTTAGTTAAGTTGGGTGATTCTCATCATTTAGAGATATGTGGCATTGGAGATGT
GACGTTGTGTATGCGCAACGGAACTGAGTTCATGCTGCGAGGTGTTAAGACATGTGCCAA
AGCTACCAAAGAGCTTGGTTGCAGTAGGACAGCTTGATAGATCTTGAGATACACGTAAAT
TGTTTGGCAATGGTTCCTCGGATTATCAGAAAAGGTAACTTCGTCATGCTCAAAGGCCAA
AAGTCTGGCTCATTATATACTTGGTATGTCTCTTCTGTGAAAGAGAACTCTATCTAT
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 57
Score (bit) 31.2
E-value 0.65
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921532|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B03.
(357 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 31 0.65
sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo sap... 31 2.2
sp|O52352|KAD_MYCGA Adenylate kinase OS=Mycoplasma gallisepticum... 29 6.5
sp|P34732|SEC18_CANAL Vesicular-fusion protein SEC18 OS=Candida ... 29 8.4

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 31.2 bits (69), Expect(2) = 0.65
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
+ AS + T ++ F Y A VK+G++ + +I GIGD+ + G +L+ V+
Sbjct: 298 TAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVR 354



Score = 20.8 bits (42), Expect(2) = 0.65
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG+ V+ KG G+LY
Sbjct: 385 LTKGSLVIAKGVARGTLY 402


>sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo
sapiens PE=2 SV=2
Length = 544

Score = 30.8 bits (68), Expect = 2.2
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Frame = -3

Query: 253 PLPNNLRVSQDLSSCPTATKL-----FGSFGTCLNTSQHELSSVAHTQRHISNATYL*M- 92
P+PNNL ++Q+ C L G +HE + + ISN T
Sbjct: 282 PVPNNLHMAQNACECNKDETLCHQSSLKKQGQTHTEKKHECNQCGKAFKRISNLTLYKKS 341

Query: 91 -MRITQLN*TTCGSIIRESFLVRSNIKTGT 5
M Q CG + +S +R +++T T
Sbjct: 342 HMGEKQYECKECGKVFNDSSTLRRHVRTHT 371


>sp|O52352|KAD_MYCGA Adenylate kinase OS=Mycoplasma gallisepticum
GN=adk PE=3 SV=2
Length = 214

Score = 29.3 bits (64), Expect = 6.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1

Query: 285 DEVTFSDNPR--NHCQTIYVYLKIYQAVLLQPSSLVALAHVLTPRSMNSVPLRIHNVTS 115
D++ F PR N C+ I +K +LLQP+ + + L+ R RI+N+ S
Sbjct: 81 DKIIFDGYPRTLNQCEYIDEIIKFTHVILLQPTDWDMIINRLSLRRSCPQCKRIYNINS 139


>sp|P34732|SEC18_CANAL Vesicular-fusion protein SEC18 OS=Candida
albicans GN=SEC18 PE=3 SV=2
Length = 794

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -1

Query: 270 SDNPRNHCQTIYVYLKIYQAVLLQPSSLVALAH 172
+ NP NH + + ++LK Y+ +LQP+ ++ + +
Sbjct: 152 NSNPINHDELVALFLKNYENQILQPTQVIYMEY 184


tr_hit_id A5AKY6
Definition tr|A5AKY6|A5AKY6_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 57
Score (bit) 42.0
E-value 2.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP921532|Adiantum capillus-veneris mRNA, clone:
YMU001_000151_B03.
(357 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AKY6|A5AKY6_VITVI Putative uncharacterized protein OS=Vitis... 42 2e-06
tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5B0C8|A5B0C8_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5BPB3|A5BPB3_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A5AQN2|A5AQN2_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-06
tr|A7QG92|A7QG92_VITVI Chromosome undetermined scaffold_91, whol... 41 4e-06
tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, wh... 41 4e-06
tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 41 4e-06
tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 41 4e-06
tr|A5BWL7|A5BWL7_VITVI Putative uncharacterized protein OS=Vitis... 41 4e-06
tr|A5ASH8|A5ASH8_VITVI Putative uncharacterized protein OS=Vitis... 41 5e-06
tr|A7NUU2|A7NUU2_VITVI Chromosome chr18 scaffold_1, whole genome... 41 5e-06
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 41 7e-06
tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis... 40 7e-06
tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis... 40 7e-06
tr|A5AK46|A5AK46_VITVI Putative uncharacterized protein OS=Vitis... 41 7e-06
tr|A5ATI4|A5ATI4_VITVI Putative uncharacterized protein OS=Vitis... 40 1e-05
tr|A5AN26|A5AN26_VITVI Putative uncharacterized protein OS=Vitis... 39 2e-05
tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 38 3e-05
tr|A5BPZ5|A5BPZ5_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-05
tr|A7P0C8|A7P0C8_VITVI Chromosome chr6 scaffold_3, whole genome ... 41 3e-05
tr|A7Q4Q2|A7Q4Q2_VITVI Chromosome chr10 scaffold_50, whole genom... 42 3e-05
tr|A5APH6|A5APH6_VITVI Putative uncharacterized protein OS=Vitis... 38 3e-05
tr|A5BFU1|A5BFU1_VITVI Putative uncharacterized protein OS=Vitis... 41 3e-05

>tr|A5AKY6|A5AKY6_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034722 PE=4 SV=1
Length = 1056

Score = 42.0 bits (97), Expect(3) = 2e-06
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY AS V L D L++ G+GDV + + NG ++L V+
Sbjct: 253 SRASFHTTPHREIIQNYAASEFGKVYLADGSALDVVGLGDVRISLPNGXVWLLEKVR 309



Score = 29.3 bits (64), Expect(3) = 2e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 306 EKVRHIPDLRRNLISVGQLD 325



Score = 22.3 bits (46), Expect(3) = 2e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 340 VTKGARVLARGKKTGTLY 357


>tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_024822 PE=4 SV=1
Length = 1250

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 290 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 346



Score = 29.6 bits (65), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 343 EKVRHIPDLKRNLISVGQLD 362



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 377 VTKGARVLARGKKTGTLY 394


>tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_040966 PE=4 SV=1
Length = 1212

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 290 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 346



Score = 29.6 bits (65), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 343 EKVRHIPDLXRNLISVGQLD 362



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 377 VTKGARVLARGKKTGTLY 394


>tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008497 PE=4 SV=1
Length = 1149

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L+I G+GDV + + NG+ ++L V+
Sbjct: 253 SGASFHTTPHREIIQNYVAGGFGKVYLADGSALDIVGLGDVRISLPNGSVWLLEKVR 309



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 306 EKVRHIPDLRRNLISVGQLD 325



Score = 22.7 bits (47), Expect(3) = 3e-06
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLYTWYVSSVKENSI 354
+ KG V+ +G+K+G+L Y++S N+I
Sbjct: 340 VTKGARVLARGKKTGTL---YMTSCPRNTI 366


>tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043524 PE=4 SV=1
Length = 1535

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2

Query: 8 ASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 559 ASFHTTPHREIIQNYVAGDFGKVYLADGSXLDVVGLGDVRISLPNGSVWLLEKVR 613



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 610 EKVRHIPDLRRNLISVGQLD 629



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 644 VTKGARVLARGKKTGTLY 661


>tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043997 PE=4 SV=1
Length = 1269

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 290 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 346



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 343 EKVRHIPDLRRNLISVGQLD 362



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 377 VTKGARVLARGKKTGTLY 394


>tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001479 PE=4 SV=1
Length = 1246

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 262 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 318



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 315 EKVRHIPDLRRNLISVGQLD 334



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 349 VTKGARVLARGKKTGTLY 366


>tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003944 PE=4 SV=1
Length = 1236

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 290 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 346



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 343 EKVRHIPDLRRNLISVGQLD 362



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 377 VTKGARVLARGKKTGTLY 394


>tr|A5B0C8|A5B0C8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015834 PE=4 SV=1
Length = 1186

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 59 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 115



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 112 EKVRHIPDLRRNLISVGQLD 131



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 146 VTKGARVLARGKKTGTLY 163


>tr|A5BPB3|A5BPB3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034935 PE=4 SV=1
Length = 1137

Score = 41.2 bits (95), Expect(3) = 3e-06
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2

Query: 2 SCASFYVTSHKE*FSNY-ASTCSLVKLGDSHHLEICGIGDVTLCMRNGTEFMLRGVK 169
S ASF+ T H+E NY A V L D L++ G+GDV + + NG+ ++L V+
Sbjct: 244 SGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVR 300



Score = 29.3 bits (64), Expect(3) = 3e-06
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +3

Query: 159 EVLRHVPKLPKSLVAVGQLD 218
E +RH+P L ++L++VGQLD
Sbjct: 297 EKVRHIPDLRRNLISVGQLD 316



Score = 22.3 bits (46), Expect(3) = 3e-06
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +1

Query: 265 IRKGNFVMLKGQKSGSLY 318
+ KG V+ +G+K+G+LY
Sbjct: 331 VTKGARVLARGKKTGTLY 348